RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 C11orf44Q8N8P7 122 aa7.55□□□□□ -1.2
CDH1-205ENST00000562836 A8MWV9 139 aa7.55□□□□□ -1.2
CDH1-205ENST00000562836 COX7CP15954 63 aa7.55□□□□□ -1.2
CDH1-205ENST00000562836 PHLDA2Q53GA4 152 aa7.55□□□□□ -1.2
CDH1-205ENST00000562836 LINC01545Q5VT33 79 aa7.55□□□□□ -1.2
CDH1-205ENST00000562836 BMFQ96LC9 184 aa7.55□□□□□ -1.2
CDH1-205ENST00000562836 AGPAT4-IT1Q9H0P7 198 aa7.55□□□□□ -1.2
CDH1-205ENST00000562836 OCIAD1Q9NX40 245 aa7.55□□□□□ -1.2
CDH1-205ENST00000562836 LINC00527Q9UJ94 153 aa7.55□□□□□ -1.2
CDH1-205ENST00000562836 ANAPC1Q9H1A4 1944 aa7.55□□□□□ -1.2
CDH1-205ENST00000562836 SCN3AQ9NY46 2000 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 C11orf94C9JXX5 98 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 NDUFC2O95298 119 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 AMY1AP04745 511 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 GLI4P10075 376 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 HCSTQ9UBK5 93 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 EPDR1Q9UM22 224 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 NCOA6Q14686 2063 aaPredicted RBP7.54□□□□□ -1.2
CDH1-205ENST00000562836 PLXNB2O15031 1838 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 CCL21O00585 134 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 SSSCA1O60232 199 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 HOXB4P17483 251 aaPredicted RBP7.54□□□□□ -1.2
CDH1-205ENST00000562836 GFERP55789 205 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 PLGLB1Q02325 96 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 SFTA2Q6UW10 78 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 FAM57BQ71RH2 274 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 C6orf201Q7Z4U5 140 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 SCAMP4Q969E2 229 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 URB1-AS1Q96HZ7 61 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 ZNF256Q9Y2P7 627 aaPredicted RBP7.54□□□□□ -1.2
CDH1-205ENST00000562836 TIMM13Q9Y5L4 95 aaPredicted RBP7.54□□□□□ -1.2
CDH1-205ENST00000562836 TRBV20OR9-2A0A075B6H5 130 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 IGLV3-10A0A075B6K4 115 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 TCRBV4S1A1TA0A5B7 111 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 HLA-DRB4P13762 266 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 DUTP33316 252 aaKnown RBP7.54□□□□□ -1.2
CDH1-205ENST00000562836 AMN1Q8IY45 258 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 POM121L12Q8N7R1 296 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 SAP30LQ9HAJ7 183 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 HLA-DRB4X5D2U9 266 aa7.54□□□□□ -1.2
CDH1-205ENST00000562836 PAPPA2Q9BXP8 1791 aa7.53□□□□□ -1.2
CDH1-205ENST00000562836 TRBV5-5A0A0J9YX44 114 aa7.53□□□□□ -1.2
CDH1-205ENST00000562836 UNC119Q13432 240 aa7.53□□□□□ -1.2
CDH1-205ENST00000562836 TMEM155Q4W5P6 130 aa7.53□□□□□ -1.2
CDH1-205ENST00000562836 DCAF4L2Q8NA75 395 aa7.53□□□□□ -1.2
CDH1-205ENST00000562836 FGF14Q92915 247 aa7.53□□□□□ -1.2
CDH1-205ENST00000562836 HES7Q9BYE0 225 aa7.53□□□□□ -1.2
CDH1-205ENST00000562836 OBSL1O75147 1896 aa7.53□□□□□ -1.2
CDH1-205ENST00000562836 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.53□□□□□ -1.2
CDH1-205ENST00000562836 SHISA9B4DS77 424 aa7.53□□□□□ -1.2
CDH1-205ENST00000562836 ATP5G3P48201 142 aa7.53□□□□□ -1.2
CDH1-205ENST00000562836 ODF3L1Q8IXM7 274 aa7.53□□□□□ -1.2
CDH1-205ENST00000562836 ZNF645Q8N7E2 425 aa7.53□□□□□ -1.2
CDH1-205ENST00000562836 NPIPB3Q92617 1050 aa7.53□□□□□ -1.2
CDH1-205ENST00000562836 TRBV5-7A0A0A0MS05 114 aa7.52□□□□□ -1.21
CDH1-205ENST00000562836 TRAV8-4A0A0B4J246 113 aa7.52□□□□□ -1.21
CDH1-205ENST00000562836 LYZL6O75951 148 aa7.52□□□□□ -1.21
CDH1-205ENST00000562836 CLDN14O95500 239 aa7.52□□□□□ -1.21
CDH1-205ENST00000562836 TCRAP04437 139 aa7.52□□□□□ -1.21
CDH1-205ENST00000562836 PIRTP0C851 137 aa7.52□□□□□ -1.21
CDH1-205ENST00000562836 SCGB1C2P0DMR2 95 aa7.52□□□□□ -1.21
CDH1-205ENST00000562836 EFNA4P52798 201 aa7.52□□□□□ -1.21
CDH1-205ENST00000562836 ZNF56Q15929 161 aa7.52□□□□□ -1.21
CDH1-205ENST00000562836 VMA21Q3ZAQ7 101 aa7.52□□□□□ -1.21
CDH1-205ENST00000562836 PLPP4Q5VZY2 271 aa7.52□□□□□ -1.21
CDH1-205ENST00000562836 SLC25A22Q9H936 323 aa7.52□□□□□ -1.21
CDH1-205ENST00000562836 PLXNA3P51805 1871 aa7.52□□□□□ -1.21
CDH1-205ENST00000562836 IGKCP01834 107 aa7.52□□□□□ -1.21
CDH1-205ENST00000562836 KLF5Q13887 457 aaPredicted RBP7.52□□□□□ -1.21
CDH1-205ENST00000562836 SHANK2-AS3Q9BTD1 123 aa7.52□□□□□ -1.21
CDH1-205ENST00000562836 CHAC1Q9BUX1 264 aa7.52□□□□□ -1.21
CDH1-205ENST00000562836 PRSS22Q9GZN4 317 aa7.52□□□□□ -1.21
CDH1-205ENST00000562836 HAX1O00165 279 aa7.51□□□□□ -1.21
CDH1-205ENST00000562836 HSPB6O14558 160 aa7.51□□□□□ -1.21
CDH1-205ENST00000562836 NCR2O95944 276 aa7.51□□□□□ -1.21
CDH1-205ENST00000562836 COX6A1P12074 109 aa7.51□□□□□ -1.21
CDH1-205ENST00000562836 LIFP15018 202 aa7.51□□□□□ -1.21
CDH1-205ENST00000562836 UBE2E1P51965 193 aa7.51□□□□□ -1.21
CDH1-205ENST00000562836 DGAT2L6Q6ZPD8 337 aa7.51□□□□□ -1.21
CDH1-205ENST00000562836 RPP25LQ8N5L8 163 aaKnown RBP7.51□□□□□ -1.21
CDH1-205ENST00000562836 UBE2E2Q96LR5 201 aa7.51□□□□□ -1.21
CDH1-205ENST00000562836 A0A0C4DFX4 3053 aa7.51□□□□□ -1.21
CDH1-205ENST00000562836 PTPRDP23468 1912 aa7.51□□□□□ -1.21
CDH1-205ENST00000562836 LOC107984156A0A0G2JMH3 177 aa7.51□□□□□ -1.21
CDH1-205ENST00000562836 H3BTX0 84 aa7.51□□□□□ -1.21
CDH1-205ENST00000562836 ZNF823P16415 610 aa7.51□□□□□ -1.21
CDH1-205ENST00000562836 HERVK_113P61574 105 aa7.51□□□□□ -1.21
CDH1-205ENST00000562836 ZFP2Q6ZN57 461 aa7.51□□□□□ -1.21
CDH1-205ENST00000562836 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.51□□□□□ -1.21
CDH1-205ENST00000562836 MRPL55Q7Z7F7 128 aaKnown RBP7.51□□□□□ -1.21
CDH1-205ENST00000562836 PLXDC1Q8IUK5 500 aa7.51□□□□□ -1.21
CDH1-205ENST00000562836 ARL17AQ8IVW1 177 aa7.51□□□□□ -1.21
CDH1-205ENST00000562836 MRPL20Q9BYC9 149 aaKnown RBP7.51□□□□□ -1.21
CDH1-205ENST00000562836 C11orf1Q9H5F2 150 aa7.51□□□□□ -1.21
CDH1-205ENST00000562836 U3KQE9 123 aa7.51□□□□□ -1.21
CDH1-205ENST00000562836 PHF3Q92576 2039 aaKnown RBP7.51□□□□□ -1.21
CDH1-205ENST00000562836 A0A1B0GVT2 93 aa7.5□□□□□ -1.21
CDH1-205ENST00000562836 C5orf49A4QMS7 147 aa7.5□□□□□ -1.21
CDH1-205ENST00000562836 EPPINO95925 133 aa7.5□□□□□ -1.21
CDH1-205ENST00000562836 CST6Q15828 149 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms