RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 DSCAML1Q8TD84 2053 aa8.49□□□□□ -1.05
CX3CL1-201ENST00000006053 IGHV3-21A0A0B4J1V1 117 aa8.49□□□□□ -1.05
CX3CL1-201ENST00000006053 APELAP0DMC3 54 aa8.49□□□□□ -1.05
CX3CL1-201ENST00000006053 WT1P19544 449 aaPredicted RBP8.49□□□□□ -1.05
CX3CL1-201ENST00000006053 WT1-ASQ06250 92 aa8.49□□□□□ -1.05
CX3CL1-201ENST00000006053 FAM231DQ6ZW35 169 aa8.49□□□□□ -1.05
CX3CL1-201ENST00000006053 PDPNQ86YL7 162 aa8.49□□□□□ -1.05
CX3CL1-201ENST00000006053 OR8B3Q8NGG8 313 aa8.49□□□□□ -1.05
CX3CL1-201ENST00000006053 FLYWCH2Q96CP2 140 aaKnown RBP8.49□□□□□ -1.05
CX3CL1-201ENST00000006053 TRAV17A0A0B4J275 112 aa8.49□□□□□ -1.05
CX3CL1-201ENST00000006053 hADV38S2A0JD32 116 aa8.49□□□□□ -1.05
CX3CL1-201ENST00000006053 IGHV1-46P01743 117 aa8.49□□□□□ -1.05
CX3CL1-201ENST00000006053 ATP5IP56385 69 aaPredicted RBP8.49□□□□□ -1.05
CX3CL1-201ENST00000006053 CKS1BP61024 79 aa8.49□□□□□ -1.05
CX3CL1-201ENST00000006053 CCL8P80075 99 aa8.49□□□□□ -1.05
CX3CL1-201ENST00000006053 DIAPH2-AS1Q14236 149 aa8.49□□□□□ -1.05
CX3CL1-201ENST00000006053 RASL11AQ6T310 242 aa8.49□□□□□ -1.05
CX3CL1-201ENST00000006053 C5orf17Q8NAS9 161 aa8.49□□□□□ -1.05
CX3CL1-201ENST00000006053 FXYD5Q96DB9 178 aa8.49□□□□□ -1.05
CX3CL1-201ENST00000006053 SPENQ96T58 3664 aaKnown RBP8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 C2orf70A6NJV1 201 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 H0Y8G0 127 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 FTH1P19P0C7X4 201 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 FAM71F2Q6NXP2 309 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 ZNF474Q6S9Z5 364 aaPredicted RBP8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 ZNF788Q6ZQV5 615 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 RPRMLQ8N4K4 120 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 OSR1Q8TAX0 266 aaPredicted RBP8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 FAM222BQ8WU58 562 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 PGLYRP4Q96LB8 373 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 CHRDL1Q9BU40 450 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 SSUH2Q9Y2M2 353 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 TANC2Q9HCD6 1990 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 TRAV8-6A0A0B4J262 113 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 MUC21A0A0G2JKD1 596 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 MUC21A0A140T8X8 626 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 TCRBV4S1A1TA0A5B7 111 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 H0YJW9 148 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 MUC21Q5SSG8 566 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 HCP5Q6MZN7 132 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 LINC00173Q6ZV60 143 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 SEM1Q6ZVN7 128 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 ZCCHC24Q8N2G6 241 aaKnown RBP8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 TMEM70Q9BUB7 260 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 THYN1Q9P016 225 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 EPDR1Q9UM22 224 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 ZNF292O60281 2723 aa8.48□□□□□ -1.05
CX3CL1-201ENST00000006053 OR4C46A6NHA9 309 aa8.47□□□□□ -1.05
CX3CL1-201ENST00000006053 PPIAL4GP0DN37 164 aa8.47□□□□□ -1.05
CX3CL1-201ENST00000006053 KLF5Q13887 457 aaPredicted RBP8.47□□□□□ -1.05
CX3CL1-201ENST00000006053 IGF2-ASQ6U949 168 aa8.47□□□□□ -1.05
CX3CL1-201ENST00000006053 SSX8Q7RTT4 187 aa8.47□□□□□ -1.05
CX3CL1-201ENST00000006053 OR10X1Q8NGY0 326 aa8.47□□□□□ -1.05
CX3CL1-201ENST00000006053 H1FXQ92522 213 aaKnown RBP8.47□□□□□ -1.05
CX3CL1-201ENST00000006053 LINC00322Q6ZN03 302 aaPredicted RBP8.47□□□□□ -1.05
CX3CL1-201ENST00000006053 MCRIP2Q9BUT9 160 aaKnown RBP8.47□□□□□ -1.05
CX3CL1-201ENST00000006053 IGKV1D-37A0A075B6S9 117 aa8.47□□□□□ -1.05
CX3CL1-201ENST00000006053 hDV102S1A0JD36 115 aa8.47□□□□□ -1.05
CX3CL1-201ENST00000006053 CA7P43166 264 aa8.47□□□□□ -1.05
CX3CL1-201ENST00000006053 SUB1P53999 127 aaKnown RBP eCLIP8.47□□□□□ -1.05
CX3CL1-201ENST00000006053 HBBP68871 147 aa8.47□□□□□ -1.05
CX3CL1-201ENST00000006053 RPL24P83731 157 aaKnown RBP8.47□□□□□ -1.05
CX3CL1-201ENST00000006053 TIMM23BQ5SRD1 257 aa8.47□□□□□ -1.05
CX3CL1-201ENST00000006053 MUC15Q8N387 334 aa8.47□□□□□ -1.05
CX3CL1-201ENST00000006053 URB1-AS1Q96HZ7 61 aa8.47□□□□□ -1.05
CX3CL1-201ENST00000006053 ADGRG4Q8IZF6 3080 aa8.46□□□□□ -1.05
CX3CL1-201ENST00000006053 TM4SF5O14894 197 aa8.46□□□□□ -1.05
CX3CL1-201ENST00000006053 OR2J3O76001 311 aa8.46□□□□□ -1.05
CX3CL1-201ENST00000006053 PRB4P10163 310 aaPredicted RBP8.46□□□□□ -1.05
CX3CL1-201ENST00000006053 TMEM177Q53S58 311 aa8.46□□□□□ -1.05
CX3CL1-201ENST00000006053 ZNF833PQ6ZTB9 187 aa8.46□□□□□ -1.05
CX3CL1-201ENST00000006053 DAZAP1Q96EP5 407 aaKnown RBP8.46□□□□□ -1.05
CX3CL1-201ENST00000006053 ZNF835Q9Y2P0 537 aa8.46□□□□□ -1.05
CX3CL1-201ENST00000006053 RAI1Q7Z5J4 1906 aaPredicted RBP8.46□□□□□ -1.05
CX3CL1-201ENST00000006053 IGLV3-9A0A075B6K5 115 aa8.46□□□□□ -1.06
CX3CL1-201ENST00000006053 IGHV3-72A0A0B4J1Y9 119 aa8.46□□□□□ -1.06
CX3CL1-201ENST00000006053 ENSAO43768 121 aaKnown RBP8.46□□□□□ -1.06
CX3CL1-201ENST00000006053 P01737 135 aa8.46□□□□□ -1.06
CX3CL1-201ENST00000006053 GATA4P43694 442 aa8.46□□□□□ -1.06
CX3CL1-201ENST00000006053 DEFB109BQ30KR1 87 aa8.46□□□□□ -1.06
CX3CL1-201ENST00000006053 RUSC1-AS1Q66K80 236 aa8.46□□□□□ -1.06
CX3CL1-201ENST00000006053 OR4F17Q8NGA8 305 aa8.46□□□□□ -1.06
CX3CL1-201ENST00000006053 GPR82Q96P67 336 aa8.46□□□□□ -1.06
CX3CL1-201ENST00000006053 AP1S3Q96PC3 154 aa8.46□□□□□ -1.06
CX3CL1-201ENST00000006053 SIGMAR1Q99720 223 aa8.46□□□□□ -1.06
CX3CL1-201ENST00000006053 RPP21Q9H633 154 aaKnown RBP8.46□□□□□ -1.06
CX3CL1-201ENST00000006053 TPSG1Q9NRR2 321 aa8.46□□□□□ -1.06
CX3CL1-201ENST00000006053 CGB1A6NKQ9 187 aa8.46□□□□□ -1.06
CX3CL1-201ENST00000006053 LEPROTL1O95214 131 aa8.46□□□□□ -1.06
CX3CL1-201ENST00000006053 ZNF138P52744 262 aa8.46□□□□□ -1.06
CX3CL1-201ENST00000006053 FAM169BQ8N8A8 192 aa8.46□□□□□ -1.06
CX3CL1-201ENST00000006053 OR4C13Q8NGP0 309 aa8.46□□□□□ -1.06
CX3CL1-201ENST00000006053 PERPQ96FX8 193 aa8.46□□□□□ -1.06
CX3CL1-201ENST00000006053 C7orf69Q9H7B7 122 aa8.46□□□□□ -1.06
CX3CL1-201ENST00000006053 LINC00312Q9Y6C7 94 aa8.46□□□□□ -1.06
CX3CL1-201ENST00000006053 DYSFO75923 2080 aa8.45□□□□□ -1.06
CX3CL1-201ENST00000006053 PLP1P60201 277 aa8.45□□□□□ -1.06
CX3CL1-201ENST00000006053 C22orf34Q6ZV56 151 aa8.45□□□□□ -1.06
CX3CL1-201ENST00000006053 ATP5L2Q7Z4Y8 100 aa8.45□□□□□ -1.06
CX3CL1-201ENST00000006053 CITED1Q99966 193 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms