RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 PKIAP61925 76 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 TMEM267Q0VDI3 215 aaPredicted RBP4.12□□□□□ -1.75
SHMT1-211ENST00000618902 FOXE3Q13461 319 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 PSG5Q15238 335 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 AKIRIN2Q53H80 203 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 TMEM177Q53S58 311 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 OR2B11Q5JQS5 317 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 TCTEX1D4Q5JR98 221 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 KPRPQ5T749 579 aaPredicted RBP4.12□□□□□ -1.75
SHMT1-211ENST00000618902 FAM90A2PQ658T7 463 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 TMEM183AQ8IXX5 376 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 ZFP82Q8N141 532 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 NPBQ8NG41 125 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 OR51G1Q8NGK1 321 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 OR10G9Q8NGN4 311 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 OR10G7Q8NGN6 311 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 DTD1Q8TEA8 209 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 ISOC2Q96AB3 205 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 RPUSD4Q96CM3 377 aaKnown RBP4.12□□□□□ -1.75
SHMT1-211ENST00000618902 PACRGQ96M98 296 aaPredicted RBP4.12□□□□□ -1.75
SHMT1-211ENST00000618902 NOL4LQ96MY1 436 aaPredicted RBP4.12□□□□□ -1.75
SHMT1-211ENST00000618902 RNF2Q99496 336 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 RASL11BQ9BPW5 248 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 MAP1LC3BQ9GZQ8 125 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 FBXL15Q9H469 300 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 RBKSQ9H477 322 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 NPVFQ9HCQ7 196 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 SLC35D1Q9NTN3 355 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 LINC00527Q9UJ94 153 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 WASHC3Q9Y3C0 194 aa4.12□□□□□ -1.75
SHMT1-211ENST00000618902 PSMB11A5LHX3 300 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 ZFP92A6NM28 416 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 NCBP2LA6PVI3 153 aaKnown RBP4.11□□□□□ -1.75
SHMT1-211ENST00000618902 PMS2P5A8MQ11 134 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 CEBPZOSA8MTT3 80 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 H3BUA1 57 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 H7BYZ3 331 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 RRHO14718 337 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 NBR2O15453 112 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 HIST1H2BKO60814 126 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 FCGR3BO75015 233 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 CXorf1O96002 111 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 HRASP01112 189 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 IGKV1-39P01597 117 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 IGHG4P01861 327 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 HLA-DRB1P01911 266 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 IGKV1D-39P04432 117 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 HIST1H2BJP06899 126 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 HIST1H2BOP23527 126 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 HIST1H2BBP33778 126 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 INSL3P51460 131 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 CRIP2P52943 208 aaPredicted RBP4.11□□□□□ -1.75
SHMT1-211ENST00000618902 HIST1H2BDP58876 126 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 SSTP61278 116 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 HIST1H2BCP62807 126 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 RUNX1Q01196 453 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 JOSD1Q15040 202 aaPredicted RBP4.11□□□□□ -1.75
SHMT1-211ENST00000618902 MMDQ15546 238 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 HIST2H2BEQ16778 126 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 C5orf64Q2M2E5 130 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 C19orf54Q5BKX5 351 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 C9orf152Q5JTZ5 239 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.11□□□□□ -1.75
SHMT1-211ENST00000618902 ZNF562Q6V9R5 426 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 Q6ZRM9 215 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 MRPL52Q86TS9 123 aaKnown RBP4.11□□□□□ -1.75
SHMT1-211ENST00000618902 PDPNQ86YL7 162 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 VKORC1L1Q8N0U8 176 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 RPP25LQ8N5L8 163 aaKnown RBP4.11□□□□□ -1.75
SHMT1-211ENST00000618902 C11orf44Q8N8P7 122 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 OR5AU1Q8NGC0 362 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 OR4A16Q8NH70 328 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 Q8WTZ3 238 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 HIST1H2BHQ93079 126 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 TMEM18Q96B42 140 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 HIST1H2BNQ99877 126 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 HIST1H2BMQ99879 126 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 SMIM7Q9BQ49 75 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 C20orf24Q9BUV8 137 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 WDR83OSQ9Y284 106 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 ZNF257Q9Y2Q1 563 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 SORL1Q92673 2214 aa4.11□□□□□ -1.75
SHMT1-211ENST00000618902 DNAH9Q9NYC9 4486 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 TRBV9A0A0B4J1U6 114 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 IGHV7-81A0A0B4J1V7 117 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 TRAV3A0A0B4J244 114 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 A0A0G2JRQ6 117 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 MARCH11A6NNE9 402 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 ADARB2-AS1A8MUL3 147 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 INS-IGF2F8WCM5 200 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 G3V318 75 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 WIPF1O43516 503 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 SLC25A17O43808 307 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 GGCTO75223 188 aaKnown RBP4.1□□□□□ -1.75
SHMT1-211ENST00000618902 RBMXL2O75526 392 aaKnown RBP4.1□□□□□ -1.75
SHMT1-211ENST00000618902 S1PR2O95136 353 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 KRASP01116 189 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 APOA2P02652 100 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 TRGC2P03986 189 aa4.1□□□□□ -1.75
SHMT1-211ENST00000618902 IL6RP08887 468 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms