RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 DLK1P80370 383 aa9.01□□□□□ -0.97
CTCFL-221ENST00000608903 SERF2P84101 59 aa9.01□□□□□ -0.97
CTCFL-221ENST00000608903 SCGB2A2Q13296 93 aa9.01□□□□□ -0.97
CTCFL-221ENST00000608903 ATP6V1FQ16864 119 aa9.01□□□□□ -0.97
CTCFL-221ENST00000608903 RNASEH2CQ8TDP1 164 aaKnown RBP9.01□□□□□ -0.97
CTCFL-221ENST00000608903 RCC1LQ96I51 464 aaKnown RBP9.01□□□□□ -0.97
CTCFL-221ENST00000608903 TRAV1-1A0A0B4J248 108 aa9.01□□□□□ -0.97
CTCFL-221ENST00000608903 HSPB1P04792 205 aaKnown RBP9.01□□□□□ -0.97
CTCFL-221ENST00000608903 FGF7P21781 194 aa9.01□□□□□ -0.97
CTCFL-221ENST00000608903 CDX1P47902 265 aaPredicted RBP9.01□□□□□ -0.97
CTCFL-221ENST00000608903 FGF8P55075 233 aaPredicted RBP9.01□□□□□ -0.97
CTCFL-221ENST00000608903 ICAM4Q14773 271 aa9.01□□□□□ -0.97
CTCFL-221ENST00000608903 ZNF506Q5JVG8 444 aa9.01□□□□□ -0.97
CTCFL-221ENST00000608903 LCN15Q6UWW0 184 aa9.01□□□□□ -0.97
CTCFL-221ENST00000608903 TREML4Q6UXN2 200 aa9.01□□□□□ -0.97
CTCFL-221ENST00000608903 MRPL41Q8IXM3 137 aaKnown RBP9.01□□□□□ -0.97
CTCFL-221ENST00000608903 RPP25LQ8N5L8 163 aaKnown RBP9.01□□□□□ -0.97
CTCFL-221ENST00000608903 TMEM68Q96MH6 324 aa9.01□□□□□ -0.97
CTCFL-221ENST00000608903 ZNF580Q9UK33 172 aa9.01□□□□□ -0.97
CTCFL-221ENST00000608903 NF1P21359 2839 aa9□□□□□ -0.97
CTCFL-221ENST00000608903 CXorf65A6NEN9 183 aa9□□□□□ -0.97
CTCFL-221ENST00000608903 F8W735 103 aaPredicted RBP9□□□□□ -0.97
CTCFL-221ENST00000608903 SCAF4O95104 1147 aaKnown RBP9□□□□□ -0.97
CTCFL-221ENST00000608903 IGLV1-40P01703 118 aa9□□□□□ -0.97
CTCFL-221ENST00000608903 GPX4P36969 197 aaPredicted RBP9□□□□□ -0.97
CTCFL-221ENST00000608903 OPRK1P41145 380 aa9□□□□□ -0.97
CTCFL-221ENST00000608903 RPS10P46783 165 aaKnown RBP9□□□□□ -0.97
CTCFL-221ENST00000608903 ELOBQ15370 118 aa9□□□□□ -0.97
CTCFL-221ENST00000608903 TMEM41BQ5BJD5 291 aa9□□□□□ -0.97
CTCFL-221ENST00000608903 Q8WTZ3 238 aa9□□□□□ -0.97
CTCFL-221ENST00000608903 MBD3L1Q8WWY6 194 aa9□□□□□ -0.97
CTCFL-221ENST00000608903 TIMM9Q9Y5J7 89 aa9□□□□□ -0.97
CTCFL-221ENST00000608903 MAST4O15021 2626 aa9□□□□□ -0.97
CTCFL-221ENST00000608903 IGKV1D-37A0A075B6S9 117 aa8.99□□□□□ -0.97
CTCFL-221ENST00000608903 YIF1AO95070 293 aa8.99□□□□□ -0.97
CTCFL-221ENST00000608903 IGHV3-23P01764 117 aa8.99□□□□□ -0.97
CTCFL-221ENST00000608903 CXCL1P09341 107 aa8.99□□□□□ -0.97
CTCFL-221ENST00000608903 TAGLN2P37802 199 aaKnown RBP8.99□□□□□ -0.97
CTCFL-221ENST00000608903 NPCDR1Q9BY65 106 aa8.99□□□□□ -0.97
CTCFL-221ENST00000608903 FBXL7Q9UJT9 491 aa8.99□□□□□ -0.97
CTCFL-221ENST00000608903 WDR83OSQ9Y284 106 aa8.99□□□□□ -0.97
CTCFL-221ENST00000608903 LSM4Q9Y4Z0 139 aaKnown RBP8.99□□□□□ -0.97
CTCFL-221ENST00000608903 SMCO3A2RU48 225 aa8.99□□□□□ -0.97
CTCFL-221ENST00000608903 ZNF727A8MUV8 499 aa8.99□□□□□ -0.97
CTCFL-221ENST00000608903 RHOGP84095 191 aa8.99□□□□□ -0.97
CTCFL-221ENST00000608903 PYY3Q5JQD4 70 aa8.99□□□□□ -0.97
CTCFL-221ENST00000608903 HIST2H2BDQ6DRA6 164 aa8.99□□□□□ -0.97
CTCFL-221ENST00000608903 SVIPQ8NHG7 77 aa8.99□□□□□ -0.97
CTCFL-221ENST00000608903 CACNG8Q8WXS5 425 aa8.99□□□□□ -0.97
CTCFL-221ENST00000608903 NPIPB3Q92617 1050 aa8.99□□□□□ -0.97
CTCFL-221ENST00000608903 MGST2Q99735 147 aa8.99□□□□□ -0.97
CTCFL-221ENST00000608903 ZNF355PQ9NSJ1 428 aa8.99□□□□□ -0.97
CTCFL-221ENST00000608903 DOK5Q9P104 306 aa8.99□□□□□ -0.97
CTCFL-221ENST00000608903 RND2P52198 227 aa8.98□□□□□ -0.97
CTCFL-221ENST00000608903 ZNF343Q6P1L6 599 aa8.98□□□□□ -0.97
CTCFL-221ENST00000608903 CYB561D1Q8N8Q1 229 aa8.98□□□□□ -0.97
CTCFL-221ENST00000608903 OR10G4Q8NGN3 311 aa8.98□□□□□ -0.97
CTCFL-221ENST00000608903 TVP23CQ96ET8 276 aa8.98□□□□□ -0.97
CTCFL-221ENST00000608903 ACY3Q96HD9 319 aa8.98□□□□□ -0.97
CTCFL-221ENST00000608903 ZNF414Q96IQ9 312 aa8.98□□□□□ -0.97
CTCFL-221ENST00000608903 LOC102723971A0A1B0GUV8 181 aa8.98□□□□□ -0.97
CTCFL-221ENST00000608903 FNDC10F2Z333 226 aa8.98□□□□□ -0.97
CTCFL-221ENST00000608903 HMGB3O15347 200 aaKnown RBP8.98□□□□□ -0.97
CTCFL-221ENST00000608903 IGHG4P01861 327 aa8.98□□□□□ -0.97
CTCFL-221ENST00000608903 HBE1P02100 147 aa8.98□□□□□ -0.97
CTCFL-221ENST00000608903 TMEM144Q7Z5S9 345 aa8.98□□□□□ -0.97
CTCFL-221ENST00000608903 OR1L6Q8NGR2 347 aa8.98□□□□□ -0.97
CTCFL-221ENST00000608903 NPVFQ9HCQ7 196 aa8.98□□□□□ -0.97
CTCFL-221ENST00000608903 GNG13Q9P2W3 67 aa8.98□□□□□ -0.97
CTCFL-221ENST00000608903 MAP1LC3B2A6NCE7 125 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 SEC14L6B5MCN3 397 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 CORTO00230 105 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 TCF21O43680 179 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 HIST1H2BKO60814 126 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 BRI3O95415 125 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 HIST1H2BJP06899 126 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 HIST1H2BOP23527 126 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 PSMB8P28062 276 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 S100A2P29034 98 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 HIST1H2BBP33778 126 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 NDUFA6P56556 154 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 HIST1H2BDP58876 126 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 HIST1H2BCP62807 126 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 HIST2H2BEQ16778 126 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 ZNF674Q2M3X9 581 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 C15orf32Q32M92 178 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 KHDC3LQ587J8 217 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 GCSAMLQ5JQS6 135 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 FFAR4Q5NUL3 377 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.97□□□□□ -0.97
CTCFL-221ENST00000608903 TMEM116Q8NCL8 245 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 WIPF2Q8TF74 440 aaPredicted RBP8.97□□□□□ -0.97
CTCFL-221ENST00000608903 HIST1H2BHQ93079 126 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 HIST1H2BNQ99877 126 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 HIST1H2BMQ99879 126 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 NIPSNAP3BQ9BS92 247 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 MAP1LC3BQ9GZQ8 125 aa8.97□□□□□ -0.97
CTCFL-221ENST00000608903 GAR1Q9NY12 217 aaKnown RBP8.97□□□□□ -0.97
CTCFL-221ENST00000608903 TGIF2-C20orf24A0A0A6YYL0 155 aa8.96□□□□□ -0.97
CTCFL-221ENST00000608903 ZFP92A6NM28 416 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms