RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 FOXC2Q99958 501 aa12.01□□□□□ -0.49
VPS36-207ENST00000611132 NAA38Q9BRA0 125 aaKnown RBP12.01□□□□□ -0.49
VPS36-207ENST00000611132 RPUSD1Q9UJJ7 312 aaKnown RBP12.01□□□□□ -0.49
VPS36-207ENST00000611132 POLEQ07864 2286 aa12.01□□□□□ -0.49
VPS36-207ENST00000611132 ATP5LO75964 103 aa12.01□□□□□ -0.49
VPS36-207ENST00000611132 IGLL1P15814 213 aa12.01□□□□□ -0.49
VPS36-207ENST00000611132 LMO1P25800 156 aa12.01□□□□□ -0.49
VPS36-207ENST00000611132 THADAQ6YHU6 1953 aa12.01□□□□□ -0.49
VPS36-207ENST00000611132 NUP210Q8TEM1 1887 aaPredicted RBP12.01□□□□□ -0.49
VPS36-207ENST00000611132 TDRG1Q3Y452 100 aa12.01□□□□□ -0.49
VPS36-207ENST00000611132 C9orf106Q8NAJ2 232 aa12.01□□□□□ -0.49
VPS36-207ENST00000611132 SELENOKQ9Y6D0 94 aa12.01□□□□□ -0.49
VPS36-207ENST00000611132 A0A1B0GWB2 263 aa12.01□□□□□ -0.49
VPS36-207ENST00000611132 C10orf55Q5SWW7 151 aa12.01□□□□□ -0.49
VPS36-207ENST00000611132 IFI27L1Q96BM0 104 aa12.01□□□□□ -0.49
VPS36-207ENST00000611132 YPEL4Q96NS1 127 aa12.01□□□□□ -0.49
VPS36-207ENST00000611132 FBXL15Q9H469 300 aa12.01□□□□□ -0.49
VPS36-207ENST00000611132 SLAQ13239 276 aa12□□□□□ -0.49
VPS36-207ENST00000611132 CCDC144NLQ6NUI1 221 aa12□□□□□ -0.49
VPS36-207ENST00000611132 ZNF788Q6ZQV5 615 aa12□□□□□ -0.49
VPS36-207ENST00000611132 MTURNQ8N3F0 131 aa12□□□□□ -0.49
VPS36-207ENST00000611132 NHP2Q9NX24 153 aaKnown RBP12□□□□□ -0.49
VPS36-207ENST00000611132 PSG8Q9UQ74 426 aa12□□□□□ -0.49
VPS36-207ENST00000611132 A0A0G2JLM5 398 aa12□□□□□ -0.49
VPS36-207ENST00000611132 NPPCP23582 126 aa12□□□□□ -0.49
VPS36-207ENST00000611132 MLANAQ16655 118 aa12□□□□□ -0.49
VPS36-207ENST00000611132 FER1L6-AS1Q8NA97 138 aa12□□□□□ -0.49
VPS36-207ENST00000611132 RNF138Q8WVD3 245 aa12□□□□□ -0.49
VPS36-207ENST00000611132 SPOCK3Q9BQ16 436 aa12□□□□□ -0.49
VPS36-207ENST00000611132 SPRR3Q9UBC9 169 aa12□□□□□ -0.49
VPS36-207ENST00000611132 RABAC1Q9UI14 185 aa12□□□□□ -0.49
VPS36-207ENST00000611132 PKDREJQ9NTG1 2253 aa12□□□□□ -0.49
VPS36-207ENST00000611132 TCRAP04437 139 aa12□□□□□ -0.49
VPS36-207ENST00000611132 ZNF138P52744 262 aa12□□□□□ -0.49
VPS36-207ENST00000611132 ERVK11-1P61568 191 aa12□□□□□ -0.49
VPS36-207ENST00000611132 GUSBP1Q15486 140 aa12□□□□□ -0.49
VPS36-207ENST00000611132 RCHY1Q96PM5 261 aa12□□□□□ -0.49
VPS36-207ENST00000611132 KLK15Q9H2R5 256 aa12□□□□□ -0.49
VPS36-207ENST00000611132 CADP27708 2225 aa12□□□□□ -0.49
VPS36-207ENST00000611132 ARHGAP21Q5T5U3 1957 aa12□□□□□ -0.49
VPS36-207ENST00000611132 IGHV2-26A0A0B4J1V2 119 aa11.99□□□□□ -0.49
VPS36-207ENST00000611132 MCRIP2Q9BUT9 160 aaKnown RBP11.99□□□□□ -0.49
VPS36-207ENST00000611132 OBSL1O75147 1896 aa11.99□□□□□ -0.49
VPS36-207ENST00000611132 M0R3E3 92 aa11.99□□□□□ -0.49
VPS36-207ENST00000611132 GGTLC3B5MD39 225 aa11.99□□□□□ -0.49
VPS36-207ENST00000611132 ECSCRQ19T08 205 aa11.99□□□□□ -0.49
VPS36-207ENST00000611132 DEFB123Q8N688 67 aa11.99□□□□□ -0.49
VPS36-207ENST00000611132 EP300Q09472 2414 aaPredicted RBP11.98□□□□□ -0.49
VPS36-207ENST00000611132 IGHV1-18A0A0C4DH31 117 aa11.98□□□□□ -0.49
VPS36-207ENST00000611132 RNASE2P10153 161 aaKnown RBP11.98□□□□□ -0.49
VPS36-207ENST00000611132 CGB1A6NKQ9 187 aa11.98□□□□□ -0.49
VPS36-207ENST00000611132 K7EN84 100 aa11.98□□□□□ -0.49
VPS36-207ENST00000611132 WNT2P09544 360 aa11.98□□□□□ -0.49
VPS36-207ENST00000611132 VWC2Q2TAL6 325 aa11.98□□□□□ -0.49
VPS36-207ENST00000611132 FDCSPQ8NFU4 85 aa11.98□□□□□ -0.49
VPS36-207ENST00000611132 OR1N2Q8NGR9 330 aa11.98□□□□□ -0.49
VPS36-207ENST00000611132 C8orf46Q8TAG6 207 aa11.98□□□□□ -0.49
VPS36-207ENST00000611132 PCNX3Q9H6A9 2034 aa11.98□□□□□ -0.49
VPS36-207ENST00000611132 LHFPL4Q7Z7J7 247 aa11.98□□□□□ -0.49
VPS36-207ENST00000611132 WDR86Q86TI4 376 aa11.98□□□□□ -0.49
VPS36-207ENST00000611132 SIGMAR1Q99720 223 aa11.98□□□□□ -0.49
VPS36-207ENST00000611132 SH2D7A6NKC9 451 aaPredicted RBP11.98□□□□□ -0.49
VPS36-207ENST00000611132 SAMD5Q5TGI4 173 aa11.98□□□□□ -0.49
VPS36-207ENST00000611132 ZNF329Q86UD4 541 aa11.98□□□□□ -0.49
VPS36-207ENST00000611132 SPACA3Q8IXA5 215 aa11.98□□□□□ -0.49
VPS36-207ENST00000611132 SMIM27A0A1W2PRY6 76 aa11.97□□□□□ -0.49
VPS36-207ENST00000611132 C9orf172C9J069 976 aa11.97□□□□□ -0.49
VPS36-207ENST00000611132 F2RL2O00254 374 aa11.97□□□□□ -0.49
VPS36-207ENST00000611132 GPR179Q6PRD1 2367 aa11.97□□□□□ -0.49
VPS36-207ENST00000611132 IGKV1D-17A0A075B6S4 117 aa11.97□□□□□ -0.49
VPS36-207ENST00000611132 ZNF503-AS2A6NEH8 195 aa11.97□□□□□ -0.49
VPS36-207ENST00000611132 PPIAL4CA0A0B4J2A2 164 aa11.97□□□□□ -0.49
VPS36-207ENST00000611132 PPIAL4GP0DN37 164 aa11.97□□□□□ -0.49
VPS36-207ENST00000611132 LEPP41159 167 aa11.97□□□□□ -0.49
VPS36-207ENST00000611132 DTX1Q86Y01 620 aa11.97□□□□□ -0.49
VPS36-207ENST00000611132 TMEM14BQ9NUH8 114 aa11.97□□□□□ -0.49
VPS36-207ENST00000611132 MRPL16Q9NX20 251 aaKnown RBP11.96□□□□□ -0.49
VPS36-207ENST00000611132 RPRMLQ8N4K4 120 aa11.96□□□□□ -0.49
VPS36-207ENST00000611132 CACNA1GO43497 2377 aa11.96□□□□□ -0.49
VPS36-207ENST00000611132 FAM90A27PA6NNH2 459 aa11.96□□□□□ -0.5
VPS36-207ENST00000611132 FAM231DQ6ZW35 169 aa11.96□□□□□ -0.5
VPS36-207ENST00000611132 S4R3C0 116 aa11.96□□□□□ -0.5
VPS36-207ENST00000611132 FGF23Q9GZV9 251 aaPredicted RBP11.96□□□□□ -0.5
VPS36-207ENST00000611132 IGHV3-35A0A0C4DH35 117 aa11.95□□□□□ -0.5
VPS36-207ENST00000611132 TMEM167AQ8TBQ9 72 aa11.95□□□□□ -0.5
VPS36-207ENST00000611132 EXOC3-AS1Q8N2X6 119 aa11.95□□□□□ -0.5
VPS36-207ENST00000611132 IGKV3-7A0A075B6H7 116 aa11.95□□□□□ -0.5
VPS36-207ENST00000611132 TOMM40O96008 361 aa11.95□□□□□ -0.5
VPS36-207ENST00000611132 PPBPP02775 128 aa11.95□□□□□ -0.5
VPS36-207ENST00000611132 RAB9AP51151 201 aa11.95□□□□□ -0.5
VPS36-207ENST00000611132 SMAGPQ0VAQ4 97 aa11.95□□□□□ -0.5
VPS36-207ENST00000611132 KIR3DS1Q14943 382 aa11.95□□□□□ -0.5
VPS36-207ENST00000611132 TRAV8-1A0A0A6YYK1 113 aa11.95□□□□□ -0.5
VPS36-207ENST00000611132 D6R8Y8 96 aa11.95□□□□□ -0.5
VPS36-207ENST00000611132 FAM27E3Q08E93 113 aa11.95□□□□□ -0.5
VPS36-207ENST00000611132 Q6ZVH6 145 aa11.95□□□□□ -0.5
VPS36-207ENST00000611132 CCL25O15444 150 aa11.94□□□□□ -0.5
VPS36-207ENST00000611132 IGKV1-16P04430 117 aa11.94□□□□□ -0.5
VPS36-207ENST00000611132 MAJINQ3KP22 176 aa11.94□□□□□ -0.5
VPS36-207ENST00000611132 PPP1R27Q86WC6 154 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms