RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 THAP8Q8NA92 274 aa15.01□□□□□ -0.01
SSBP4-210ENST00000601444 OR51G1Q8NGK1 321 aa15.01□□□□□ -0.01
SSBP4-210ENST00000601444 C19orf73Q9NVV2 129 aa15.01□□□□□ -0.01
SSBP4-210ENST00000601444 DFFBO76075 338 aa15□□□□□ -0.01
SSBP4-210ENST00000601444 PTTG1O95997 202 aa15□□□□□ -0.01
SSBP4-210ENST00000601444 TCF24Q7RTU0 167 aa15□□□□□ -0.01
SSBP4-210ENST00000601444 SBSPONQ8IVN8 264 aa15□□□□□ -0.01
SSBP4-210ENST00000601444 TRGV9Q99603 122 aa15□□□□□ -0.01
SSBP4-210ENST00000601444 SPAG8Q99932 426 aaPredicted RBP15□□□□□ -0.01
SSBP4-210ENST00000601444 SMCO3A2RU48 225 aa14.99□□□□□ -0.01
SSBP4-210ENST00000601444 FAM24AA6NFZ4 105 aa14.99□□□□□ -0.01
SSBP4-210ENST00000601444 OR11H12B2RN74 326 aa14.99□□□□□ -0.01
SSBP4-210ENST00000601444 SSNA1O43805 119 aa14.99□□□□□ -0.01
SSBP4-210ENST00000601444 TFPI2P48307 235 aa14.99□□□□□ -0.01
SSBP4-210ENST00000601444 BCAP31P51572 246 aa14.99□□□□□ -0.01
SSBP4-210ENST00000601444 H2BFSP57053 126 aa14.99□□□□□ -0.01
SSBP4-210ENST00000601444 AKR1C1Q04828 323 aa14.99□□□□□ -0.01
SSBP4-210ENST00000601444 TMEM182Q6ZP80 229 aaPredicted RBP14.99□□□□□ -0.01
SSBP4-210ENST00000601444 GBGT1Q8N5D6 347 aa14.99□□□□□ -0.01
SSBP4-210ENST00000601444 UBQLN2Q9UHD9 624 aa14.99□□□□□ -0.01
SSBP4-210ENST00000601444 U3KQE9 123 aa14.99□□□□□ -0.01
SSBP4-210ENST00000601444 COL7A1Q02388 2944 aa14.99□□□□□ -0.01
SSBP4-210ENST00000601444 A8MZ25 164 aa14.98□□□□□ -0.01
SSBP4-210ENST00000601444 HNRNPCP07910 306 aaKnown RBP eCLIP14.98□□□□□ -0.01
SSBP4-210ENST00000601444 GATA2P23769 480 aaPredicted RBP14.98□□□□□ -0.01
SSBP4-210ENST00000601444 OR10P1Q8NGE3 313 aa14.98□□□□□ -0.01
SSBP4-210ENST00000601444 RNF125Q96EQ8 232 aa14.98□□□□□ -0.01
SSBP4-210ENST00000601444 PBDC1Q9BVG4 233 aa14.98□□□□□ -0.01
SSBP4-210ENST00000601444 TUBA4BQ9H853 241 aa14.98□□□□□ -0.01
SSBP4-210ENST00000601444 ALG5Q9Y673 324 aa14.98□□□□□ -0.01
SSBP4-210ENST00000601444 P2RY1P47900 373 aa14.97□□□□□ -0.01
SSBP4-210ENST00000601444 CAV2P51636 162 aa14.97□□□□□ -0.01
SSBP4-210ENST00000601444 DLK1P80370 383 aa14.97□□□□□ -0.01
SSBP4-210ENST00000601444 TMEM144Q7Z5S9 345 aa14.97□□□□□ -0.01
SSBP4-210ENST00000601444 NMES1Q9C002 83 aa14.97□□□□□ -0.01
SSBP4-210ENST00000601444 A0A1W2PS18 150 aa14.96□□□□□ -0.01
SSBP4-210ENST00000601444 CST7O76096 145 aa14.96□□□□□ -0.01
SSBP4-210ENST00000601444 BMI1P35226 326 aa14.96□□□□□ -0.01
SSBP4-210ENST00000601444 LYZP61626 148 aa14.96□□□□□ -0.01
SSBP4-210ENST00000601444 RPL11P62913 178 aaKnown RBP14.96□□□□□ -0.01
SSBP4-210ENST00000601444 LRRC37A5PQ49AS3 106 aa14.96□□□□□ -0.01
SSBP4-210ENST00000601444 WFDC3Q8IUB2 231 aa14.96□□□□□ -0.01
SSBP4-210ENST00000601444 STPG3Q8N7X2 389 aa14.96□□□□□ -0.01
SSBP4-210ENST00000601444 CITED4Q96RK1 184 aa14.96□□□□□ -0.01
SSBP4-210ENST00000601444 MS4A6AQ9H2W1 248 aa14.96□□□□□ -0.01
SSBP4-210ENST00000601444 SRD5A3Q9H8P0 318 aa14.96□□□□□ -0.01
SSBP4-210ENST00000601444 MGAT4CQ9UBM8 478 aa14.96□□□□□ -0.01
SSBP4-210ENST00000601444 RABAC1Q9UI14 185 aa14.96□□□□□ -0.01
SSBP4-210ENST00000601444 IGSF23A1L1A6 192 aa14.95□□□□□ -0.02
SSBP4-210ENST00000601444 RBMY1BA6NDE4 496 aaKnown RBP14.95□□□□□ -0.02
SSBP4-210ENST00000601444 RBMY1EA6NEQ0 496 aaKnown RBP14.95□□□□□ -0.02
SSBP4-210ENST00000601444 H0YIZ8 118 aa14.95□□□□□ -0.02
SSBP4-210ENST00000601444 DEDDO75618 318 aa14.95□□□□□ -0.02
SSBP4-210ENST00000601444 RBMY1DP0C7P1 496 aaKnown RBP14.95□□□□□ -0.02
SSBP4-210ENST00000601444 PVALBP20472 110 aaPredicted RBP14.95□□□□□ -0.02
SSBP4-210ENST00000601444 ODF3L2Q3SX64 289 aa14.95□□□□□ -0.02
SSBP4-210ENST00000601444 C16orf54Q6UWD8 224 aa14.95□□□□□ -0.02
SSBP4-210ENST00000601444 TMEM231Q9H6L2 316 aa14.95□□□□□ -0.02
SSBP4-210ENST00000601444 LYRM2Q9NU23 88 aaPredicted RBP14.95□□□□□ -0.02
SSBP4-210ENST00000601444 OR4C46A6NHA9 309 aa14.94□□□□□ -0.02
SSBP4-210ENST00000601444 BUB3O43684 328 aa14.94□□□□□ -0.02
SSBP4-210ENST00000601444 FABP1P07148 127 aa14.94□□□□□ -0.02
SSBP4-210ENST00000601444 TMEM252Q8N6L7 170 aa14.94□□□□□ -0.02
SSBP4-210ENST00000601444 TMEM217Q8N7C4 229 aa14.94□□□□□ -0.02
SSBP4-210ENST00000601444 GLMPQ8WWB7 406 aa14.94□□□□□ -0.02
SSBP4-210ENST00000601444 NARS2Q96I59 477 aaKnown RBP14.94□□□□□ -0.02
SSBP4-210ENST00000601444 NPVFQ9HCQ7 196 aa14.94□□□□□ -0.02
SSBP4-210ENST00000601444 OR5AC2Q9NZP5 309 aa14.94□□□□□ -0.02
SSBP4-210ENST00000601444 EIF2B2P49770 351 aaKnown RBP14.93□□□□□ -0.02
SSBP4-210ENST00000601444 SLC38A11Q08AI6 406 aa14.93□□□□□ -0.02
SSBP4-210ENST00000601444 LINC00322Q6ZN03 302 aaPredicted RBP14.93□□□□□ -0.02
SSBP4-210ENST00000601444 CYP2G1PQ6ZSU1 146 aa14.93□□□□□ -0.02
SSBP4-210ENST00000601444 FAM24BQ8N5W8 94 aa14.93□□□□□ -0.02
SSBP4-210ENST00000601444 HUWE1Q7Z6Z7 4374 aaKnown RBP14.92□□□□□ -0.02
SSBP4-210ENST00000601444 FNDC10F2Z333 226 aa14.92□□□□□ -0.02
SSBP4-210ENST00000601444 DNASE2O00115 360 aaPredicted RBP14.92□□□□□ -0.02
SSBP4-210ENST00000601444 CD5P06127 495 aa14.92□□□□□ -0.02
SSBP4-210ENST00000601444 CXCL3P19876 107 aa14.92□□□□□ -0.02
SSBP4-210ENST00000601444 CYCSP99999 105 aaKnown RBP14.92□□□□□ -0.02
SSBP4-210ENST00000601444 ZNF124Q15973 351 aa14.92□□□□□ -0.02
SSBP4-210ENST00000601444 PPP1R1CQ8WVI7 109 aa14.92□□□□□ -0.02
SSBP4-210ENST00000601444 GRAMD2BQ96HH9 432 aa14.92□□□□□ -0.02
SSBP4-210ENST00000601444 NHLRC4P0CG21 123 aaPredicted RBP14.91□□□□□ -0.02
SSBP4-210ENST00000601444 SULT1A1P50225 295 aa14.91□□□□□ -0.02
SSBP4-210ENST00000601444 PAFAH1B2P68402 229 aa14.91□□□□□ -0.02
SSBP4-210ENST00000601444 HAGHQ16775 308 aa14.91□□□□□ -0.02
SSBP4-210ENST00000601444 RGS21Q2M5E4 152 aa14.91□□□□□ -0.02
SSBP4-210ENST00000601444 APRG1Q8IVJ8 170 aa14.91□□□□□ -0.02
SSBP4-210ENST00000601444 BPIFCQ8NFQ6 507 aa14.91□□□□□ -0.02
SSBP4-210ENST00000601444 STXBP6Q8NFX7 210 aa14.91□□□□□ -0.02
SSBP4-210ENST00000601444 GGACTQ9BVM4 153 aa14.91□□□□□ -0.02
SSBP4-210ENST00000601444 RLN2P04090 185 aa14.9□□□□□ -0.02
SSBP4-210ENST00000601444 ORM2P19652 201 aa14.9□□□□□ -0.02
SSBP4-210ENST00000601444 TEPPQ6URK8 271 aa14.9□□□□□ -0.02
SSBP4-210ENST00000601444 RNF126Q9BV68 326 aa14.9□□□□□ -0.02
SSBP4-210ENST00000601444 DOK5Q9P104 306 aa14.9□□□□□ -0.02
SSBP4-210ENST00000601444 E5RGE8 158 aa14.89□□□□□ -0.03
SSBP4-210ENST00000601444 NHLH2Q02577 135 aa14.89□□□□□ -0.03
SSBP4-210ENST00000601444 FCN2Q15485 313 aa14.89□□□□□ -0.03
SSBP4-210ENST00000601444 OR11H7Q8NGC8 314 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms