RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 HIST1H1EP10412 219 aaKnown RBP4.38□□□□□ -1.71
NEK3-211ENST00000629912 GATA3P23771 443 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 SAA4P35542 130 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 RPL35P42766 123 aaKnown RBP4.38□□□□□ -1.71
NEK3-211ENST00000629912 SNRPEP62304 92 aaKnown RBP4.38□□□□□ -1.71
NEK3-211ENST00000629912 UBE2L3P68036 154 aaKnown RBP4.38□□□□□ -1.71
NEK3-211ENST00000629912 SRSF1Q07955 248 aaKnown RBP eCLIP4.38□□□□□ -1.71
NEK3-211ENST00000629912 TIGITQ495A1 244 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 TEX38Q6PEX7 206 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 KCNIP4Q6PIL6 250 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 C19orf35Q6ZS72 473 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 S100A7AQ86SG5 101 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 ZNF329Q86UD4 541 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 ZFP82Q8N141 532 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 ZNF491Q8N8L2 437 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 OR10G8Q8NGN5 311 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 OR1B1Q8NGR6 318 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 SGMS2Q8NHU3 365 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 FAM110DQ8TAY7 271 aaPredicted RBP4.38□□□□□ -1.71
NEK3-211ENST00000629912 VN1R17PQ8TDU5 208 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 SFRP2Q96HF1 295 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 RBM14Q96PK6 669 aaKnown RBP4.38□□□□□ -1.71
NEK3-211ENST00000629912 RASL11BQ9BPW5 248 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 SAV1Q9H4B6 383 aaPredicted RBP4.38□□□□□ -1.71
NEK3-211ENST00000629912 OSTCQ9NRP0 149 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 CDC42EP3Q9UKI2 254 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 EPDR1Q9UM22 224 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 HIGD1AQ9Y241 93 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 KLF12Q9Y4X4 402 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 URGCP-MRPS24S4R325 110 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 AKAP6Q13023 2319 aa4.38□□□□□ -1.71
NEK3-211ENST00000629912 IGHV4-30-2A0A087WSY4 118 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 TRBV9A0A0B4J1U6 114 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 IGHV3-21A0A0B4J1V1 117 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 MDFIC2A0A1B0GVS7 189 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 F8W735 103 aaPredicted RBP4.37□□□□□ -1.71
NEK3-211ENST00000629912 K7EN84 100 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 ISLRO14498 428 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 NDUFB8O95169 186 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 BRI3O95415 125 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 IGLV2-8P01709 118 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 TRGC2P03986 189 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 PYYP10082 97 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 GP9P14770 177 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 COX6B1P14854 86 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 SLC25A16P16260 332 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 HOXA5P20719 270 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 GNG4P50150 75 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 CRIP2P52943 208 aaPredicted RBP4.37□□□□□ -1.71
NEK3-211ENST00000629912 TMEM183BQ1AE95 376 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 LINC00518Q8N0U6 118 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 LYPD1Q8N2G4 141 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 OR5T1Q8NG75 326 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 PIFOQ8TCI5 191 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 SMIM12Q96EX1 92 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 IGF2BP2-AS1Q96M15 143 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 ATP6V0BQ99437 205 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 SHANK2-AS3Q9BTD1 123 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 FAM103A1Q9BTL3 118 aaKnown RBP4.37□□□□□ -1.71
NEK3-211ENST00000629912 KRTAP3-3Q9BYR6 98 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 KRTAP3-2Q9BYR7 98 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 SLC25A39Q9BZJ4 359 aaPredicted RBP4.37□□□□□ -1.71
NEK3-211ENST00000629912 GSX1Q9H4S2 264 aaPredicted RBP4.37□□□□□ -1.71
NEK3-211ENST00000629912 OTORQ9NRC9 128 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 IL36BQ9NZH7 164 aa4.37□□□□□ -1.71
NEK3-211ENST00000629912 SPTAN1Q13813 2472 aaKnown RBP4.37□□□□□ -1.71
NEK3-211ENST00000629912 USP24Q9UPU5 2620 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 TRAV20A0A0B4J274 112 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 TRBV6-1A0A0K0K1D8 114 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 PGPA6NDG6 321 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 PGPEP1LA6NFU8 196 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 B4DSR2 109 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 PPP5D1E7EU14 171 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 H3BRN7 92 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 PEX7O00628 323 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 MRPS12O15235 138 aaKnown RBP4.36□□□□□ -1.71
NEK3-211ENST00000629912 GNG7O60262 68 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 HIST1H2BKO60814 126 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 SCGB2A1O75556 95 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 PRB1P04280 392 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 HIST1H2BJP06899 126 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 MSMBP08118 114 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 CTSGP08311 255 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 HIST1H2BOP23527 126 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 S100A7P31151 101 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 HIST1H2BBP33778 126 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 CNN1P51911 297 aaKnown RBP4.36□□□□□ -1.71
NEK3-211ENST00000629912 FAM3BP58499 235 aaPredicted RBP4.36□□□□□ -1.71
NEK3-211ENST00000629912 HIST1H2BDP58876 126 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 LYZP61626 148 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 HIST1H2BCP62807 126 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 RANP62826 216 aaKnown RBP4.36□□□□□ -1.71
NEK3-211ENST00000629912 NDPQ00604 133 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 HIST2H2BEQ16778 126 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 C19orf54Q5BKX5 351 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 CENPWQ5EE01 88 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 KLF17Q5JT82 389 aaPredicted RBP4.36□□□□□ -1.71
NEK3-211ENST00000629912 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.36□□□□□ -1.71
NEK3-211ENST00000629912 ZNF600Q6ZNG1 722 aa4.36□□□□□ -1.71
NEK3-211ENST00000629912 FAM231DQ6ZW35 169 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms