RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 RTL8CO15255 209 aa13.58□□□□□ -0.24
SMN2-215ENST00000628696 GABARAPO95166 117 aa13.58□□□□□ -0.24
SMN2-215ENST00000628696 DEFB1P60022 68 aa13.58□□□□□ -0.24
SMN2-215ENST00000628696 GDF5OSQ5U4N7 250 aa13.58□□□□□ -0.24
SMN2-215ENST00000628696 GPR107Q5VW38 600 aa13.58□□□□□ -0.24
SMN2-215ENST00000628696 UBE2DNLQ8IWF7 75 aa13.58□□□□□ -0.24
SMN2-215ENST00000628696 FAT2Q9NYQ8 4349 aa13.58□□□□□ -0.24
SMN2-215ENST00000628696 DNAH2Q9P225 4427 aa13.57□□□□□ -0.24
SMN2-215ENST00000628696 DISC1C4P0D8 188 aa13.57□□□□□ -0.24
SMN2-215ENST00000628696 IFNA21P01568 189 aa13.57□□□□□ -0.24
SMN2-215ENST00000628696 NKX2-1P43699 371 aaPredicted RBP13.57□□□□□ -0.24
SMN2-215ENST00000628696 ZNF705AQ6ZN79 300 aaPredicted RBP13.57□□□□□ -0.24
SMN2-215ENST00000628696 RNF125Q96EQ8 232 aa13.57□□□□□ -0.24
SMN2-215ENST00000628696 NEU1Q99519 415 aa13.57□□□□□ -0.24
SMN2-215ENST00000628696 IGLV2-18A0A075B6J9 118 aa13.56□□□□□ -0.24
SMN2-215ENST00000628696 TMEM189A5PLL7 270 aa13.56□□□□□ -0.24
SMN2-215ENST00000628696 CRYM-AS1A6NIL9 109 aa13.56□□□□□ -0.24
SMN2-215ENST00000628696 RGS5O15539 181 aa13.56□□□□□ -0.24
SMN2-215ENST00000628696 SULT1A3P0DMM9 295 aa13.56□□□□□ -0.24
SMN2-215ENST00000628696 SULT1A4P0DMN0 295 aa13.56□□□□□ -0.24
SMN2-215ENST00000628696 MED14OSP0DP75 135 aa13.56□□□□□ -0.24
SMN2-215ENST00000628696 OR4B1Q8NGF8 309 aa13.56□□□□□ -0.24
SMN2-215ENST00000628696 PFDN2Q9UHV9 154 aa13.56□□□□□ -0.24
SMN2-215ENST00000628696 GPR132Q9UNW8 380 aa13.56□□□□□ -0.24
SMN2-215ENST00000628696 SMIM9A6NGZ8 99 aa13.55□□□□□ -0.24
SMN2-215ENST00000628696 ZNF705FA8MVS1 300 aaPredicted RBP13.55□□□□□ -0.24
SMN2-215ENST00000628696 ZNF705DP0CH99 300 aaPredicted RBP13.55□□□□□ -0.24
SMN2-215ENST00000628696 ZNF705BP0CI00 300 aaPredicted RBP13.55□□□□□ -0.24
SMN2-215ENST00000628696 ID1P41134 155 aa13.55□□□□□ -0.24
SMN2-215ENST00000628696 SSBP1Q04837 148 aaKnown RBP13.55□□□□□ -0.24
SMN2-215ENST00000628696 KLF9Q13886 244 aaPredicted RBP13.55□□□□□ -0.24
SMN2-215ENST00000628696 SURF2Q15527 256 aaPredicted RBP13.55□□□□□ -0.24
SMN2-215ENST00000628696 CTF1Q16619 201 aa13.55□□□□□ -0.24
SMN2-215ENST00000628696 NMSQ5H8A3 153 aa13.55□□□□□ -0.24
SMN2-215ENST00000628696 WDR12Q9GZL7 423 aaKnown RBP13.55□□□□□ -0.24
SMN2-215ENST00000628696 MIXL1Q9H2W2 232 aa13.55□□□□□ -0.24
SMN2-215ENST00000628696 PRR13Q9NZ81 148 aa13.55□□□□□ -0.24
SMN2-215ENST00000628696 PLA2G2EQ9NZK7 142 aa13.55□□□□□ -0.24
SMN2-215ENST00000628696 RFNGQ9Y644 331 aa13.55□□□□□ -0.24
SMN2-215ENST00000628696 TMEM56-RWDD3S4R434 201 aa13.55□□□□□ -0.24
SMN2-215ENST00000628696 PKHD1P08F94 4074 aa13.54□□□□□ -0.24
SMN2-215ENST00000628696 ZFP92A6NM28 416 aa13.54□□□□□ -0.24
SMN2-215ENST00000628696 HTN3P15516 51 aa13.54□□□□□ -0.24
SMN2-215ENST00000628696 NUP62P37198 522 aaPredicted RBP13.54□□□□□ -0.24
SMN2-215ENST00000628696 LGALS9BQ3B8N2 356 aa13.54□□□□□ -0.24
SMN2-215ENST00000628696 GSG1LQ6UXU4 331 aa13.54□□□□□ -0.24
SMN2-215ENST00000628696 LGI3Q8N145 548 aa13.54□□□□□ -0.24
SMN2-215ENST00000628696 COQ8AQ8NI60 647 aa13.54□□□□□ -0.24
SMN2-215ENST00000628696 SAV1Q9H4B6 383 aaPredicted RBP13.54□□□□□ -0.24
SMN2-215ENST00000628696 CACFD1Q9UGQ2 172 aa13.54□□□□□ -0.24
SMN2-215ENST00000628696 KCNIP3Q9Y2W7 256 aa13.54□□□□□ -0.24
SMN2-215ENST00000628696 U3KQ87 197 aa13.54□□□□□ -0.24
SMN2-215ENST00000628696 AKAIN1P0CW23 69 aa13.53□□□□□ -0.24
SMN2-215ENST00000628696 MRPS10P82664 201 aaKnown RBP13.53□□□□□ -0.24
SMN2-215ENST00000628696 ZNF90Q03938 601 aa13.53□□□□□ -0.24
SMN2-215ENST00000628696 FAM222AQ5U5X8 452 aa13.53□□□□□ -0.24
SMN2-215ENST00000628696 FOXI2Q6ZQN5 318 aa13.53□□□□□ -0.24
SMN2-215ENST00000628696 OR4C16Q8NGL9 310 aa13.53□□□□□ -0.24
SMN2-215ENST00000628696 DTD1Q8TEA8 209 aa13.53□□□□□ -0.24
SMN2-215ENST00000628696 PPP1R14BQ96C90 147 aa13.53□□□□□ -0.24
SMN2-215ENST00000628696 NIPSNAP3BQ9BS92 247 aa13.53□□□□□ -0.24
SMN2-215ENST00000628696 RBKSQ9H477 322 aa13.53□□□□□ -0.24
SMN2-215ENST00000628696 DKK2Q9UBU2 259 aa13.53□□□□□ -0.24
SMN2-215ENST00000628696 CTDSP2O14595 271 aa13.52□□□□□ -0.25
SMN2-215ENST00000628696 LYZP61626 148 aa13.52□□□□□ -0.25
SMN2-215ENST00000628696 OR8G2PQ6IF36 304 aa13.52□□□□□ -0.25
SMN2-215ENST00000628696 OR51S1Q8NGJ8 323 aa13.52□□□□□ -0.25
SMN2-215ENST00000628696 SLC35E1Q96K37 410 aa13.52□□□□□ -0.25
SMN2-215ENST00000628696 FAM210BQ96KR6 192 aa13.52□□□□□ -0.25
SMN2-215ENST00000628696 PRRT1Q99946 306 aa13.52□□□□□ -0.25
SMN2-215ENST00000628696 C7orf50Q9BRJ6 194 aaKnown RBP13.52□□□□□ -0.25
SMN2-215ENST00000628696 SLC35B3Q9H1N7 401 aa13.52□□□□□ -0.25
SMN2-215ENST00000628696 GOLT1BQ9Y3E0 138 aa13.52□□□□□ -0.25
SMN2-215ENST00000628696 PSMB3P49720 205 aa13.51□□□□□ -0.25
SMN2-215ENST00000628696 CCR6P51684 374 aa13.51□□□□□ -0.25
SMN2-215ENST00000628696 OR2F1Q13607 317 aa13.51□□□□□ -0.25
SMN2-215ENST00000628696 GAMTQ14353 236 aa13.51□□□□□ -0.25
SMN2-215ENST00000628696 SMCO1Q147U7 214 aa13.51□□□□□ -0.25
SMN2-215ENST00000628696 CLVS1Q8IUQ0 354 aaPredicted RBP13.51□□□□□ -0.25
SMN2-215ENST00000628696 ZNF709Q8N972 641 aa13.51□□□□□ -0.25
SMN2-215ENST00000628696 SMIM4Q8WVI0 70 aa13.51□□□□□ -0.25
SMN2-215ENST00000628696 IL22RA2Q969J5 263 aa13.51□□□□□ -0.25
SMN2-215ENST00000628696 HSPB7Q9UBY9 170 aa13.51□□□□□ -0.25
SMN2-215ENST00000628696 TEX48A0A1B0GUV7 120 aa13.5□□□□□ -0.25
SMN2-215ENST00000628696 F6UB75 175 aa13.5□□□□□ -0.25
SMN2-215ENST00000628696 SUPT4H1P63272 117 aaKnown RBP13.5□□□□□ -0.25
SMN2-215ENST00000628696 PSG9Q00887 426 aa13.5□□□□□ -0.25
SMN2-215ENST00000628696 IL18Q14116 193 aa13.5□□□□□ -0.25
SMN2-215ENST00000628696 EBLN2Q6P2I7 272 aa13.5□□□□□ -0.25
SMN2-215ENST00000628696 LYZL2Q7Z4W2 148 aa13.5□□□□□ -0.25
SMN2-215ENST00000628696 IGKV1D-37A0A075B6S9 117 aa13.49□□□□□ -0.25
SMN2-215ENST00000628696 LOC102723971A0A1B0GUV8 181 aa13.49□□□□□ -0.25
SMN2-215ENST00000628696 SNRPGP15A8MWD9 76 aa13.49□□□□□ -0.25
SMN2-215ENST00000628696 HBE1P02100 147 aa13.49□□□□□ -0.25
SMN2-215ENST00000628696 FABP1P07148 127 aa13.49□□□□□ -0.25
SMN2-215ENST00000628696 AKR1C4P17516 323 aa13.49□□□□□ -0.25
SMN2-215ENST00000628696 GPX4P36969 197 aaPredicted RBP13.49□□□□□ -0.25
SMN2-215ENST00000628696 FAM78BQ5VT40 261 aa13.49□□□□□ -0.25
SMN2-215ENST00000628696 OR8I2Q8N0Y5 310 aa13.49□□□□□ -0.25
SMN2-215ENST00000628696 OR1S1Q8NH92 325 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms