RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 OR4D5Q8NGN0 318 aa12.71□□□□□ -0.37
HERC3-214ENST00000601319 GLMPQ8WWB7 406 aa12.71□□□□□ -0.37
HERC3-214ENST00000601319 OVOL2Q9BRP0 275 aa12.71□□□□□ -0.37
HERC3-214ENST00000601319 ZFP92A6NM28 416 aa12.7□□□□□ -0.38
HERC3-214ENST00000601319 K7EQG2 157 aa12.7□□□□□ -0.38
HERC3-214ENST00000601319 DNASE2O00115 360 aaPredicted RBP12.7□□□□□ -0.38
HERC3-214ENST00000601319 WRBO00258 174 aa12.7□□□□□ -0.38
HERC3-214ENST00000601319 TCRBP04435 133 aa12.7□□□□□ -0.38
HERC3-214ENST00000601319 NKX2-1P43699 371 aaPredicted RBP12.7□□□□□ -0.38
HERC3-214ENST00000601319 RPL11P62913 178 aaKnown RBP12.7□□□□□ -0.38
HERC3-214ENST00000601319 OR8G2PQ6IF36 304 aa12.7□□□□□ -0.38
HERC3-214ENST00000601319 C16orf54Q6UWD8 224 aa12.7□□□□□ -0.38
HERC3-214ENST00000601319 WFDC3Q8IUB2 231 aa12.7□□□□□ -0.38
HERC3-214ENST00000601319 APRG1Q8IVJ8 170 aa12.7□□□□□ -0.38
HERC3-214ENST00000601319 THAP8Q8NA92 274 aa12.7□□□□□ -0.38
HERC3-214ENST00000601319 RNF125Q96EQ8 232 aa12.7□□□□□ -0.38
HERC3-214ENST00000601319 RABAC1Q9UI14 185 aa12.7□□□□□ -0.38
HERC3-214ENST00000601319 AP2S1P53680 142 aaPredicted RBP12.69□□□□□ -0.38
HERC3-214ENST00000601319 STPG3Q8N7X2 389 aa12.69□□□□□ -0.38
HERC3-214ENST00000601319 DCANP1Q8TF63 244 aa12.69□□□□□ -0.38
HERC3-214ENST00000601319 TRGV9Q99603 122 aa12.69□□□□□ -0.38
HERC3-214ENST00000601319 NUDT15Q9NV35 164 aa12.69□□□□□ -0.38
HERC3-214ENST00000601319 PTTG2Q9NZH5 202 aa12.69□□□□□ -0.38
HERC3-214ENST00000601319 STRAPQ9Y3F4 350 aaKnown RBP12.69□□□□□ -0.38
HERC3-214ENST00000601319 BUB3O43684 328 aa12.68□□□□□ -0.38
HERC3-214ENST00000601319 POLR2GP62487 172 aaKnown RBP eCLIP12.68□□□□□ -0.38
HERC3-214ENST00000601319 ZNF124Q15973 351 aa12.68□□□□□ -0.38
HERC3-214ENST00000601319 SPANXN5Q5MJ07 72 aa12.68□□□□□ -0.38
HERC3-214ENST00000601319 FAM24BQ8N5W8 94 aa12.68□□□□□ -0.38
HERC3-214ENST00000601319 STXBP6Q8NFX7 210 aa12.68□□□□□ -0.38
HERC3-214ENST00000601319 PFDN2Q9UHV9 154 aa12.68□□□□□ -0.38
HERC3-214ENST00000601319 PAIP2BQ9ULR5 123 aaKnown RBP12.68□□□□□ -0.38
HERC3-214ENST00000601319 IGKV1OR2-108A0A075B7D4 117 aa12.67□□□□□ -0.38
HERC3-214ENST00000601319 H3BP45 60 aa12.67□□□□□ -0.38
HERC3-214ENST00000601319 RPL35AP18077 110 aaKnown RBP12.67□□□□□ -0.38
HERC3-214ENST00000601319 ZNF90Q03938 601 aa12.67□□□□□ -0.38
HERC3-214ENST00000601319 ASAH1Q13510 395 aa12.67□□□□□ -0.38
HERC3-214ENST00000601319 IAH1Q2TAA2 248 aaPredicted RBP12.67□□□□□ -0.38
HERC3-214ENST00000601319 DEFB135Q30KP9 77 aa12.67□□□□□ -0.38
HERC3-214ENST00000601319 ZBTB8BQ8NAP8 495 aaPredicted RBP12.67□□□□□ -0.38
HERC3-214ENST00000601319 IL17DQ8TAD2 202 aa12.67□□□□□ -0.38
HERC3-214ENST00000601319 SMIM8Q96KF7 97 aa12.67□□□□□ -0.38
HERC3-214ENST00000601319 WDR12Q9GZL7 423 aaKnown RBP12.67□□□□□ -0.38
HERC3-214ENST00000601319 TBC1D24Q9ULP9 559 aa12.67□□□□□ -0.38
HERC3-214ENST00000601319 TRAV6A0A075B6T7 132 aa12.66□□□□□ -0.38
HERC3-214ENST00000601319 SPRY2O43597 315 aa12.66□□□□□ -0.38
HERC3-214ENST00000601319 SSSCA1O60232 199 aa12.66□□□□□ -0.38
HERC3-214ENST00000601319 CFDP00746 253 aaPredicted RBP12.66□□□□□ -0.38
HERC3-214ENST00000601319 TAS2R30P59541 319 aa12.66□□□□□ -0.38
HERC3-214ENST00000601319 DEFB131AP59861 70 aa12.66□□□□□ -0.38
HERC3-214ENST00000601319 RNF183Q96D59 192 aa12.66□□□□□ -0.38
HERC3-214ENST00000601319 SEPSECSQ9HD40 501 aaKnown RBP12.66□□□□□ -0.38
HERC3-214ENST00000601319 STARD9Q9P2P6 4700 aa12.65□□□□□ -0.38
HERC3-214ENST00000601319 SNRPGP15A8MWD9 76 aa12.65□□□□□ -0.38
HERC3-214ENST00000601319 C1orf194Q5T5A4 169 aa12.65□□□□□ -0.38
HERC3-214ENST00000601319 MZT2BQ6NZ67 158 aa12.65□□□□□ -0.38
HERC3-214ENST00000601319 SIGLEC15Q6ZMC9 328 aa12.65□□□□□ -0.38
HERC3-214ENST00000601319 ACOT7LQ6ZUV0 252 aa12.65□□□□□ -0.38
HERC3-214ENST00000601319 ZNF431Q8TF32 576 aaPredicted RBP12.65□□□□□ -0.38
HERC3-214ENST00000601319 RAB40CQ96S21 281 aa12.65□□□□□ -0.38
HERC3-214ENST00000601319 PBDC1Q9BVG4 233 aa12.65□□□□□ -0.38
HERC3-214ENST00000601319 CSTL1Q9H114 145 aa12.65□□□□□ -0.38
HERC3-214ENST00000601319 NRN1Q9NPD7 142 aa12.65□□□□□ -0.38
HERC3-214ENST00000601319 PSENENQ9NZ42 101 aa12.65□□□□□ -0.38
HERC3-214ENST00000601319 RCL1Q9Y2P8 373 aaKnown RBP12.65□□□□□ -0.38
HERC3-214ENST00000601319 AGRNO00468 2067 aa12.65□□□□□ -0.39
HERC3-214ENST00000601319 FAM240BA0A1B0GVZ2 78 aa12.64□□□□□ -0.39
HERC3-214ENST00000601319 TSC22D2O75157 780 aa12.64□□□□□ -0.39
HERC3-214ENST00000601319 H2AFB2P0C5Z0 115 aa12.64□□□□□ -0.39
HERC3-214ENST00000601319 ZNF688P0C7X2 276 aa12.64□□□□□ -0.39
HERC3-214ENST00000601319 PAX9P55771 341 aa12.64□□□□□ -0.39
HERC3-214ENST00000601319 ZNF846Q147U1 533 aa12.64□□□□□ -0.39
HERC3-214ENST00000601319 LEMD1Q68G75 181 aa12.64□□□□□ -0.39
HERC3-214ENST00000601319 TMEM14EPQ6UXP3 125 aa12.64□□□□□ -0.39
HERC3-214ENST00000601319 GATAD1Q8WUU5 269 aa12.64□□□□□ -0.39
HERC3-214ENST00000601319 FBXL17Q9UF56 701 aa12.64□□□□□ -0.39
HERC3-214ENST00000601319 SLC45A2Q9UMX9 530 aa12.64□□□□□ -0.39
HERC3-214ENST00000601319 PMS2P5A8MQ11 134 aa12.63□□□□□ -0.39
HERC3-214ENST00000601319 FNDC10F2Z333 226 aa12.63□□□□□ -0.39
HERC3-214ENST00000601319 UPK1BO75841 260 aa12.63□□□□□ -0.39
HERC3-214ENST00000601319 LYZP61626 148 aa12.63□□□□□ -0.39
HERC3-214ENST00000601319 AKR1C1Q04828 323 aa12.63□□□□□ -0.39
HERC3-214ENST00000601319 TMEM144Q7Z5S9 345 aa12.63□□□□□ -0.39
HERC3-214ENST00000601319 SEC22CQ9BRL7 303 aa12.63□□□□□ -0.39
HERC3-214ENST00000601319 BATF3Q9NR55 127 aa12.63□□□□□ -0.39
HERC3-214ENST00000601319 DYNC2H1Q8NCM8 4307 aaKnown RBP12.63□□□□□ -0.39
HERC3-214ENST00000601319 SCGB1D2O95969 90 aa12.62□□□□□ -0.39
HERC3-214ENST00000601319 ATF4P18848 351 aaPredicted RBP12.62□□□□□ -0.39
HERC3-214ENST00000601319 DLK1P80370 383 aa12.62□□□□□ -0.39
HERC3-214ENST00000601319 OR2F1Q13607 317 aa12.62□□□□□ -0.39
HERC3-214ENST00000601319 ZFAND6Q6FIF0 208 aa12.62□□□□□ -0.39
HERC3-214ENST00000601319 TRPT1Q86TN4 253 aaKnown RBP12.62□□□□□ -0.39
HERC3-214ENST00000601319 RYR3Q15413 4870 aa12.61□□□□□ -0.39
HERC3-214ENST00000601319 CCSO14618 274 aa12.61□□□□□ -0.39
HERC3-214ENST00000601319 MBPP02686 304 aaPredicted RBP12.61□□□□□ -0.39
HERC3-214ENST00000601319 SNRPD3P62318 126 aaKnown RBP12.61□□□□□ -0.39
HERC3-214ENST00000601319 STHQ8IWL8 128 aa12.61□□□□□ -0.39
HERC3-214ENST00000601319 C12orf45Q8N5I9 185 aaPredicted RBP12.61□□□□□ -0.39
HERC3-214ENST00000601319 BPIFCQ8NFQ6 507 aa12.61□□□□□ -0.39
HERC3-214ENST00000601319 GSKIPQ9P0R6 139 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms