RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 AARDQ4LEZ3 155 aa9.86□□□□□ -0.83
HDAC5-208ENST00000588419 GDF5OSQ5U4N7 250 aa9.86□□□□□ -0.83
HDAC5-208ENST00000588419 NOXA1Q86UR1 476 aa9.86□□□□□ -0.83
HDAC5-208ENST00000588419 CLVS1Q8IUQ0 354 aaPredicted RBP9.86□□□□□ -0.83
HDAC5-208ENST00000588419 UBE2DNLQ8IWF7 75 aa9.86□□□□□ -0.83
HDAC5-208ENST00000588419 OR51S1Q8NGJ8 323 aa9.86□□□□□ -0.83
HDAC5-208ENST00000588419 COQ8AQ8NI60 647 aa9.86□□□□□ -0.83
HDAC5-208ENST00000588419 PPP1R14BQ96C90 147 aa9.86□□□□□ -0.83
HDAC5-208ENST00000588419 RNF125Q96EQ8 232 aa9.86□□□□□ -0.83
HDAC5-208ENST00000588419 NDUFAF3Q9BU61 184 aa9.86□□□□□ -0.83
HDAC5-208ENST00000588419 PAIP2BQ9ULR5 123 aaKnown RBP9.86□□□□□ -0.83
HDAC5-208ENST00000588419 CTDSP2O14595 271 aa9.85□□□□□ -0.83
HDAC5-208ENST00000588419 BUB3O43684 328 aa9.85□□□□□ -0.83
HDAC5-208ENST00000588419 HLA-DRB4P13762 266 aa9.85□□□□□ -0.83
HDAC5-208ENST00000588419 HTN3P15516 51 aa9.85□□□□□ -0.83
HDAC5-208ENST00000588419 MRPS10P82664 201 aaKnown RBP9.85□□□□□ -0.83
HDAC5-208ENST00000588419 SSBP1Q04837 148 aaKnown RBP9.85□□□□□ -0.83
HDAC5-208ENST00000588419 SURF2Q15527 256 aaPredicted RBP9.85□□□□□ -0.83
HDAC5-208ENST00000588419 NMSQ5H8A3 153 aa9.85□□□□□ -0.83
HDAC5-208ENST00000588419 OR4B1Q8NGF8 309 aa9.85□□□□□ -0.83
HDAC5-208ENST00000588419 DTD1Q8TEA8 209 aa9.85□□□□□ -0.83
HDAC5-208ENST00000588419 SMIM4Q8WVI0 70 aa9.85□□□□□ -0.83
HDAC5-208ENST00000588419 SLC35E1Q96K37 410 aa9.85□□□□□ -0.83
HDAC5-208ENST00000588419 PRRT1Q99946 306 aa9.85□□□□□ -0.83
HDAC5-208ENST00000588419 RBKSQ9H477 322 aa9.85□□□□□ -0.83
HDAC5-208ENST00000588419 MCUBQ9NWR8 336 aa9.85□□□□□ -0.83
HDAC5-208ENST00000588419 GPR132Q9UNW8 380 aa9.85□□□□□ -0.83
HDAC5-208ENST00000588419 HLA-DRB4X5D2U9 266 aa9.85□□□□□ -0.83
HDAC5-208ENST00000588419 P0DMU3 169 aa9.84□□□□□ -0.83
HDAC5-208ENST00000588419 FAM231AP0DMU4 169 aa9.84□□□□□ -0.83
HDAC5-208ENST00000588419 FAM231CP0DMU5 169 aa9.84□□□□□ -0.83
HDAC5-208ENST00000588419 AKR1C4P17516 323 aa9.84□□□□□ -0.83
HDAC5-208ENST00000588419 LINC00336Q6ZUF6 198 aa9.84□□□□□ -0.83
HDAC5-208ENST00000588419 LGI3Q8N145 548 aa9.84□□□□□ -0.83
HDAC5-208ENST00000588419 OR1S1Q8NH92 325 aa9.84□□□□□ -0.83
HDAC5-208ENST00000588419 DIRAS2Q96HU8 199 aa9.84□□□□□ -0.83
HDAC5-208ENST00000588419 KCNIP3Q9Y2W7 256 aa9.84□□□□□ -0.83
HDAC5-208ENST00000588419 IGLV2-18A0A075B6J9 118 aa9.83□□□□□ -0.84
HDAC5-208ENST00000588419 SPART-AS1P0CW21 52 aa9.83□□□□□ -0.84
HDAC5-208ENST00000588419 NUP62P37198 522 aaPredicted RBP9.83□□□□□ -0.84
HDAC5-208ENST00000588419 ID1P41134 155 aa9.83□□□□□ -0.84
HDAC5-208ENST00000588419 NKX2-1P43699 371 aaPredicted RBP9.83□□□□□ -0.84
HDAC5-208ENST00000588419 ZNF90Q03938 601 aa9.83□□□□□ -0.84
HDAC5-208ENST00000588419 OR2F1Q13607 317 aa9.83□□□□□ -0.84
HDAC5-208ENST00000588419 KLF9Q13886 244 aaPredicted RBP9.83□□□□□ -0.84
HDAC5-208ENST00000588419 SMCO1Q147U7 214 aa9.83□□□□□ -0.84
HDAC5-208ENST00000588419 SPCS2Q15005 226 aa9.83□□□□□ -0.84
HDAC5-208ENST00000588419 GPR141Q7Z602 305 aa9.83□□□□□ -0.84
HDAC5-208ENST00000588419 POM121L12Q8N7R1 296 aa9.83□□□□□ -0.84
HDAC5-208ENST00000588419 C7orf50Q9BRJ6 194 aaKnown RBP9.83□□□□□ -0.84
HDAC5-208ENST00000588419 WDR12Q9GZL7 423 aaKnown RBP9.83□□□□□ -0.84
HDAC5-208ENST00000588419 TMEM56-RWDD3S4R434 201 aa9.83□□□□□ -0.84
HDAC5-208ENST00000588419 NACAE9PAV3 2078 aa9.83□□□□□ -0.84
HDAC5-208ENST00000588419 PRSS29PA6NIE9 313 aa9.82□□□□□ -0.84
HDAC5-208ENST00000588419 IAPPP10997 89 aa9.82□□□□□ -0.84
HDAC5-208ENST00000588419 CCR6P51684 374 aa9.82□□□□□ -0.84
HDAC5-208ENST00000588419 LYZL2Q7Z4W2 148 aa9.82□□□□□ -0.84
HDAC5-208ENST00000588419 IL22RA2Q969J5 263 aa9.82□□□□□ -0.84
HDAC5-208ENST00000588419 SLC35B3Q9H1N7 401 aa9.82□□□□□ -0.84
HDAC5-208ENST00000588419 SAV1Q9H4B6 383 aaPredicted RBP9.82□□□□□ -0.84
HDAC5-208ENST00000588419 PFDN2Q9UHV9 154 aa9.82□□□□□ -0.84
HDAC5-208ENST00000588419 SCP2D1Q9UJQ7 156 aa9.82□□□□□ -0.84
HDAC5-208ENST00000588419 U3KQ87 197 aa9.82□□□□□ -0.84
HDAC5-208ENST00000588419 KIAA1109Q2LD37 5005 aa9.81□□□□□ -0.84
HDAC5-208ENST00000588419 F6UB75 175 aa9.81□□□□□ -0.84
HDAC5-208ENST00000588419 IFNA21P01568 189 aa9.81□□□□□ -0.84
HDAC5-208ENST00000588419 ANXA3P12429 323 aa9.81□□□□□ -0.84
HDAC5-208ENST00000588419 FAM222AQ5U5X8 452 aa9.81□□□□□ -0.84
HDAC5-208ENST00000588419 OR8G2PQ6IF36 304 aa9.81□□□□□ -0.84
HDAC5-208ENST00000588419 ZNF705AQ6ZN79 300 aaPredicted RBP9.81□□□□□ -0.84
HDAC5-208ENST00000588419 FOXI2Q6ZQN5 318 aa9.81□□□□□ -0.84
HDAC5-208ENST00000588419 SEPSECSQ9HD40 501 aaKnown RBP9.81□□□□□ -0.84
HDAC5-208ENST00000588419 HSPB7Q9UBY9 170 aa9.81□□□□□ -0.84
HDAC5-208ENST00000588419 CACFD1Q9UGQ2 172 aa9.81□□□□□ -0.84
HDAC5-208ENST00000588419 RFNGQ9Y644 331 aa9.81□□□□□ -0.84
HDAC5-208ENST00000588419 IGKV1D-37A0A075B6S9 117 aa9.8□□□□□ -0.84
HDAC5-208ENST00000588419 A0A0B4J2A0 478 aa9.8□□□□□ -0.84
HDAC5-208ENST00000588419 TMEM189A5PLL7 270 aa9.8□□□□□ -0.84
HDAC5-208ENST00000588419 PSMB3P49720 205 aa9.8□□□□□ -0.84
HDAC5-208ENST00000588419 SUPT4H1P63272 117 aaKnown RBP9.8□□□□□ -0.84
HDAC5-208ENST00000588419 GAMTQ14353 236 aa9.8□□□□□ -0.84
HDAC5-208ENST00000588419 EBLN2Q6P2I7 272 aa9.8□□□□□ -0.84
HDAC5-208ENST00000588419 TMED4Q7Z7H5 227 aa9.8□□□□□ -0.84
HDAC5-208ENST00000588419 OR8I2Q8N0Y5 310 aa9.8□□□□□ -0.84
HDAC5-208ENST00000588419 SCGB3A2Q96PL1 93 aa9.8□□□□□ -0.84
HDAC5-208ENST00000588419 MRPS26Q9BYN8 205 aaKnown RBP9.8□□□□□ -0.84
HDAC5-208ENST00000588419 SLC25A22Q9H936 323 aa9.8□□□□□ -0.84
HDAC5-208ENST00000588419 PLA2G2EQ9NZK7 142 aa9.8□□□□□ -0.84
HDAC5-208ENST00000588419 SHPKQ9UHJ6 478 aa9.8□□□□□ -0.84
HDAC5-208ENST00000588419 GOLT1BQ9Y3E0 138 aa9.8□□□□□ -0.84
HDAC5-208ENST00000588419 FAT2Q9NYQ8 4349 aa9.8□□□□□ -0.84
HDAC5-208ENST00000588419 DNAH2Q9P225 4427 aa9.79□□□□□ -0.84
HDAC5-208ENST00000588419 ANKRD20A5PA0PJZ0 165 aa9.79□□□□□ -0.84
HDAC5-208ENST00000588419 ZNF705FA8MVS1 300 aaPredicted RBP9.79□□□□□ -0.84
HDAC5-208ENST00000588419 CTDSPLO15194 276 aa9.79□□□□□ -0.84
HDAC5-208ENST00000588419 HBE1P02100 147 aa9.79□□□□□ -0.84
HDAC5-208ENST00000588419 FABP1P07148 127 aa9.79□□□□□ -0.84
HDAC5-208ENST00000588419 ZNF705DP0CH99 300 aaPredicted RBP9.79□□□□□ -0.84
HDAC5-208ENST00000588419 ZNF705BP0CI00 300 aaPredicted RBP9.79□□□□□ -0.84
HDAC5-208ENST00000588419 RAB11AP62491 216 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms