RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 APOBEC3AP31941 199 aaPredicted RBP8.04□□□□□ -1.12
CSMD1-217ENST00000602723 LOXL4Q96JB6 756 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 NBR2O15453 112 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 EFEMP2O95967 443 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 CELA3BP08861 270 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 BTCP35070 178 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 RSPO4Q2I0M5 234 aaPredicted RBP8.04□□□□□ -1.12
CSMD1-217ENST00000602723 FAM89BQ8N5H3 189 aa8.04□□□□□ -1.12
CSMD1-217ENST00000602723 TCRBV4S1A1TA0A5B7 111 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 MYOD1P15172 320 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 ZNF562Q6V9R5 426 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 IFI27L1Q96BM0 104 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 MGST2Q99735 147 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 PLXNA4Q9HCM2 1894 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 SETD2Q9BYW2 2564 aaPredicted RBP8.03□□□□□ -1.12
CSMD1-217ENST00000602723 TMEM238C9JI98 176 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 TMEM144Q7Z5S9 345 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 REPIN1Q9BWE0 567 aaKnown RBP8.03□□□□□ -1.12
CSMD1-217ENST00000602723 F8VVB4 439 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 F8VWA3 439 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 ATP1A1-AS1Q5TC04 95 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 ZNF497Q6ZNH5 498 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 OR9G4Q8NGQ1 327 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 FAM57AQ8TBR7 257 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 FOXL1Q12952 345 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 TMEM155Q4W5P6 130 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 HIST3H2BBQ8N257 126 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 C1orf162Q8NEQ5 155 aaPredicted RBP8.03□□□□□ -1.12
CSMD1-217ENST00000602723 SLC50A1Q9BRV3 221 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 ZNF688P0C7X2 276 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 PVRIGQ6DKI7 326 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 ZIC4Q8N9L1 334 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 RNF126Q9BV68 326 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 F2Z2F3 143 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 RFPL3SP0C7P2 107 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 ATP5L2Q7Z4Y8 100 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 TSKUQ8WUA8 353 aa8.03□□□□□ -1.12
CSMD1-217ENST00000602723 GZMBP10144 247 aa8.02□□□□□ -1.12
CSMD1-217ENST00000602723 S100A7L2Q5SY68 101 aa8.02□□□□□ -1.12
CSMD1-217ENST00000602723 LINC01559Q495D7 138 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 THSD7AQ9UPZ6 1657 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 C19orf48Q6RUI8 117 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 DEPPQ9NTK1 212 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 ZFHX2Q9C0A1 2572 aaPredicted RBP8.02□□□□□ -1.13
CSMD1-217ENST00000602723 IGHV3-64A0A075B6Q5 118 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 A0A0G2JMM0 328 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 A0A1W2PPB8 328 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 KIR3DP1A8MWS1 328 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 SMAD7O15105 426 aaKnown RBP8.02□□□□□ -1.13
CSMD1-217ENST00000602723 IGFBP3P17936 291 aaPredicted RBP8.02□□□□□ -1.13
CSMD1-217ENST00000602723 TIMP3P35625 211 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 MORN3Q6PF18 240 aaPredicted RBP8.02□□□□□ -1.13
CSMD1-217ENST00000602723 SLC25A48Q6ZT89 311 aaKnown RBP8.02□□□□□ -1.13
CSMD1-217ENST00000602723 A0A1W2PRE2 83 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 TNFSF13O75888 250 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 TRBV6-7A0A0A0MS04 114 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 AMBPP02760 352 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 COL4A1P02462 1669 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 PYYP10082 97 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 LY6G6FQ5SQ64 297 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 TEX38Q6PEX7 206 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 ERG28Q9UKR5 140 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 IGHV3-11P01762 117 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 LGALS1P09382 135 aaKnown RBP8.02□□□□□ -1.13
CSMD1-217ENST00000602723 EFNB3Q15768 340 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 PPP1R32Q7Z5V6 425 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 FAM168AQ92567 244 aa8.02□□□□□ -1.13
CSMD1-217ENST00000602723 PRR32B1ATL7 298 aa8.01□□□□□ -1.13
CSMD1-217ENST00000602723 ZXDCQ2QGD7 858 aaPredicted RBP8.01□□□□□ -1.13
CSMD1-217ENST00000602723 TMEM249Q2WGJ8 235 aa8.01□□□□□ -1.13
CSMD1-217ENST00000602723 DLX4Q92988 240 aaPredicted RBP8.01□□□□□ -1.13
CSMD1-217ENST00000602723 FAM201AQ5SY85 155 aa8.01□□□□□ -1.13
CSMD1-217ENST00000602723 IGKV1D-13A0A0B4J2D9 117 aa8.01□□□□□ -1.13
CSMD1-217ENST00000602723 IGKV1-13P0DP09 117 aa8.01□□□□□ -1.13
CSMD1-217ENST00000602723 OCC1Q8TAD7 63 aa8.01□□□□□ -1.13
CSMD1-217ENST00000602723 PEMTQ9UBM1 199 aa8.01□□□□□ -1.13
CSMD1-217ENST00000602723 FAM90A9PA6NNJ1 464 aa8.01□□□□□ -1.13
CSMD1-217ENST00000602723 TIAF1O95411 115 aa8.01□□□□□ -1.13
CSMD1-217ENST00000602723 CELA3AP09093 270 aa8.01□□□□□ -1.13
CSMD1-217ENST00000602723 PLPPR1Q8TBJ4 325 aa8.01□□□□□ -1.13
CSMD1-217ENST00000602723 TMEM242Q9NWH2 141 aa8.01□□□□□ -1.13
CSMD1-217ENST00000602723 TRAV5A0A0B4J249 113 aa8.01□□□□□ -1.13
CSMD1-217ENST00000602723 A0A1W2PRX2 142 aa8.01□□□□□ -1.13
CSMD1-217ENST00000602723 LURAP1LQ8IV03 231 aa8.01□□□□□ -1.13
CSMD1-217ENST00000602723 CST9LQ9H4G1 147 aa8.01□□□□□ -1.13
CSMD1-217ENST00000602723 SMPXQ9UHP9 88 aa8.01□□□□□ -1.13
CSMD1-217ENST00000602723 UPK2O00526 184 aa8.01□□□□□ -1.13
CSMD1-217ENST00000602723 GFRA3O60609 400 aa8.01□□□□□ -1.13
CSMD1-217ENST00000602723 IQCF6A8MYZ5 107 aa8.01□□□□□ -1.13
CSMD1-217ENST00000602723 VDAC2P45880 294 aaPredicted RBP8□□□□□ -1.13
CSMD1-217ENST00000602723 SPSB2Q99619 263 aa8□□□□□ -1.13
CSMD1-217ENST00000602723 ZNF106Q9H2Y7 1883 aaKnown RBP8□□□□□ -1.13
CSMD1-217ENST00000602723 TRGV11A0A075B6L2 103 aa8□□□□□ -1.13
CSMD1-217ENST00000602723 WFDC1Q9HC57 220 aa8□□□□□ -1.13
CSMD1-217ENST00000602723 CRIM1Q9NZV1 1036 aa8□□□□□ -1.13
CSMD1-217ENST00000602723 YPEL1O60688 119 aa8□□□□□ -1.13
CSMD1-217ENST00000602723 ESDP10768 282 aa8□□□□□ -1.13
CSMD1-217ENST00000602723 FAM90A2PQ658T7 463 aa8□□□□□ -1.13
CSMD1-217ENST00000602723 YPEL2Q96QA6 119 aa8□□□□□ -1.13
CSMD1-217ENST00000602723 TMEM190Q8WZ59 177 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms