RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 TET3O43151 1660 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 ABCC2Q92887 1545 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 PLXNA4Q9HCM2 1894 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 TRAV12-2A0A075B6T6 113 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 TRGV10A0A0A0MS01 117 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 IGKV6D-21A0A0A0MT36 114 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 TRAV13-1A0A0B4J241 112 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 IGKV3D-20A0A0C4DH25 116 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 A0A0D9SEW6 157 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 ODAMA1E959 279 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 NDUFAF8A1L188 74 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 OR2T8A6NH00 312 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 ZNF860A6NHJ4 632 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 TMEM262E9PQX1 116 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 KRTAP4-16G5E9R7 235 aaPredicted RBP2.12□□□□□ -2.07
PSPC1-208ENST00000635562 GEMIN2O14893 280 aaKnown RBP2.12□□□□□ -2.07
PSPC1-208ENST00000635562 UQCRQO14949 82 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 ZNF253O75346 499 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 NDUFB2O95178 105 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 BGLAPP02818 100 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 HLA-DPB1P04440 258 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 CHTF8P0CG12 524 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 ZNF883P0CG24 379 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 PYYP10082 97 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 CRYGAP11844 174 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 FABP2P12104 132 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 ZNF823P16415 610 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 LGALS3P17931 250 aaKnown RBP2.12□□□□□ -2.07
PSPC1-208ENST00000635562 NOVP48745 357 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 ZNF90Q03938 601 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 EGFEM1PQ0D2K5 195 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 EBI3Q14213 229 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 RSPO1Q2MKA7 263 aaPredicted RBP2.12□□□□□ -2.07
PSPC1-208ENST00000635562 KHDC3LQ587J8 217 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 MRPL54Q6P161 138 aaKnown RBP2.12□□□□□ -2.07
PSPC1-208ENST00000635562 REG3GQ6UW15 175 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 ZNF705AQ6ZN79 300 aaPredicted RBP2.12□□□□□ -2.07
PSPC1-208ENST00000635562 PHF5AQ7RTV0 110 aaKnown RBP2.12□□□□□ -2.07
PSPC1-208ENST00000635562 GTSCR1Q86UQ5 136 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 TEN1Q86WV5 123 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 C10orf111Q8N326 155 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 C10orf126Q8N4M7 172 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 TMEM252Q8N6L7 170 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 APCDD1LQ8NCL9 501 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 MAPK1IP1LQ8NDC0 245 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 BPIFB6Q8NFQ5 453 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 OR5C1Q8NGR4 320 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 OR4A5Q8NH83 315 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 OTOSQ8NHW6 89 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 RAB2BQ8WUD1 216 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 PSMF1Q92530 271 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 MRPS24Q96EL2 167 aaKnown RBP2.12□□□□□ -2.07
PSPC1-208ENST00000635562 TBL1YQ9BQ87 522 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 HDHD3Q9BSH5 251 aaPredicted RBP2.12□□□□□ -2.07
PSPC1-208ENST00000635562 SEC11CQ9BY50 192 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 PLA2G2FQ9BZM2 168 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 ATG5Q9H1Y0 275 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 NAA60Q9H7X0 242 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 HEXA-AS1Q9H8Q6 139 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 SMCO4Q9NRQ5 59 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 KLK13Q9UKR3 277 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 MRPS16Q9Y3D3 137 aaKnown RBP2.12□□□□□ -2.07
PSPC1-208ENST00000635562 PTPRFP10586 1907 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 SCN11AQ9UI33 1791 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 TARBP1Q13395 1621 aaKnown RBP2.12□□□□□ -2.07
PSPC1-208ENST00000635562 ADGRL1O94910 1474 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 TOPAZ1Q8N9V7 1692 aa2.12□□□□□ -2.07
PSPC1-208ENST00000635562 MARF1Q9Y4F3 1742 aaKnown RBP2.11□□□□□ -2.07
PSPC1-208ENST00000635562 IQGAP3Q86VI3 1631 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 IGLV4-3A0A075B6K6 122 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 IGHV1-45A0A0A0MS14 117 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 IGHV3-16A0A0C4DH30 117 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 RPL37AP8A6NKH3 93 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 ZNF705GA8MUZ8 300 aaPredicted RBP2.11□□□□□ -2.07
PSPC1-208ENST00000635562 H3BMG7 143 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 H3BQ15 152 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 TMEM256-PLSCR3K7ERE1 68 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 PLA2G10O15496 165 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 NDUFB3O43676 98 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 MT-ND6P03923 174 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 TCRAP04437 139 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 SRP19P09132 144 aaKnown RBP2.11□□□□□ -2.07
PSPC1-208ENST00000635562 LINC00032P0C843 101 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 ZNF705DP0CH99 300 aaPredicted RBP2.11□□□□□ -2.07
PSPC1-208ENST00000635562 INAFM2P0DMQ5 153 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 HLA-DRB4P13762 266 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 SRP14P37108 136 aaKnown RBP2.11□□□□□ -2.07
PSPC1-208ENST00000635562 CCL20P78556 96 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 Q0VG73 95 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 ORMDL2Q53FV1 153 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 FAM182AQ5T1J6 154 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 CASC10Q5T4H9 136 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 C9orf153Q5TBE3 101 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 AADACL3Q5VUY0 350 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 SLC25A42Q86VD7 318 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 GPHB5Q86YW7 130 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 Q8N377 158 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 RNF182Q8N6D2 247 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 OR10P1Q8NGE3 313 aa2.11□□□□□ -2.07
PSPC1-208ENST00000635562 OR4X2Q8NGF9 303 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms