RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 STAG3L3P0CL85 134 aa5.49□□□□□ -1.53
CNOT1-222ENST00000570139 SAA1P0DJI8 122 aaPredicted RBP5.49□□□□□ -1.53
CNOT1-222ENST00000570139 SULT1A1P50225 295 aa5.49□□□□□ -1.53
CNOT1-222ENST00000570139 CAV2P51636 162 aa5.49□□□□□ -1.53
CNOT1-222ENST00000570139 MFAP2P55001 183 aa5.49□□□□□ -1.53
CNOT1-222ENST00000570139 POLR2GP62487 172 aaKnown RBP eCLIP5.49□□□□□ -1.53
CNOT1-222ENST00000570139 UTF1Q5T230 341 aa5.49□□□□□ -1.53
CNOT1-222ENST00000570139 HCP5Q6MZN7 132 aa5.49□□□□□ -1.53
CNOT1-222ENST00000570139 RNASEKQ6P5S7 137 aaKnown RBP5.49□□□□□ -1.53
CNOT1-222ENST00000570139 TEX261Q6UWH6 196 aa5.49□□□□□ -1.53
CNOT1-222ENST00000570139 HSD17B13Q7Z5P4 300 aaPredicted RBP5.49□□□□□ -1.53
CNOT1-222ENST00000570139 OR2T10Q8NGZ9 312 aa5.49□□□□□ -1.53
CNOT1-222ENST00000570139 LRRC20Q8TCA0 184 aa5.49□□□□□ -1.53
CNOT1-222ENST00000570139 DTD1Q8TEA8 209 aa5.49□□□□□ -1.53
CNOT1-222ENST00000570139 TBX15Q96SF7 602 aa5.49□□□□□ -1.53
CNOT1-222ENST00000570139 FOXC2Q99958 501 aa5.49□□□□□ -1.53
CNOT1-222ENST00000570139 C11orf1Q9H5F2 150 aa5.49□□□□□ -1.53
CNOT1-222ENST00000570139 ENY2Q9NPA8 101 aa5.49□□□□□ -1.53
CNOT1-222ENST00000570139 MMP26Q9NRE1 261 aa5.49□□□□□ -1.53
CNOT1-222ENST00000570139 TMEM14BQ9NUH8 114 aa5.49□□□□□ -1.53
CNOT1-222ENST00000570139 AUP1Q9Y679 476 aa5.49□□□□□ -1.53
CNOT1-222ENST00000570139 U3KQ87 197 aa5.49□□□□□ -1.53
CNOT1-222ENST00000570139 YLPM1P49750 1951 aaKnown RBP5.49□□□□□ -1.53
CNOT1-222ENST00000570139 CRYBG3Q68DQ2 2970 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 A0A096LNT2 108 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 IGHV1-69DA0A0B4J2H0 117 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 CEBPZOSA8MTT3 80 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 NPFFO15130 113 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 VENTXO95231 258 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 IFNA17P01571 189 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 IGHV1-69P01742 117 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 REG1BP48304 166 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 DYNLT3P51808 116 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 HSPE1P61604 102 aaKnown RBP5.48□□□□□ -1.53
CNOT1-222ENST00000570139 RAB11AP62491 216 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 RPL8P62917 257 aaKnown RBP5.48□□□□□ -1.53
CNOT1-222ENST00000570139 PRCDQ00LT1 54 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 EBI3Q14213 229 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 AANATQ16613 207 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 NDUFA5Q16718 116 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 ATP6V1FQ16864 119 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 ZNF876PQ49A33 203 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 UBAC2Q8NBM4 344 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 OR4C5Q8NGB2 326 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 OR1L8Q8NGR8 309 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 OR2T6Q8NHC8 308 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 NRGNQ92686 78 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 NIPSNAP3BQ9BS92 247 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 GGACTQ9BVM4 153 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 REG4Q9BYZ8 158 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 COMMD5Q9GZQ3 224 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 RBKSQ9H477 322 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 PSENENQ9NZ42 101 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 ZNRD1Q9P1U0 126 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 OR51B2Q9Y5P1 312 aa5.48□□□□□ -1.53
CNOT1-222ENST00000570139 USP9YO00507 2555 aaPredicted RBP5.48□□□□□ -1.53
CNOT1-222ENST00000570139 FBN2P35556 2912 aa5.47□□□□□ -1.53
CNOT1-222ENST00000570139 CELSR2Q9HCU4 2923 aa5.47□□□□□ -1.53
CNOT1-222ENST00000570139 SOX15O60248 233 aa5.47□□□□□ -1.53
CNOT1-222ENST00000570139 NDUFA3O95167 84 aa5.47□□□□□ -1.53
CNOT1-222ENST00000570139 HTR2BP41595 481 aa5.47□□□□□ -1.53
CNOT1-222ENST00000570139 SUB1P53999 127 aaKnown RBP eCLIP5.47□□□□□ -1.53
CNOT1-222ENST00000570139 KRTAP10-9P60411 292 aa5.47□□□□□ -1.53
CNOT1-222ENST00000570139 RAB14P61106 215 aa5.47□□□□□ -1.53
CNOT1-222ENST00000570139 KLRD1Q13241 179 aa5.47□□□□□ -1.53
CNOT1-222ENST00000570139 TMEM14EPQ6UXP3 125 aa5.47□□□□□ -1.53
CNOT1-222ENST00000570139 SSX9Q7RTT3 188 aa5.47□□□□□ -1.53
CNOT1-222ENST00000570139 PPP1R27Q86WC6 154 aa5.47□□□□□ -1.53
CNOT1-222ENST00000570139 BAP18Q8IXM2 172 aa5.47□□□□□ -1.53
CNOT1-222ENST00000570139 COMMD1Q8N668 190 aa5.47□□□□□ -1.53
CNOT1-222ENST00000570139 TMEM252Q8N6L7 170 aa5.47□□□□□ -1.53
CNOT1-222ENST00000570139 NPBQ8NG41 125 aa5.47□□□□□ -1.53
CNOT1-222ENST00000570139 OR1S2Q8NGQ3 325 aa5.47□□□□□ -1.53
CNOT1-222ENST00000570139 SCARB1Q8WTV0 552 aa5.47□□□□□ -1.53
CNOT1-222ENST00000570139 ZNF471Q9BX82 626 aaPredicted RBP5.47□□□□□ -1.53
CNOT1-222ENST00000570139 PARD6GQ9BYG4 376 aaPredicted RBP5.47□□□□□ -1.53
CNOT1-222ENST00000570139 PARLQ9H300 379 aa5.47□□□□□ -1.53
CNOT1-222ENST00000570139 PLSCR3Q9NRY6 295 aa5.47□□□□□ -1.53
CNOT1-222ENST00000570139 CENPEQ02224 2701 aa5.46□□□□□ -1.53
CNOT1-222ENST00000570139 ANKRD17O75179 2603 aaKnown RBP5.46□□□□□ -1.53
CNOT1-222ENST00000570139 CENPVL3A0A0U1RRI6 287 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 FNDC10F2Z333 226 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 CORTO00230 105 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 CYB5BO43169 146 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 IFNA5P01569 189 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 IGLV2-23P01705 113 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 FBP1P09467 338 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 OR8U8P0C7N1 319 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 OR2B8PP59922 312 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 GNB1P62873 340 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 RPL36AP83881 106 aaKnown RBP5.46□□□□□ -1.54
CNOT1-222ENST00000570139 ERHP84090 104 aaKnown RBP5.46□□□□□ -1.54
CNOT1-222ENST00000570139 DIAPH2-AS1Q14236 149 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 PSG5Q15238 335 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 TMEM249Q2WGJ8 235 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 SPANXN5Q5MJ07 72 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 VKORC1L1Q8N0U8 176 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 ZNF680Q8NEM1 530 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 OR10P1Q8NGE3 313 aa5.46□□□□□ -1.54
CNOT1-222ENST00000570139 OR1L6Q8NGR2 347 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms