RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 USF2Q15853 346 aaPredicted RBP4.02□□□□□ -1.77
SMAD3-209ENST00000558894 C16orf54Q6UWD8 224 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 FAM219AQ8IW50 185 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 CCDC71LQ8N9Z2 235 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 OR51S1Q8NGJ8 323 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 OR11H2Q8NH07 326 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 PHLDA1Q8WV24 401 aaPredicted RBP4.02□□□□□ -1.77
SMAD3-209ENST00000558894 S100ZQ8WXG8 99 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 RBPMSQ93062 196 aaKnown RBP4.02□□□□□ -1.77
SMAD3-209ENST00000558894 GRAMD2BQ96HH9 432 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 C17orf77Q96MU5 243 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 RARRES2Q99969 163 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 GINS3Q9BRX5 216 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.02□□□□□ -1.77
SMAD3-209ENST00000558894 CCDC59Q9P031 241 aaKnown RBP4.02□□□□□ -1.77
SMAD3-209ENST00000558894 HSPB7Q9UBY9 170 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 CACNG5Q9UF02 275 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 CBY1Q9Y3M2 126 aa4.02□□□□□ -1.77
SMAD3-209ENST00000558894 TRAV30A0A087WSZ9 112 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 ELOA3CA0A087WX78 387 aaPredicted RBP4.01□□□□□ -1.77
SMAD3-209ENST00000558894 H3BMQ9 156 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 LCE2BO14633 110 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 DEFB4AO15263 64 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 BUB3O43684 328 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 PITX3O75364 302 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 DEDDO75618 318 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 ATG12O94817 140 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 SCGB1D2O95969 90 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 CA1P00915 261 aaPredicted RBP4.01□□□□□ -1.77
SMAD3-209ENST00000558894 AKAIN1P0CW23 69 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 TNFSF8P32971 234 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 HTR2BP41595 481 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 P2RY1P47900 373 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 HOXA1P49639 335 aaPredicted RBP4.01□□□□□ -1.77
SMAD3-209ENST00000558894 RND2P52198 227 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 SUB1P53999 127 aaKnown RBP eCLIP4.01□□□□□ -1.77
SMAD3-209ENST00000558894 TMBIM6P55061 237 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 RAB4BP61018 213 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 YPEL3P61236 119 aaPredicted RBP4.01□□□□□ -1.77
SMAD3-209ENST00000558894 SUMO1P63165 101 aaKnown RBP4.01□□□□□ -1.77
SMAD3-209ENST00000558894 DHODHQ02127 395 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 ZNF846Q147U1 533 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 TMEM268Q5VZI3 342 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 LGALS9CQ6DKI2 356 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 LYZL2Q7Z4W2 148 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 SLC24A4Q8NFF2 622 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 C11orf45Q8TAV5 145 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 RNASEH2CQ8TDP1 164 aaKnown RBP4.01□□□□□ -1.77
SMAD3-209ENST00000558894 IL22RA2Q969J5 263 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 RRNAD1Q96FB5 475 aaKnown RBP4.01□□□□□ -1.77
SMAD3-209ENST00000558894 DIRAS2Q96HU8 199 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 HEYLQ9NQ87 328 aaPredicted RBP4.01□□□□□ -1.77
SMAD3-209ENST00000558894 APLNQ9ULZ1 77 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 V9GYH0 126 aa4.01□□□□□ -1.77
SMAD3-209ENST00000558894 IGKV1OR2-108A0A075B7D4 117 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 A0A0B4J2A0 478 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 IGHV4-28A0A0C4DH34 117 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 A0A1W2PS18 150 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 KNCNA6PVL3 124 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 DISC1C4P0D8 188 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 PRSS46E5RG02 174 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 SOCS3O14543 225 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 RGS5O15539 181 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 ZNF688P0C7X2 276 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 PSG1P11464 419 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 SLC25A4P12235 298 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 OR10J1P30954 320 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 DEFB1P60022 68 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 PAFAH1B2P68402 229 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 KLF9Q13886 244 aaPredicted RBP4□□□□□ -1.77
SMAD3-209ENST00000558894 IL18Q14116 193 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 ZNF79Q15937 498 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 GDF5OSQ5U4N7 250 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 GSG1LQ6UXU4 331 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 ZNF767PQ75MW2 155 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 TMEM217Q8N7C4 229 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 STXBP6Q8NFX7 210 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 OR1S2Q8NGQ3 325 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 RAB2BQ8WUD1 216 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 NPIPB3Q92617 1050 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 METTL26Q96S19 204 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 RAB40CQ96S21 281 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 PRRT1Q99946 306 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 BCL7BQ9BQE9 202 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 PDCD10Q9BUL8 212 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 SCRT1Q9BWW7 348 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 HRH4Q9H3N8 390 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 RBKSQ9H477 322 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 SHPKQ9UHJ6 478 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 RABAC1Q9UI14 185 aa4□□□□□ -1.77
SMAD3-209ENST00000558894 C14orf166Q9Y224 244 aaKnown RBP4□□□□□ -1.77
SMAD3-209ENST00000558894 KLK5Q9Y337 293 aaPredicted RBP4□□□□□ -1.77
SMAD3-209ENST00000558894 ZNF98A6NK75 572 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 FAM90A26D6RGX4 464 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 J3QL48 77 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 DNASE2O00115 360 aaPredicted RBP3.99□□□□□ -1.77
SMAD3-209ENST00000558894 NOL3O60936 208 aaKnown RBP3.99□□□□□ -1.77
SMAD3-209ENST00000558894 TOMM40O96008 361 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 IL4P05112 153 aa3.99□□□□□ -1.77
SMAD3-209ENST00000558894 SULT1A3P0DMM9 295 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms