RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 BMI1P35226 326 aa10.68□□□□□ -0.7
PPP4R3B-206ENST00000616407 RELQ04864 619 aaPredicted RBP10.68□□□□□ -0.7
PPP4R3B-206ENST00000616407 NEU1Q99519 415 aa10.68□□□□□ -0.7
PPP4R3B-206ENST00000616407 C7orf69Q9H7B7 122 aa10.68□□□□□ -0.7
PPP4R3B-206ENST00000616407 OSTCQ9NRP0 149 aa10.68□□□□□ -0.7
PPP4R3B-206ENST00000616407 NOTCH3Q9UM47 2321 aa10.68□□□□□ -0.7
PPP4R3B-206ENST00000616407 NPPCP23582 126 aa10.68□□□□□ -0.7
PPP4R3B-206ENST00000616407 DLX6P56179 175 aa10.68□□□□□ -0.7
PPP4R3B-206ENST00000616407 C8orf46Q8TAG6 207 aa10.68□□□□□ -0.7
PPP4R3B-206ENST00000616407 EEF1AKMT3Q96AZ1 226 aa10.68□□□□□ -0.7
PPP4R3B-206ENST00000616407 F11RQ9Y624 299 aaKnown RBP10.68□□□□□ -0.7
PPP4R3B-206ENST00000616407 ARFGEF3Q5TH69 2177 aa10.67□□□□□ -0.7
PPP4R3B-206ENST00000616407 LOC389332A0A1B0GUA5 103 aa10.67□□□□□ -0.7
PPP4R3B-206ENST00000616407 TPSG1Q9NRR2 321 aa10.67□□□□□ -0.7
PPP4R3B-206ENST00000616407 FNDC10F2Z333 226 aa10.67□□□□□ -0.7
PPP4R3B-206ENST00000616407 SMIM17P0DL12 118 aa10.67□□□□□ -0.7
PPP4R3B-206ENST00000616407 WT1-ASQ06250 92 aa10.67□□□□□ -0.7
PPP4R3B-206ENST00000616407 C22orf34Q6ZV56 151 aa10.67□□□□□ -0.7
PPP4R3B-206ENST00000616407 ATG101Q9BSB4 218 aa10.67□□□□□ -0.7
PPP4R3B-206ENST00000616407 DMRT1Q9Y5R6 373 aa10.67□□□□□ -0.7
PPP4R3B-206ENST00000616407 HIGD1CA8MV81 97 aa10.67□□□□□ -0.7
PPP4R3B-206ENST00000616407 TRGV3P03979 118 aa10.67□□□□□ -0.7
PPP4R3B-206ENST00000616407 ADMP35318 185 aa10.67□□□□□ -0.7
PPP4R3B-206ENST00000616407 CLEC19AQ6UXS0 136 aa10.67□□□□□ -0.7
PPP4R3B-206ENST00000616407 SOD3P08294 240 aa10.66□□□□□ -0.7
PPP4R3B-206ENST00000616407 TWIST1Q15672 202 aa10.66□□□□□ -0.7
PPP4R3B-206ENST00000616407 RNF5Q99942 180 aa10.66□□□□□ -0.7
PPP4R3B-206ENST00000616407 CX3CL1P78423 397 aa10.66□□□□□ -0.7
PPP4R3B-206ENST00000616407 PVRIGQ6DKI7 326 aa10.66□□□□□ -0.7
PPP4R3B-206ENST00000616407 Q6ZN92 141 aa10.66□□□□□ -0.7
PPP4R3B-206ENST00000616407 ZNF600Q6ZNG1 722 aa10.66□□□□□ -0.7
PPP4R3B-206ENST00000616407 SCRT1Q9BWW7 348 aa10.66□□□□□ -0.7
PPP4R3B-206ENST00000616407 HBBP68871 147 aa10.66□□□□□ -0.7
PPP4R3B-206ENST00000616407 C5orf64Q2M2E5 130 aa10.66□□□□□ -0.7
PPP4R3B-206ENST00000616407 Q8NA96 180 aa10.66□□□□□ -0.7
PPP4R3B-206ENST00000616407 TRGV9Q99603 122 aa10.66□□□□□ -0.7
PPP4R3B-206ENST00000616407 C11orf1Q9H5F2 150 aa10.66□□□□□ -0.7
PPP4R3B-206ENST00000616407 TRAV9-1A0A075B6T8 112 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 PRTN3P24158 256 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 FOXL1Q12952 345 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 POU2AF1Q16633 256 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 TCF24Q7RTU0 167 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 HIST3H2BBQ8N257 126 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 LINC00311Q8N616 119 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 FMC1Q96HJ9 113 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 LINC00479Q96M42 142 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 C9JCJ5 164 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 SIAH2O43255 324 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 DDTP30046 118 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 TDGF1P3P51864 188 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 DPF1Q92782 380 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 TMEM191AQ9H0A3 160 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 RPP21Q9H633 154 aaKnown RBP10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 OTORQ9NRC9 128 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 KAAG1Q9UBP8 84 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 LINC00527Q9UJ94 153 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 A0A1B0GWJ7 208 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 M0R143 59 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 TFPI2P48307 235 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 ZNF738Q8NE65 137 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 HIST1H2BLQ99880 126 aa10.65□□□□□ -0.7
PPP4R3B-206ENST00000616407 IZUMO1RA6ND01 250 aa10.65□□□□□ -0.71
PPP4R3B-206ENST00000616407 PMS2P5A8MQ11 134 aa10.65□□□□□ -0.71
PPP4R3B-206ENST00000616407 M0R1W7 72 aa10.65□□□□□ -0.71
PPP4R3B-206ENST00000616407 C19orf35Q6ZS72 473 aa10.65□□□□□ -0.71
PPP4R3B-206ENST00000616407 MAP1LC3CQ9BXW4 147 aa10.65□□□□□ -0.71
PPP4R3B-206ENST00000616407 BPESC1Q9GZL8 116 aa10.65□□□□□ -0.71
PPP4R3B-206ENST00000616407 SERF1AO75920 110 aa10.64□□□□□ -0.71
PPP4R3B-206ENST00000616407 RHOGP84095 191 aa10.64□□□□□ -0.71
PPP4R3B-206ENST00000616407 BEND2Q8NDZ0 799 aa10.64□□□□□ -0.71
PPP4R3B-206ENST00000616407 ANKRD11Q6UB99 2663 aaPredicted RBP10.64□□□□□ -0.71
PPP4R3B-206ENST00000616407 MUC21A0A0G2JKD1 596 aa10.64□□□□□ -0.71
PPP4R3B-206ENST00000616407 MUC21A0A140T8X8 626 aa10.64□□□□□ -0.71
PPP4R3B-206ENST00000616407 F5H697 171 aa10.64□□□□□ -0.71
PPP4R3B-206ENST00000616407 RAB9AP51151 201 aa10.64□□□□□ -0.71
PPP4R3B-206ENST00000616407 MUC21Q5SSG8 566 aa10.64□□□□□ -0.71
PPP4R3B-206ENST00000616407 SPANXN1Q5VSR9 72 aa10.64□□□□□ -0.71
PPP4R3B-206ENST00000616407 CENPVQ7Z7K6 275 aaPredicted RBP10.64□□□□□ -0.71
PPP4R3B-206ENST00000616407 EXOC3-AS1Q8N2X6 119 aa10.64□□□□□ -0.71
PPP4R3B-206ENST00000616407 ARHGAP21Q5T5U3 1957 aa10.64□□□□□ -0.71
PPP4R3B-206ENST00000616407 PROP1O75360 226 aa10.64□□□□□ -0.71
PPP4R3B-206ENST00000616407 PFN1P07737 140 aaKnown RBP10.64□□□□□ -0.71
PPP4R3B-206ENST00000616407 DAZAP2Q15038 168 aaPredicted RBP10.64□□□□□ -0.71
PPP4R3B-206ENST00000616407 SSBP4Q9BWG4 385 aaPredicted RBP10.64□□□□□ -0.71
PPP4R3B-206ENST00000616407 SLC25A39Q9BZJ4 359 aaPredicted RBP10.64□□□□□ -0.71
PPP4R3B-206ENST00000616407 CDC42EP3Q9UKI2 254 aa10.64□□□□□ -0.71
PPP4R3B-206ENST00000616407 SAPCD1Q5SSQ6 148 aa10.63□□□□□ -0.71
PPP4R3B-206ENST00000616407 LINC00587B1AMM8 73 aa10.63□□□□□ -0.71
PPP4R3B-206ENST00000616407 OR8A1Q8NGG7 326 aa10.63□□□□□ -0.71
PPP4R3B-206ENST00000616407 TRAV40A0A0B4J280 105 aa10.63□□□□□ -0.71
PPP4R3B-206ENST00000616407 GGCTO75223 188 aaKnown RBP10.63□□□□□ -0.71
PPP4R3B-206ENST00000616407 G0S2P27469 103 aa10.63□□□□□ -0.71
PPP4R3B-206ENST00000616407 COL5A1P20908 1838 aaPredicted RBP10.63□□□□□ -0.71
PPP4R3B-206ENST00000616407 A0A1W2PS18 150 aa10.63□□□□□ -0.71
PPP4R3B-206ENST00000616407 IGHV3-11P01762 117 aa10.63□□□□□ -0.71
PPP4R3B-206ENST00000616407 PRSS1P07477 247 aa10.63□□□□□ -0.71
PPP4R3B-206ENST00000616407 CKS2P33552 79 aa10.63□□□□□ -0.71
PPP4R3B-206ENST00000616407 FAM209BQ5JX69 171 aa10.63□□□□□ -0.71
PPP4R3B-206ENST00000616407 TMEM219Q86XT9 240 aa10.63□□□□□ -0.71
PPP4R3B-206ENST00000616407 FAM19A2Q8N3H0 131 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms