RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 FAM166AQ6J272 317 aa13.25□□□□□ -0.29
CACNA1A-202ENST00000573710 RPL36ALQ969Q0 106 aaKnown RBP13.25□□□□□ -0.29
CACNA1A-202ENST00000573710 COL11A1P12107 1806 aaPredicted RBP13.25□□□□□ -0.29
CACNA1A-202ENST00000573710 FOXG1P55316 489 aaPredicted RBP13.24□□□□□ -0.29
CACNA1A-202ENST00000573710 KLF5Q13887 457 aaPredicted RBP13.24□□□□□ -0.29
CACNA1A-202ENST00000573710 PEX11BO96011 259 aa13.24□□□□□ -0.29
CACNA1A-202ENST00000573710 POC1AQ8NBT0 407 aa13.24□□□□□ -0.29
CACNA1A-202ENST00000573710 SRSF8Q9BRL6 282 aaKnown RBP13.24□□□□□ -0.29
CACNA1A-202ENST00000573710 SOCS3O14543 225 aa13.24□□□□□ -0.29
CACNA1A-202ENST00000573710 TRACP01848 142 aa13.24□□□□□ -0.29
CACNA1A-202ENST00000573710 CD55P08174 381 aa13.24□□□□□ -0.29
CACNA1A-202ENST00000573710 TMEM144Q7Z5S9 345 aa13.24□□□□□ -0.29
CACNA1A-202ENST00000573710 TCRBV5S1A1TA0A578 114 aa13.24□□□□□ -0.29
CACNA1A-202ENST00000573710 FAM90A20PA6NIJ5 464 aa13.24□□□□□ -0.29
CACNA1A-202ENST00000573710 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.24□□□□□ -0.29
CACNA1A-202ENST00000573710 MBD3L4A6NDZ8 208 aaPredicted RBP13.24□□□□□ -0.29
CACNA1A-202ENST00000573710 MBD3L3A6NE82 208 aaPredicted RBP13.24□□□□□ -0.29
CACNA1A-202ENST00000573710 MBD3L5A6NJ08 208 aaPredicted RBP13.24□□□□□ -0.29
CACNA1A-202ENST00000573710 SRRM4A7MD48 611 aaKnown RBP13.24□□□□□ -0.29
CACNA1A-202ENST00000573710 PYYP10082 97 aa13.24□□□□□ -0.29
CACNA1A-202ENST00000573710 COX6A1P12074 109 aa13.24□□□□□ -0.29
CACNA1A-202ENST00000573710 MBD3L2Q8NHZ7 208 aaPredicted RBP13.24□□□□□ -0.29
CACNA1A-202ENST00000573710 ZMAT4Q9H898 229 aa13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 FOXD3Q9UJU5 478 aaPredicted RBP13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 ARAP2Q8WZ64 1704 aa13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 THBDP07204 575 aa13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 BHLHA9Q7RTU4 235 aa13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 A0A1W2PPC1 479 aa13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 FAM90A10PA6NDY2 464 aa13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 FAM90A8PA6NJQ4 464 aa13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 FAM90A13PP0C7W8 464 aa13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 FAM90A24PP0C7X0 464 aa13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 V9GYH0 126 aa13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 TEX48A0A1B0GUV7 120 aa13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 MPV17L2Q567V2 206 aa13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 IGFL4Q6B9Z1 124 aa13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 ATP6V0BQ99437 205 aa13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 NRN1Q9NPD7 142 aa13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 PKD1L3Q7Z443 1732 aa13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 RPL18AQ02543 176 aaKnown RBP13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 PSG3Q16557 428 aa13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 LAMTOR2Q9Y2Q5 125 aa13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 IZUMO1RA6ND01 250 aa13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 C17orf98A8MV24 154 aa13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 IGHG4P01861 327 aa13.23□□□□□ -0.29
CACNA1A-202ENST00000573710 RASL10AQ92737 203 aa13.22□□□□□ -0.29
CACNA1A-202ENST00000573710 MIXL1Q9H2W2 232 aa13.22□□□□□ -0.29
CACNA1A-202ENST00000573710 ARHGAP32A7KAX9 2087 aa13.22□□□□□ -0.29
CACNA1A-202ENST00000573710 IGLV2-23P01705 113 aa13.22□□□□□ -0.29
CACNA1A-202ENST00000573710 MSRB2Q9Y3D2 182 aa13.22□□□□□ -0.29
CACNA1A-202ENST00000573710 SMKR1H3BMG3 65 aa13.22□□□□□ -0.29
CACNA1A-202ENST00000573710 KIAA0040Q15053 153 aa13.22□□□□□ -0.29
CACNA1A-202ENST00000573710 VMO1Q7Z5L0 202 aa13.22□□□□□ -0.29
CACNA1A-202ENST00000573710 CSTL1Q9H114 145 aa13.22□□□□□ -0.29
CACNA1A-202ENST00000573710 hDV102S1A0JD36 115 aa13.22□□□□□ -0.29
CACNA1A-202ENST00000573710 GNLYP22749 145 aa13.22□□□□□ -0.29
CACNA1A-202ENST00000573710 AMELYQ99218 206 aa13.22□□□□□ -0.29
CACNA1A-202ENST00000573710 DEPPQ9NTK1 212 aa13.22□□□□□ -0.29
CACNA1A-202ENST00000573710 RFPL3SP0C7P2 107 aa13.22□□□□□ -0.29
CACNA1A-202ENST00000573710 STRCQ7RTU9 1775 aa13.22□□□□□ -0.29
CACNA1A-202ENST00000573710 KNCNA6PVL3 124 aa13.22□□□□□ -0.29
CACNA1A-202ENST00000573710 C2orf68Q2NKX9 166 aa13.22□□□□□ -0.29
CACNA1A-202ENST00000573710 WDYHV1Q96HA8 205 aa13.22□□□□□ -0.29
CACNA1A-202ENST00000573710 LHFPL6Q9Y693 200 aa13.22□□□□□ -0.29
CACNA1A-202ENST00000573710 Q6ZT83 130 aa13.21□□□□□ -0.29
CACNA1A-202ENST00000573710 TGFBR3LH3BV60 316 aa13.21□□□□□ -0.29
CACNA1A-202ENST00000573710 TMEM158Q8WZ71 300 aa13.21□□□□□ -0.29
CACNA1A-202ENST00000573710 RBM38Q9H0Z9 239 aaKnown RBP13.21□□□□□ -0.29
CACNA1A-202ENST00000573710 IGLV3-16A0A075B6K0 115 aa13.21□□□□□ -0.29
CACNA1A-202ENST00000573710 TEX22C9J3V5 150 aa13.21□□□□□ -0.29
CACNA1A-202ENST00000573710 EXOC3-AS1Q8N2X6 119 aa13.21□□□□□ -0.29
CACNA1A-202ENST00000573710 C4orf48Q5BLP8 95 aa13.21□□□□□ -0.29
CACNA1A-202ENST00000573710 SPSB3Q6PJ21 355 aa13.21□□□□□ -0.3
CACNA1A-202ENST00000573710 PIP4P2Q8N4L2 257 aa13.21□□□□□ -0.3
CACNA1A-202ENST00000573710 MSRB3Q8IXL7 192 aa13.21□□□□□ -0.3
CACNA1A-202ENST00000573710 FXYD1O00168 92 aa13.2□□□□□ -0.3
CACNA1A-202ENST00000573710 MPLKIPQ8TAP9 179 aa13.2□□□□□ -0.3
CACNA1A-202ENST00000573710 A0A1W2PPV9 198 aa13.2□□□□□ -0.3
CACNA1A-202ENST00000573710 TIAF1O95411 115 aa13.2□□□□□ -0.3
CACNA1A-202ENST00000573710 DTX1Q86Y01 620 aa13.2□□□□□ -0.3
CACNA1A-202ENST00000573710 IFI27L1Q96BM0 104 aa13.2□□□□□ -0.3
CACNA1A-202ENST00000573710 CHAC1Q9BUX1 264 aa13.2□□□□□ -0.3
CACNA1A-202ENST00000573710 PKIBQ9C010 78 aa13.2□□□□□ -0.3
CACNA1A-202ENST00000573710 CD300LDQ6UXZ3 194 aa13.2□□□□□ -0.3
CACNA1A-202ENST00000573710 TMEM170AQ8WVE7 144 aa13.2□□□□□ -0.3
CACNA1A-202ENST00000573710 MBNL3Q9NUK0 354 aaKnown RBP13.2□□□□□ -0.3
CACNA1A-202ENST00000573710 PAPPA2Q9BXP8 1791 aa13.2□□□□□ -0.3
CACNA1A-202ENST00000573710 CTSBP07858 339 aa13.2□□□□□ -0.3
CACNA1A-202ENST00000573710 FAM181AQ8N9Y4 354 aa13.2□□□□□ -0.3
CACNA1A-202ENST00000573710 C1QL4Q86Z23 238 aa13.2□□□□□ -0.3
CACNA1A-202ENST00000573710 BCL6BQ8N143 479 aaPredicted RBP13.2□□□□□ -0.3
CACNA1A-202ENST00000573710 NABP1Q96AH0 204 aa13.2□□□□□ -0.3
CACNA1A-202ENST00000573710 RNF125Q96EQ8 232 aa13.19□□□□□ -0.3
CACNA1A-202ENST00000573710 ADAMTSL1Q8N6G6 1762 aa13.19□□□□□ -0.3
CACNA1A-202ENST00000573710 SMIM8Q96KF7 97 aa13.19□□□□□ -0.3
CACNA1A-202ENST00000573710 CFHR5Q9BXR6 569 aa13.19□□□□□ -0.3
CACNA1A-202ENST00000573710 PLXNB1O43157 2135 aa13.19□□□□□ -0.3
CACNA1A-202ENST00000573710 TBX6O95947 436 aaPredicted RBP13.19□□□□□ -0.3
CACNA1A-202ENST00000573710 CIARTQ8N365 385 aaPredicted RBP13.19□□□□□ -0.3
CACNA1A-202ENST00000573710 IGKV1OR2-108A0A075B7D4 117 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms