RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 IDH3GP51553 393 aaPredicted RBP3.26□□□□□ -1.89
LINC00561-201ENST00000565815 PPP1CBP62140 327 aa3.26□□□□□ -1.89
LINC00561-201ENST00000565815 RUNX1Q01196 453 aa3.26□□□□□ -1.89
LINC00561-201ENST00000565815 HERPUD1Q15011 391 aa3.26□□□□□ -1.89
LINC00561-201ENST00000565815 ADIRFQ15847 76 aa3.26□□□□□ -1.89
LINC00561-201ENST00000565815 ZNF726P1Q15940 193 aa3.26□□□□□ -1.89
LINC00561-201ENST00000565815 GABRA6Q16445 453 aa3.26□□□□□ -1.89
LINC00561-201ENST00000565815 FAM58AQ8N1B3 248 aa3.26□□□□□ -1.89
LINC00561-201ENST00000565815 NUP37Q8NFH4 326 aa3.26□□□□□ -1.89
LINC00561-201ENST00000565815 NEK7Q8TDX7 302 aa3.26□□□□□ -1.89
LINC00561-201ENST00000565815 OR5P3Q8WZ94 311 aa3.26□□□□□ -1.89
LINC00561-201ENST00000565815 SRXN1Q9BYN0 137 aa3.26□□□□□ -1.89
LINC00561-201ENST00000565815 PROK2Q9HC23 129 aa3.26□□□□□ -1.89
LINC00561-201ENST00000565815 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.26□□□□□ -1.89
LINC00561-201ENST00000565815 EML6Q6ZMW3 1958 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 IGKV1D-13A0A0B4J2D9 117 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 IGKV1-6A0A0C4DH72 117 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 A0A1B0GV50 99 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 A0A1B0GWJ7 208 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 TMEM210A6NLX4 147 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 TCAPO15273 167 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 MT-CO2P00403 227 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 GYPAP02724 150 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 P0C879 139 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 IGKV1-13P0DP09 117 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 CD1BP29016 333 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 YPEL3P61236 119 aaPredicted RBP3.25□□□□□ -1.89
LINC00561-201ENST00000565815 PAX5Q02548 391 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 TNFRSF9Q07011 255 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 GUSBP1Q15486 140 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 PRAMEF20Q5VT98 475 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 LCN15Q6UWW0 184 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 TOMM20LQ6UXN7 152 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 ADAMTSL5Q6ZMM2 481 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 TMEM144Q7Z5S9 345 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 CALHM1Q8IU99 346 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 ZNF645Q8N7E2 425 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.25□□□□□ -1.89
LINC00561-201ENST00000565815 OR10P1Q8NGE3 313 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 OR56B2PQ8NGI1 322 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 OR51H1Q8NH63 302 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 JSRP1Q96MG2 331 aaPredicted RBP3.25□□□□□ -1.89
LINC00561-201ENST00000565815 OR4C12Q96R67 309 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 C20orf144Q9BQM9 153 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 RTL8AQ9BWD3 113 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 PARLQ9H300 379 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 RBKSQ9H477 322 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 A0A1B0GV90 55 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 FNDC10F2Z333 226 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 G3V3Y1 287 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 SOCS3O14543 225 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 MRPL33O75394 65 aaKnown RBP3.25□□□□□ -1.89
LINC00561-201ENST00000565815 KRASP01116 189 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 MT-ND6P03923 174 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 LINC00614P0C842 121 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 PSG2P11465 335 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 MDKP21741 143 aaPredicted RBP3.25□□□□□ -1.89
LINC00561-201ENST00000565815 LHX2P50458 406 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 ATP5IP56385 69 aaPredicted RBP3.25□□□□□ -1.89
LINC00561-201ENST00000565815 TPPP2P59282 170 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 SELENOTP62341 195 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 TMEM267Q0VDI3 215 aaPredicted RBP3.25□□□□□ -1.89
LINC00561-201ENST00000565815 KLF5Q13887 457 aaPredicted RBP3.25□□□□□ -1.89
LINC00561-201ENST00000565815 C1orf174Q8IYL3 243 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 ZNF664Q8N3J9 261 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 OR10G9Q8NGN4 311 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 OR10G7Q8NGN6 311 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 OR52E5Q8NH55 327 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 OR10D3Q8NH80 312 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 FKBP11Q9NYL4 201 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 MTCH1Q9NZJ7 389 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 CR1P17927 2039 aa3.25□□□□□ -1.89
LINC00561-201ENST00000565815 AKAP9Q99996 3911 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 IGLV7-46A0A075B6I9 117 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 TMEM30CPA0ZSE6 113 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 LRRC30A6NM36 301 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 K7EQG2 157 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 SH2D1BO14796 132 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 CXCL13O43927 109 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 IGKV1-5P01602 117 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 REG1AP05451 166 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 KIR2DS2P43631 304 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 ZNF146Q15072 292 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 USF2Q15853 346 aaPredicted RBP3.24□□□□□ -1.89
LINC00561-201ENST00000565815 RTL8BQ17RB0 113 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 ETFRF1Q6IPR1 90 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 Q6P435 159 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 ERASQ7Z444 233 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 RPP25LQ8N5L8 163 aaKnown RBP3.24□□□□□ -1.89
LINC00561-201ENST00000565815 CNEP1R1Q8N9A8 125 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 RCHY1Q96PM5 261 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 HSD17B10Q99714 261 aaKnown RBP3.24□□□□□ -1.89
LINC00561-201ENST00000565815 RSG1Q9BU20 258 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 DCAF16Q9NXF7 216 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 PXMP4Q9Y6I8 212 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 IGHV4-30-2A0A087WSY4 118 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 IGHV3-15A0A0B4J1V0 119 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 UBE2L5PA0A1B0GUS4 154 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 MDFIC2A0A1B0GVS7 189 aa3.24□□□□□ -1.89
LINC00561-201ENST00000565815 RPL37AP8A6NKH3 93 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms