RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 IGKV1OR2-108A0A075B7D4 117 aa12.56□□□□□ -0.4
SHKBP1-219ENST00000599575 TRAV25A0A0B4J276 109 aa12.56□□□□□ -0.4
SHKBP1-219ENST00000599575 IGHV7-4-1A0A0J9YVY3 117 aa12.56□□□□□ -0.4
SHKBP1-219ENST00000599575 SMCO3A2RU48 225 aa12.56□□□□□ -0.4
SHKBP1-219ENST00000599575 MPDU1O75352 247 aa12.56□□□□□ -0.4
SHKBP1-219ENST00000599575 PSG1P11464 419 aa12.56□□□□□ -0.4
SHKBP1-219ENST00000599575 NPPCP23582 126 aa12.56□□□□□ -0.4
SHKBP1-219ENST00000599575 EWSR1Q01844 656 aaKnown RBP eCLIP12.56□□□□□ -0.4
SHKBP1-219ENST00000599575 ARL16Q0P5N6 197 aa12.56□□□□□ -0.4
SHKBP1-219ENST00000599575 S100A7AQ86SG5 101 aa12.56□□□□□ -0.4
SHKBP1-219ENST00000599575 TMEM147Q9BVK8 224 aa12.56□□□□□ -0.4
SHKBP1-219ENST00000599575 MBD2Q9UBB5 411 aa12.56□□□□□ -0.4
SHKBP1-219ENST00000599575 SMPXQ9UHP9 88 aa12.56□□□□□ -0.4
SHKBP1-219ENST00000599575 SLC45A2Q9UMX9 530 aa12.56□□□□□ -0.4
SHKBP1-219ENST00000599575 LSM4Q9Y4Z0 139 aaKnown RBP12.56□□□□□ -0.4
SHKBP1-219ENST00000599575 CCNKO75909 580 aa12.55□□□□□ -0.4
SHKBP1-219ENST00000599575 IL4P05112 153 aa12.55□□□□□ -0.4
SHKBP1-219ENST00000599575 CRYBB3P26998 211 aa12.55□□□□□ -0.4
SHKBP1-219ENST00000599575 RPL12P30050 165 aaKnown RBP12.55□□□□□ -0.4
SHKBP1-219ENST00000599575 DEFB114Q30KQ6 69 aa12.55□□□□□ -0.4
SHKBP1-219ENST00000599575 PXDC1Q5TGL8 231 aa12.55□□□□□ -0.4
SHKBP1-219ENST00000599575 LAMTOR1Q6IAA8 161 aa12.55□□□□□ -0.4
SHKBP1-219ENST00000599575 ADAMTSL5Q6ZMM2 481 aa12.55□□□□□ -0.4
SHKBP1-219ENST00000599575 TMEM217Q8N7C4 229 aa12.55□□□□□ -0.4
SHKBP1-219ENST00000599575 BPIFCQ8NFQ6 507 aa12.55□□□□□ -0.4
SHKBP1-219ENST00000599575 CHAC2Q8WUX2 184 aa12.55□□□□□ -0.4
SHKBP1-219ENST00000599575 WDR89Q96FK6 387 aaPredicted RBP12.55□□□□□ -0.4
SHKBP1-219ENST00000599575 MEGF8Q7Z7M0 2845 aa12.55□□□□□ -0.4
SHKBP1-219ENST00000599575 CMYA5Q8N3K9 4069 aa12.54□□□□□ -0.4
SHKBP1-219ENST00000599575 WI2-2373I1.2A0A1W2PRP0 233 aa12.54□□□□□ -0.4
SHKBP1-219ENST00000599575 ZNF90Q03938 601 aa12.54□□□□□ -0.4
SHKBP1-219ENST00000599575 ZNF546Q86UE3 836 aa12.54□□□□□ -0.4
SHKBP1-219ENST00000599575 OR2T35Q8NGX2 323 aa12.54□□□□□ -0.4
SHKBP1-219ENST00000599575 RNF125Q96EQ8 232 aa12.54□□□□□ -0.4
SHKBP1-219ENST00000599575 GRAMD2BQ96HH9 432 aa12.54□□□□□ -0.4
SHKBP1-219ENST00000599575 RNF24Q9Y225 148 aa12.54□□□□□ -0.4
SHKBP1-219ENST00000599575 WDR83OSQ9Y284 106 aa12.54□□□□□ -0.4
SHKBP1-219ENST00000599575 ZNF256Q9Y2P7 627 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-219ENST00000599575 DFFBO76075 338 aa12.53□□□□□ -0.4
SHKBP1-219ENST00000599575 NHLH2Q02577 135 aa12.53□□□□□ -0.4
SHKBP1-219ENST00000599575 CYP2G1PQ6ZSU1 146 aa12.53□□□□□ -0.4
SHKBP1-219ENST00000599575 OR5C1Q8NGR4 320 aa12.53□□□□□ -0.4
SHKBP1-219ENST00000599575 RHPN1-AS1Q9BWJ2 59 aa12.53□□□□□ -0.4
SHKBP1-219ENST00000599575 VSIRQ9H7M9 311 aa12.53□□□□□ -0.4
SHKBP1-219ENST00000599575 RABAC1Q9UI14 185 aa12.53□□□□□ -0.4
SHKBP1-219ENST00000599575 HSPB11Q9Y547 144 aa12.53□□□□□ -0.4
SHKBP1-219ENST00000599575 CHEK1O14757 476 aa12.52□□□□□ -0.41
SHKBP1-219ENST00000599575 HNRNPCP07910 306 aaKnown RBP eCLIP12.52□□□□□ -0.41
SHKBP1-219ENST00000599575 EIF2B2P49770 351 aaKnown RBP12.52□□□□□ -0.41
SHKBP1-219ENST00000599575 PLP1P60201 277 aa12.52□□□□□ -0.41
SHKBP1-219ENST00000599575 CD300EQ496F6 205 aaPredicted RBP12.52□□□□□ -0.41
SHKBP1-219ENST00000599575 RBPMS2Q6ZRY4 209 aaKnown RBP12.52□□□□□ -0.41
SHKBP1-219ENST00000599575 INO80EQ8NBZ0 244 aaPredicted RBP12.52□□□□□ -0.41
SHKBP1-219ENST00000599575 AQP10Q96PS8 301 aa12.52□□□□□ -0.41
SHKBP1-219ENST00000599575 MLXQ9UH92 298 aa12.52□□□□□ -0.41
SHKBP1-219ENST00000599575 U3KQE9 123 aa12.52□□□□□ -0.41
SHKBP1-219ENST00000599575 TSPAN4O14817 238 aa12.51□□□□□ -0.41
SHKBP1-219ENST00000599575 USF2Q15853 346 aaPredicted RBP12.51□□□□□ -0.41
SHKBP1-219ENST00000599575 C1orf194Q5T5A4 169 aa12.51□□□□□ -0.41
SHKBP1-219ENST00000599575 BTNL8Q6UX41 500 aa12.51□□□□□ -0.41
SHKBP1-219ENST00000599575 KCNIP2Q9NS61 270 aa12.51□□□□□ -0.41
SHKBP1-219ENST00000599575 IGHV3OR16-8A0A075B7F1 116 aa12.5□□□□□ -0.41
SHKBP1-219ENST00000599575 AGPAT2O15120 278 aa12.5□□□□□ -0.41
SHKBP1-219ENST00000599575 ZNF207O43670 478 aaKnown RBP12.5□□□□□ -0.41
SHKBP1-219ENST00000599575 CAMLGP49069 296 aa12.5□□□□□ -0.41
SHKBP1-219ENST00000599575 AP2S1P53680 142 aaPredicted RBP12.5□□□□□ -0.41
SHKBP1-219ENST00000599575 KRTAP10-11P60412 298 aa12.5□□□□□ -0.41
SHKBP1-219ENST00000599575 ATP5SQ99766 215 aa12.5□□□□□ -0.41
SHKBP1-219ENST00000599575 SPAG8Q99932 426 aaPredicted RBP12.5□□□□□ -0.41
SHKBP1-219ENST00000599575 PARD6GQ9BYG4 376 aaPredicted RBP12.5□□□□□ -0.41
SHKBP1-219ENST00000599575 HELTA6NFD8 242 aa12.49□□□□□ -0.41
SHKBP1-219ENST00000599575 GP9P14770 177 aa12.49□□□□□ -0.41
SHKBP1-219ENST00000599575 RPL29P47914 159 aaKnown RBP12.49□□□□□ -0.41
SHKBP1-219ENST00000599575 LYZP61626 148 aa12.49□□□□□ -0.41
SHKBP1-219ENST00000599575 PAFAH1B2P68402 229 aa12.49□□□□□ -0.41
SHKBP1-219ENST00000599575 OR2F1Q13607 317 aa12.49□□□□□ -0.41
SHKBP1-219ENST00000599575 TMEM61Q8N0U2 210 aa12.49□□□□□ -0.41
SHKBP1-219ENST00000599575 PBDC1Q9BVG4 233 aa12.49□□□□□ -0.41
SHKBP1-219ENST00000599575 FBXL17Q9UF56 701 aa12.49□□□□□ -0.41
SHKBP1-219ENST00000599575 ELOA3CA0A087WX78 387 aaPredicted RBP12.48□□□□□ -0.41
SHKBP1-219ENST00000599575 TRAV2A0A0B4J234 112 aa12.48□□□□□ -0.41
SHKBP1-219ENST00000599575 UBE2L5PA0A1B0GUS4 154 aa12.48□□□□□ -0.41
SHKBP1-219ENST00000599575 BUB3O43684 328 aa12.48□□□□□ -0.41
SHKBP1-219ENST00000599575 HYPMO75409 117 aa12.48□□□□□ -0.41
SHKBP1-219ENST00000599575 IFNA5P01569 189 aa12.48□□□□□ -0.41
SHKBP1-219ENST00000599575 LINC00869P0C866 280 aa12.48□□□□□ -0.41
SHKBP1-219ENST00000599575 ZNF266Q14584 549 aa12.48□□□□□ -0.41
SHKBP1-219ENST00000599575 Q6ZRG5 221 aa12.48□□□□□ -0.41
SHKBP1-219ENST00000599575 RNF2Q99496 336 aa12.48□□□□□ -0.41
SHKBP1-219ENST00000599575 MGST2Q99735 147 aa12.48□□□□□ -0.41
SHKBP1-219ENST00000599575 NEURL2Q9BR09 285 aa12.48□□□□□ -0.41
SHKBP1-219ENST00000599575 TNFSF18Q9UNG2 199 aa12.48□□□□□ -0.41
SHKBP1-219ENST00000599575 OR4C46A6NHA9 309 aa12.47□□□□□ -0.41
SHKBP1-219ENST00000599575 ZNF785A8K8V0 405 aa12.47□□□□□ -0.41
SHKBP1-219ENST00000599575 EDN2P20800 178 aa12.47□□□□□ -0.41
SHKBP1-219ENST00000599575 CMC4P56277 68 aaPredicted RBP12.47□□□□□ -0.41
SHKBP1-219ENST00000599575 PRR20EP86478 221 aa12.47□□□□□ -0.41
SHKBP1-219ENST00000599575 PRR20CP86479 221 aa12.47□□□□□ -0.41
SHKBP1-219ENST00000599575 PRR20DP86480 221 aa12.47□□□□□ -0.41
SHKBP1-219ENST00000599575 PRR20BP86481 221 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms