RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 NAA38Q9BRA0 125 aaKnown RBP12□□□□□ -0.49
CSNK1D-217ENST00000581241 IGKV1-27A0A075B6S5 117 aa11.99□□□□□ -0.49
CSNK1D-217ENST00000581241 NDUFS6O75380 124 aaKnown RBP11.99□□□□□ -0.49
CSNK1D-217ENST00000581241 ZNF664Q8N3J9 261 aa11.99□□□□□ -0.49
CSNK1D-217ENST00000581241 SH2D1AO60880 128 aa11.99□□□□□ -0.49
CSNK1D-217ENST00000581241 ZNF883P0CG24 379 aa11.99□□□□□ -0.49
CSNK1D-217ENST00000581241 NPIPB5A8MRT5 1133 aa11.99□□□□□ -0.49
CSNK1D-217ENST00000581241 LGALS1P09382 135 aaKnown RBP11.99□□□□□ -0.49
CSNK1D-217ENST00000581241 KIR3DS1Q14943 382 aa11.99□□□□□ -0.49
CSNK1D-217ENST00000581241 TPTE2P1Q5T6R2 138 aa11.99□□□□□ -0.49
CSNK1D-217ENST00000581241 ZNF688P0C7X2 276 aa11.99□□□□□ -0.49
CSNK1D-217ENST00000581241 NABP1Q96AH0 204 aa11.99□□□□□ -0.49
CSNK1D-217ENST00000581241 PSG1P11464 419 aa11.99□□□□□ -0.49
CSNK1D-217ENST00000581241 PRB3Q04118 309 aaPredicted RBP11.99□□□□□ -0.49
CSNK1D-217ENST00000581241 TCRAP04437 139 aa11.98□□□□□ -0.49
CSNK1D-217ENST00000581241 ADCYAP1P18509 176 aa11.98□□□□□ -0.49
CSNK1D-217ENST00000581241 PAX8Q06710 450 aa11.98□□□□□ -0.49
CSNK1D-217ENST00000581241 CHD5Q8TDI0 1954 aa11.98□□□□□ -0.49
CSNK1D-217ENST00000581241 EXOC3-AS1Q8N2X6 119 aa11.98□□□□□ -0.49
CSNK1D-217ENST00000581241 RFNGQ9Y644 331 aa11.98□□□□□ -0.49
CSNK1D-217ENST00000581241 IGKV1-5P01602 117 aa11.98□□□□□ -0.49
CSNK1D-217ENST00000581241 NPC2P61916 151 aa11.98□□□□□ -0.49
CSNK1D-217ENST00000581241 PSG3Q16557 428 aa11.98□□□□□ -0.49
CSNK1D-217ENST00000581241 MPV17L2Q567V2 206 aa11.98□□□□□ -0.49
CSNK1D-217ENST00000581241 RPP25LQ8N5L8 163 aaKnown RBP11.98□□□□□ -0.49
CSNK1D-217ENST00000581241 TMEM86BQ8N661 226 aa11.98□□□□□ -0.49
CSNK1D-217ENST00000581241 SCRT1Q9BWW7 348 aa11.98□□□□□ -0.49
CSNK1D-217ENST00000581241 TNFRSF6BO95407 300 aa11.97□□□□□ -0.49
CSNK1D-217ENST00000581241 LINC00158P58513 81 aa11.97□□□□□ -0.49
CSNK1D-217ENST00000581241 SPRR3Q9UBC9 169 aa11.97□□□□□ -0.49
CSNK1D-217ENST00000581241 TIMM23O14925 209 aa11.97□□□□□ -0.49
CSNK1D-217ENST00000581241 SMAD7O15105 426 aaKnown RBP11.97□□□□□ -0.49
CSNK1D-217ENST00000581241 C7orf69Q9H7B7 122 aa11.97□□□□□ -0.49
CSNK1D-217ENST00000581241 CD5LO43866 347 aa11.97□□□□□ -0.49
CSNK1D-217ENST00000581241 ZNF329Q86UD4 541 aa11.97□□□□□ -0.49
CSNK1D-217ENST00000581241 PMS2P5A8MQ11 134 aa11.97□□□□□ -0.49
CSNK1D-217ENST00000581241 TOMM40O96008 361 aa11.97□□□□□ -0.49
CSNK1D-217ENST00000581241 MST1P26927 711 aa11.97□□□□□ -0.49
CSNK1D-217ENST00000581241 QRFPP83859 136 aa11.96□□□□□ -0.49
CSNK1D-217ENST00000581241 C2orf82Q6UX34 121 aa11.96□□□□□ -0.49
CSNK1D-217ENST00000581241 OVOL2Q9BRP0 275 aa11.96□□□□□ -0.49
CSNK1D-217ENST00000581241 POLR2AP24928 1970 aaKnown RBP11.96□□□□□ -0.49
CSNK1D-217ENST00000581241 MLNRO43193 412 aa11.96□□□□□ -0.49
CSNK1D-217ENST00000581241 IGHV1-46P01743 117 aa11.96□□□□□ -0.49
CSNK1D-217ENST00000581241 SIPA1L1O43166 1804 aa11.96□□□□□ -0.49
CSNK1D-217ENST00000581241 DOCK4Q8N1I0 1966 aa11.96□□□□□ -0.49
CSNK1D-217ENST00000581241 SDK1Q7Z5N4 2213 aa11.96□□□□□ -0.49
CSNK1D-217ENST00000581241 CKAP5Q14008 2032 aa11.96□□□□□ -0.49
CSNK1D-217ENST00000581241 LCN12Q6JVE5 192 aa11.96□□□□□ -0.5
CSNK1D-217ENST00000581241 ZNF562Q6V9R5 426 aa11.96□□□□□ -0.5
CSNK1D-217ENST00000581241 COX11Q9Y6N1 276 aa11.96□□□□□ -0.5
CSNK1D-217ENST00000581241 TRBV6-6A0A0A6YYG2 114 aa11.96□□□□□ -0.5
CSNK1D-217ENST00000581241 PRR31Q5SQ13 230 aa11.96□□□□□ -0.5
CSNK1D-217ENST00000581241 PNRC2Q9NPJ4 139 aaKnown RBP11.96□□□□□ -0.5
CSNK1D-217ENST00000581241 PINLYPA6NC86 204 aa11.95□□□□□ -0.5
CSNK1D-217ENST00000581241 TMEM8BA6NDV4 472 aa11.95□□□□□ -0.5
CSNK1D-217ENST00000581241 A0A1W2PRX2 142 aa11.95□□□□□ -0.5
CSNK1D-217ENST00000581241 CRPP02741 224 aa11.95□□□□□ -0.5
CSNK1D-217ENST00000581241 FXYD7P58549 80 aa11.95□□□□□ -0.5
CSNK1D-217ENST00000581241 GFRA4Q9GZZ7 299 aa11.95□□□□□ -0.5
CSNK1D-217ENST00000581241 TRGV4A0A0C4DH28 118 aa11.95□□□□□ -0.5
CSNK1D-217ENST00000581241 S100A7L2Q5SY68 101 aa11.95□□□□□ -0.5
CSNK1D-217ENST00000581241 CD24P25063 80 aa11.95□□□□□ -0.5
CSNK1D-217ENST00000581241 LURAP1LQ8IV03 231 aa11.95□□□□□ -0.5
CSNK1D-217ENST00000581241 IGHV2-26A0A0B4J1V2 119 aa11.95□□□□□ -0.5
CSNK1D-217ENST00000581241 THBDP07204 575 aa11.95□□□□□ -0.5
CSNK1D-217ENST00000581241 GTSF1LQ9H1H1 148 aa11.95□□□□□ -0.5
CSNK1D-217ENST00000581241 HIST1H4AP62805 103 aaKnown RBP11.94□□□□□ -0.5
CSNK1D-217ENST00000581241 GATD1Q8NB37 220 aa11.94□□□□□ -0.5
CSNK1D-217ENST00000581241 DPH3P1Q9H4G8 78 aa11.94□□□□□ -0.5
CSNK1D-217ENST00000581241 POLR3KQ9Y2Y1 108 aaPredicted RBP11.94□□□□□ -0.5
CSNK1D-217ENST00000581241 TRAV3A0A0B4J244 114 aa11.94□□□□□ -0.5
CSNK1D-217ENST00000581241 CHAC1Q9BUX1 264 aa11.94□□□□□ -0.5
CSNK1D-217ENST00000581241 EREGO14944 169 aa11.94□□□□□ -0.5
CSNK1D-217ENST00000581241 HTN3P15516 51 aa11.94□□□□□ -0.5
CSNK1D-217ENST00000581241 RPL15P61313 204 aaKnown RBP11.94□□□□□ -0.5
CSNK1D-217ENST00000581241 FOXF2Q12947 444 aa11.94□□□□□ -0.5
CSNK1D-217ENST00000581241 ADAMTSL5Q6ZMM2 481 aa11.94□□□□□ -0.5
CSNK1D-217ENST00000581241 RNASE6Q93091 150 aaKnown RBP11.94□□□□□ -0.5
CSNK1D-217ENST00000581241 A0A1B0GWJ7 208 aa11.94□□□□□ -0.5
CSNK1D-217ENST00000581241 NTF4P34130 210 aa11.94□□□□□ -0.5
CSNK1D-217ENST00000581241 PRSS22Q9GZN4 317 aa11.94□□□□□ -0.5
CSNK1D-217ENST00000581241 PRB4P10163 310 aaPredicted RBP11.94□□□□□ -0.5
CSNK1D-217ENST00000581241 TEX43Q6ZNM6 134 aa11.94□□□□□ -0.5
CSNK1D-217ENST00000581241 RASL10AQ92737 203 aa11.94□□□□□ -0.5
CSNK1D-217ENST00000581241 GAGE12BA1L429 117 aa11.93□□□□□ -0.5
CSNK1D-217ENST00000581241 OCIAD2Q56VL3 154 aa11.93□□□□□ -0.5
CSNK1D-217ENST00000581241 TMEM200BQ69YZ2 307 aa11.93□□□□□ -0.5
CSNK1D-217ENST00000581241 WFDC12Q8WWY7 111 aa11.93□□□□□ -0.5
CSNK1D-217ENST00000581241 RPUSD1Q9UJJ7 312 aaKnown RBP11.93□□□□□ -0.5
CSNK1D-217ENST00000581241 COLQQ9Y215 455 aaPredicted RBP11.93□□□□□ -0.5
CSNK1D-217ENST00000581241 TRAV8-1A0A0A6YYK1 113 aa11.93□□□□□ -0.5
CSNK1D-217ENST00000581241 CLPSP04118 112 aa11.93□□□□□ -0.5
CSNK1D-217ENST00000581241 CD177Q8N6Q3 437 aa11.93□□□□□ -0.5
CSNK1D-217ENST00000581241 TMEM158Q8WZ71 300 aa11.93□□□□□ -0.5
CSNK1D-217ENST00000581241 A0A0U1RRA0 63 aa11.93□□□□□ -0.5
CSNK1D-217ENST00000581241 A8MWP6 167 aa11.93□□□□□ -0.5
CSNK1D-217ENST00000581241 Q0VG73 95 aa11.93□□□□□ -0.5
CSNK1D-217ENST00000581241 GGNQ86UU5 652 aa11.93□□□□□ -0.5
CSNK1D-217ENST00000581241 BMPERQ8N8U9 685 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms