RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 OR5T1Q8NG75 326 aa17.36■□□□□ 0.37
HOXC8-201ENST00000040584 ARPC1AQ92747 370 aa17.36■□□□□ 0.37
HOXC8-201ENST00000040584 SRSF8Q9BRL6 282 aaKnown RBP17.36■□□□□ 0.37
HOXC8-201ENST00000040584 TMUB1Q9BVT8 246 aa17.36■□□□□ 0.37
HOXC8-201ENST00000040584 PRDM13Q9H4Q3 707 aa17.36■□□□□ 0.37
HOXC8-201ENST00000040584 SEPSECSQ9HD40 501 aaKnown RBP17.36■□□□□ 0.37
HOXC8-201ENST00000040584 TECRQ9NZ01 308 aaKnown RBP17.36■□□□□ 0.37
HOXC8-201ENST00000040584 FUT9Q9Y231 359 aa17.36■□□□□ 0.37
HOXC8-201ENST00000040584 LINC00869P0C866 280 aa17.35■□□□□ 0.37
HOXC8-201ENST00000040584 HNF1AP20823 631 aa17.35■□□□□ 0.37
HOXC8-201ENST00000040584 GPX4P36969 197 aaPredicted RBP17.35■□□□□ 0.37
HOXC8-201ENST00000040584 TAS2R45P59539 299 aa17.35■□□□□ 0.37
HOXC8-201ENST00000040584 SIGLECL1Q8N7X8 197 aa17.35■□□□□ 0.37
HOXC8-201ENST00000040584 RNF2Q99496 336 aa17.35■□□□□ 0.37
HOXC8-201ENST00000040584 HOXA3O43365 443 aaPredicted RBP17.35■□□□□ 0.37
HOXC8-201ENST00000040584 PQLC2Q6ZP29 291 aa17.35■□□□□ 0.37
HOXC8-201ENST00000040584 C19orf35Q6ZS72 473 aa17.35■□□□□ 0.37
HOXC8-201ENST00000040584 OR10G8Q8NGN5 311 aa17.35■□□□□ 0.37
HOXC8-201ENST00000040584 GATCO43716 136 aaKnown RBP17.34■□□□□ 0.37
HOXC8-201ENST00000040584 ZNF114Q8NC26 417 aa17.34■□□□□ 0.37
HOXC8-201ENST00000040584 YTHDF2Q9Y5A9 579 aaKnown RBP17.34■□□□□ 0.37
HOXC8-201ENST00000040584 ZNF320A2RRD8 509 aa17.33■□□□□ 0.37
HOXC8-201ENST00000040584 LINC01548A6NM66 108 aa17.33■□□□□ 0.37
HOXC8-201ENST00000040584 EGR2P11161 476 aaPredicted RBP17.33■□□□□ 0.37
HOXC8-201ENST00000040584 JOSD1Q15040 202 aaPredicted RBP17.33■□□□□ 0.37
HOXC8-201ENST00000040584 DERL1Q9BUN8 251 aa17.33■□□□□ 0.37
HOXC8-201ENST00000040584 SCO2A0A1W2PP80 73 aa17.33■□□□□ 0.36
HOXC8-201ENST00000040584 GCGP01275 180 aa17.33■□□□□ 0.36
HOXC8-201ENST00000040584 LURAP1LQ8IV03 231 aa17.33■□□□□ 0.36
HOXC8-201ENST00000040584 SGMS2Q8NHU3 365 aa17.33■□□□□ 0.36
HOXC8-201ENST00000040584 OCC1Q8TAD7 63 aa17.33■□□□□ 0.36
HOXC8-201ENST00000040584 TMEM37Q8WXS4 190 aa17.33■□□□□ 0.36
HOXC8-201ENST00000040584 TMEM160Q9NX00 188 aa17.33■□□□□ 0.36
HOXC8-201ENST00000040584 TRAPPC1Q9Y5R8 145 aa17.33■□□□□ 0.36
HOXC8-201ENST00000040584 CNN1P51911 297 aaKnown RBP17.32■□□□□ 0.36
HOXC8-201ENST00000040584 SUB1P53999 127 aaKnown RBP eCLIP17.32■□□□□ 0.36
HOXC8-201ENST00000040584 RPL19P84098 196 aaKnown RBP17.32■□□□□ 0.36
HOXC8-201ENST00000040584 PVRIGQ6DKI7 326 aa17.32■□□□□ 0.36
HOXC8-201ENST00000040584 Q71RC1 249 aaPredicted RBP17.32■□□□□ 0.36
HOXC8-201ENST00000040584 TMEM18Q96B42 140 aa17.32■□□□□ 0.36
HOXC8-201ENST00000040584 VPREB3Q9UKI3 123 aa17.32■□□□□ 0.36
HOXC8-201ENST00000040584 HIVEP1P15822 2718 aa17.32■□□□□ 0.36
HOXC8-201ENST00000040584 CYSRT1A8MQ03 144 aa17.31■□□□□ 0.36
HOXC8-201ENST00000040584 M0QZK8 103 aa17.31■□□□□ 0.36
HOXC8-201ENST00000040584 RPL15P61313 204 aaKnown RBP17.31■□□□□ 0.36
HOXC8-201ENST00000040584 PKIAP61925 76 aa17.31■□□□□ 0.36
HOXC8-201ENST00000040584 BLCAPP62952 87 aa17.31■□□□□ 0.36
HOXC8-201ENST00000040584 CD69Q07108 199 aa17.31■□□□□ 0.36
HOXC8-201ENST00000040584 C9orf152Q5JTZ5 239 aa17.31■□□□□ 0.36
HOXC8-201ENST00000040584 ASPHD1Q5U4P2 390 aa17.31■□□□□ 0.36
HOXC8-201ENST00000040584 TEX38Q6PEX7 206 aa17.31■□□□□ 0.36
HOXC8-201ENST00000040584 MRPL32Q9BYC8 188 aaKnown RBP17.31■□□□□ 0.36
HOXC8-201ENST00000040584 ATP6V0E1O15342 81 aa17.31■□□□□ 0.36
HOXC8-201ENST00000040584 AMBPP02760 352 aa17.31■□□□□ 0.36
HOXC8-201ENST00000040584 OR5G3P0C626 314 aa17.31■□□□□ 0.36
HOXC8-201ENST00000040584 GAMTQ14353 236 aa17.31■□□□□ 0.36
HOXC8-201ENST00000040584 DUX5Q96PT3 197 aa17.31■□□□□ 0.36
HOXC8-201ENST00000040584 FOSL1P15407 271 aa17.3■□□□□ 0.36
HOXC8-201ENST00000040584 YPEL3P61236 119 aaPredicted RBP17.3■□□□□ 0.36
HOXC8-201ENST00000040584 IL36BQ9NZH7 164 aa17.3■□□□□ 0.36
HOXC8-201ENST00000040584 HIVEP2P31629 2446 aa17.3■□□□□ 0.36
HOXC8-201ENST00000040584 TRBV20OR9-2A0A075B6H5 130 aa17.29■□□□□ 0.36
HOXC8-201ENST00000040584 TSTD3H0UI37 97 aa17.29■□□□□ 0.36
HOXC8-201ENST00000040584 MFAP2P55001 183 aa17.29■□□□□ 0.36
HOXC8-201ENST00000040584 SPATA31B1PQ5VZV4 182 aa17.29■□□□□ 0.36
HOXC8-201ENST00000040584 Q6ZS46 218 aa17.29■□□□□ 0.36
HOXC8-201ENST00000040584 GSX1Q9H4S2 264 aaPredicted RBP17.29■□□□□ 0.36
HOXC8-201ENST00000040584 F11RQ9Y624 299 aaKnown RBP17.29■□□□□ 0.36
HOXC8-201ENST00000040584 OR10J1P30954 320 aa17.29■□□□□ 0.36
HOXC8-201ENST00000040584 MIR17HGQ75NE6 70 aa17.29■□□□□ 0.36
HOXC8-201ENST00000040584 WNT10AQ9GZT5 417 aa17.29■□□□□ 0.36
HOXC8-201ENST00000040584 A0A1W2PRE2 83 aa17.28■□□□□ 0.36
HOXC8-201ENST00000040584 HELTA6NFD8 242 aa17.28■□□□□ 0.36
HOXC8-201ENST00000040584 MLANAQ16655 118 aa17.28■□□□□ 0.36
HOXC8-201ENST00000040584 MTORP42345 2549 aa17.27■□□□□ 0.36
HOXC8-201ENST00000040584 CRYGCP07315 174 aa17.27■□□□□ 0.36
HOXC8-201ENST00000040584 C8orf88P0DMB2 117 aa17.27■□□□□ 0.36
HOXC8-201ENST00000040584 ECSCRQ19T08 205 aa17.27■□□□□ 0.36
HOXC8-201ENST00000040584 NPIPB5A8MRT5 1133 aa17.27■□□□□ 0.35
HOXC8-201ENST00000040584 OR10J4P0C629 311 aa17.27■□□□□ 0.35
HOXC8-201ENST00000040584 DEFA6Q01524 100 aa17.27■□□□□ 0.35
HOXC8-201ENST00000040584 AURKAIP1Q9NWT8 199 aaPredicted RBP17.27■□□□□ 0.35
HOXC8-201ENST00000040584 G3V318 75 aa17.26■□□□□ 0.35
HOXC8-201ENST00000040584 SRD5A1P18405 259 aa17.26■□□□□ 0.35
HOXC8-201ENST00000040584 ZNF90Q03938 601 aa17.26■□□□□ 0.35
HOXC8-201ENST00000040584 COX19Q49B96 90 aa17.26■□□□□ 0.35
HOXC8-201ENST00000040584 FAM209BQ5JX69 171 aa17.26■□□□□ 0.35
HOXC8-201ENST00000040584 UNQ5815/PRO19632Q6UWF5 114 aa17.26■□□□□ 0.35
HOXC8-201ENST00000040584 TTC9CQ8N5M4 171 aa17.26■□□□□ 0.35
HOXC8-201ENST00000040584 MISP3Q96FF7 219 aa17.26■□□□□ 0.35
HOXC8-201ENST00000040584 FNDC4Q9H6D8 234 aaPredicted RBP17.26■□□□□ 0.35
HOXC8-201ENST00000040584 LINC00527Q9UJ94 153 aa17.26■□□□□ 0.35
HOXC8-201ENST00000040584 PGPEP1LA6NFU8 196 aa17.25■□□□□ 0.35
HOXC8-201ENST00000040584 IGHG2P01859 326 aa17.25■□□□□ 0.35
HOXC8-201ENST00000040584 OR1L4Q8NGR5 311 aa17.25■□□□□ 0.35
HOXC8-201ENST00000040584 CDC42EP3Q9UKI2 254 aa17.25■□□□□ 0.35
HOXC8-201ENST00000040584 TRBV9A0A0B4J1U6 114 aa17.24■□□□□ 0.35
HOXC8-201ENST00000040584 GNG4P50150 75 aa17.24■□□□□ 0.35
HOXC8-201ENST00000040584 DNAJC4Q9NNZ3 241 aa17.24■□□□□ 0.35
HOXC8-201ENST00000040584 IGKV1OR2-108A0A075B7D4 117 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms