RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 NPVFQ9HCQ7 196 aa14.04□□□□□ -0.16
CIRBP-245ENST00000621399 IGHV3OR16-13A0A075B7E8 117 aa14.03□□□□□ -0.16
CIRBP-245ENST00000621399 IGHV3-74A0A0B4J1X5 117 aa14.03□□□□□ -0.16
CIRBP-245ENST00000621399 WI2-2373I1.2A0A1W2PRP0 233 aa14.03□□□□□ -0.16
CIRBP-245ENST00000621399 IZUMO1RA6ND01 250 aa14.03□□□□□ -0.16
CIRBP-245ENST00000621399 FNDC10F2Z333 226 aa14.03□□□□□ -0.16
CIRBP-245ENST00000621399 GP9P14770 177 aa14.03□□□□□ -0.16
CIRBP-245ENST00000621399 OR2F1Q13607 317 aa14.03□□□□□ -0.16
CIRBP-245ENST00000621399 OR51G1Q8NGK1 321 aa14.03□□□□□ -0.16
CIRBP-245ENST00000621399 RNF126Q9BV68 326 aa14.03□□□□□ -0.16
CIRBP-245ENST00000621399 SLC25A31Q9H0C2 315 aa14.03□□□□□ -0.16
CIRBP-245ENST00000621399 CHEK1O14757 476 aa14.02□□□□□ -0.17
CIRBP-245ENST00000621399 S100A11P31949 105 aa14.02□□□□□ -0.17
CIRBP-245ENST00000621399 BMI1P35226 326 aa14.02□□□□□ -0.17
CIRBP-245ENST00000621399 HBG1P69891 147 aa14.02□□□□□ -0.17
CIRBP-245ENST00000621399 HBG2P69892 147 aa14.02□□□□□ -0.17
CIRBP-245ENST00000621399 RBPMS2Q6ZRY4 209 aaKnown RBP14.02□□□□□ -0.17
CIRBP-245ENST00000621399 LILRB2Q8N423 598 aa14.02□□□□□ -0.17
CIRBP-245ENST00000621399 APOHP02749 345 aaPredicted RBP14.01□□□□□ -0.17
CIRBP-245ENST00000621399 USF2Q15853 346 aaPredicted RBP14.01□□□□□ -0.17
CIRBP-245ENST00000621399 GUCA2BQ16661 112 aa14.01□□□□□ -0.17
CIRBP-245ENST00000621399 LAMTOR1Q6IAA8 161 aa14.01□□□□□ -0.17
CIRBP-245ENST00000621399 TMEM61Q8N0U2 210 aa14.01□□□□□ -0.17
CIRBP-245ENST00000621399 RNF125Q96EQ8 232 aa14.01□□□□□ -0.17
CIRBP-245ENST00000621399 NARS2Q96I59 477 aaKnown RBP14.01□□□□□ -0.17
CIRBP-245ENST00000621399 PBDC1Q9BVG4 233 aa14.01□□□□□ -0.17
CIRBP-245ENST00000621399 TRAV25A0A0B4J276 109 aa14□□□□□ -0.17
CIRBP-245ENST00000621399 IGHV3-66A0A0C4DH42 116 aa14□□□□□ -0.17
CIRBP-245ENST00000621399 A0A1W2PS18 150 aa14□□□□□ -0.17
CIRBP-245ENST00000621399 ZNF785A8K8V0 405 aa14□□□□□ -0.17
CIRBP-245ENST00000621399 K7EIL1 84 aa14□□□□□ -0.17
CIRBP-245ENST00000621399 GIPP09681 153 aaPredicted RBP14□□□□□ -0.17
CIRBP-245ENST00000621399 CRYBB3P26998 211 aa14□□□□□ -0.17
CIRBP-245ENST00000621399 EWSR1Q01844 656 aaKnown RBP eCLIP14□□□□□ -0.17
CIRBP-245ENST00000621399 TEPPQ6URK8 271 aa14□□□□□ -0.17
CIRBP-245ENST00000621399 THAP6Q8TBB0 222 aa14□□□□□ -0.17
CIRBP-245ENST00000621399 ASB13Q8WXK3 278 aa14□□□□□ -0.17
CIRBP-245ENST00000621399 ST8SIA2Q92186 375 aa14□□□□□ -0.17
CIRBP-245ENST00000621399 RNF2Q99496 336 aa14□□□□□ -0.17
CIRBP-245ENST00000621399 TMEM231Q9H6L2 316 aa14□□□□□ -0.17
CIRBP-245ENST00000621399 MBD2Q9UBB5 411 aa14□□□□□ -0.17
CIRBP-245ENST00000621399 RABAC1Q9UI14 185 aa14□□□□□ -0.17
CIRBP-245ENST00000621399 TGP01266 2768 aa13.99□□□□□ -0.17
CIRBP-245ENST00000621399 CFDP00746 253 aaPredicted RBP13.99□□□□□ -0.17
CIRBP-245ENST00000621399 HNRNPCP07910 306 aaKnown RBP eCLIP13.99□□□□□ -0.17
CIRBP-245ENST00000621399 LYZP61626 148 aa13.99□□□□□ -0.17
CIRBP-245ENST00000621399 NHLH2Q02577 135 aa13.99□□□□□ -0.17
CIRBP-245ENST00000621399 ATP6V1FQ16864 119 aa13.99□□□□□ -0.17
CIRBP-245ENST00000621399 CYP2G1PQ6ZSU1 146 aa13.99□□□□□ -0.17
CIRBP-245ENST00000621399 BPIFCQ8NFQ6 507 aa13.99□□□□□ -0.17
CIRBP-245ENST00000621399 MRAPQ8TCY5 172 aa13.99□□□□□ -0.17
CIRBP-245ENST00000621399 VSIRQ9H7M9 311 aa13.99□□□□□ -0.17
CIRBP-245ENST00000621399 UQCC1Q9NVA1 299 aa13.99□□□□□ -0.17
CIRBP-245ENST00000621399 GATA2P23769 480 aaPredicted RBP13.98□□□□□ -0.17
CIRBP-245ENST00000621399 RAP2BP61225 183 aa13.98□□□□□ -0.17
CIRBP-245ENST00000621399 BAXQ07812 192 aa13.98□□□□□ -0.17
CIRBP-245ENST00000621399 FGL1Q08830 312 aa13.98□□□□□ -0.17
CIRBP-245ENST00000621399 DEFB121Q5J5C9 76 aa13.98□□□□□ -0.17
CIRBP-245ENST00000621399 TMEM182Q6ZP80 229 aaPredicted RBP13.98□□□□□ -0.17
CIRBP-245ENST00000621399 GRAMD2BQ96HH9 432 aa13.98□□□□□ -0.17
CIRBP-245ENST00000621399 TMEM147Q9BVK8 224 aa13.98□□□□□ -0.17
CIRBP-245ENST00000621399 LYL1P12980 280 aa13.97□□□□□ -0.17
CIRBP-245ENST00000621399 RPL12P30050 165 aaKnown RBP13.97□□□□□ -0.17
CIRBP-245ENST00000621399 EIF2B2P49770 351 aaKnown RBP13.97□□□□□ -0.17
CIRBP-245ENST00000621399 SELENOTP62341 195 aa13.97□□□□□ -0.17
CIRBP-245ENST00000621399 VWC2Q2TAL6 325 aa13.97□□□□□ -0.17
CIRBP-245ENST00000621399 GTSCR1Q86UQ5 136 aa13.97□□□□□ -0.17
CIRBP-245ENST00000621399 OR5C1Q8NGR4 320 aa13.97□□□□□ -0.17
CIRBP-245ENST00000621399 PFDN2Q9UHV9 154 aa13.97□□□□□ -0.17
CIRBP-245ENST00000621399 LSM4Q9Y4Z0 139 aaKnown RBP13.97□□□□□ -0.17
CIRBP-245ENST00000621399 U3KQE9 123 aa13.97□□□□□ -0.17
CIRBP-245ENST00000621399 UBE2L5PA0A1B0GUS4 154 aa13.96□□□□□ -0.17
CIRBP-245ENST00000621399 TSPAN4O14817 238 aa13.96□□□□□ -0.17
CIRBP-245ENST00000621399 DFFBO76075 338 aa13.96□□□□□ -0.17
CIRBP-245ENST00000621399 CD5P06127 495 aa13.96□□□□□ -0.17
CIRBP-245ENST00000621399 RPL11P62913 178 aaKnown RBP13.96□□□□□ -0.17
CIRBP-245ENST00000621399 RAB31Q13636 194 aa13.96□□□□□ -0.17
CIRBP-245ENST00000621399 TCF24Q7RTU0 167 aa13.96□□□□□ -0.17
CIRBP-245ENST00000621399 WDR83OSQ9Y284 106 aa13.96□□□□□ -0.17
CIRBP-245ENST00000621399 IGKV3-7A0A075B6H7 116 aa13.95□□□□□ -0.18
CIRBP-245ENST00000621399 AGPAT2O15120 278 aa13.95□□□□□ -0.18
CIRBP-245ENST00000621399 ORM2P19652 201 aa13.95□□□□□ -0.18
CIRBP-245ENST00000621399 CLINT1Q14677 625 aa13.95□□□□□ -0.18
CIRBP-245ENST00000621399 FAM90A2PQ658T7 463 aa13.95□□□□□ -0.18
CIRBP-245ENST00000621399 ZNF546Q86UE3 836 aa13.95□□□□□ -0.18
CIRBP-245ENST00000621399 OR1B1Q8NGR6 318 aa13.95□□□□□ -0.18
CIRBP-245ENST00000621399 PPP1R14BQ96C90 147 aa13.95□□□□□ -0.18
CIRBP-245ENST00000621399 MGST2Q99735 147 aa13.95□□□□□ -0.18
CIRBP-245ENST00000621399 SPAG8Q99932 426 aaPredicted RBP13.95□□□□□ -0.18
CIRBP-245ENST00000621399 SORL1Q92673 2214 aa13.94□□□□□ -0.18
CIRBP-245ENST00000621399 LINC00869P0C866 280 aa13.94□□□□□ -0.18
CIRBP-245ENST00000621399 NUP62P37198 522 aaPredicted RBP13.94□□□□□ -0.18
CIRBP-245ENST00000621399 CAMLGP49069 296 aa13.94□□□□□ -0.18
CIRBP-245ENST00000621399 CD81P60033 236 aa13.94□□□□□ -0.18
CIRBP-245ENST00000621399 Q5BKY6 102 aa13.94□□□□□ -0.18
CIRBP-245ENST00000621399 Q8N1Y9 231 aa13.94□□□□□ -0.18
CIRBP-245ENST00000621399 OR2T35Q8NGX2 323 aa13.94□□□□□ -0.18
CIRBP-245ENST00000621399 CHAC2Q8WUX2 184 aa13.94□□□□□ -0.18
CIRBP-245ENST00000621399 SLC45A2Q9UMX9 530 aa13.94□□□□□ -0.18
CIRBP-245ENST00000621399 HSPB11Q9Y547 144 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms