RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 C12orf74Q32Q52 190 aa0.41□□□□□ -2.34
LINC00871-202ENST00000556071 CT55Q8WUE5 264 aa0.41□□□□□ -2.34
LINC00871-202ENST00000556071 C2orf50Q96LR7 162 aa0.41□□□□□ -2.34
LINC00871-202ENST00000556071 TMEM14CQ9P0S9 112 aa0.41□□□□□ -2.34
LINC00871-202ENST00000556071 PLXNA4Q9HCM2 1894 aa0.41□□□□□ -2.34
LINC00871-202ENST00000556071 KMT2DO14686 5537 aa0.4□□□□□ -2.34
LINC00871-202ENST00000556071 OBSL1O75147 1896 aa0.4□□□□□ -2.35
LINC00871-202ENST00000556071 A0A087WUJ7 227 aa0.4□□□□□ -2.35
LINC00871-202ENST00000556071 SMIM17P0DL12 118 aa0.4□□□□□ -2.35
LINC00871-202ENST00000556071 ANP32AP39687 249 aaKnown RBP0.4□□□□□ -2.35
LINC00871-202ENST00000556071 GDPD1Q8N9F7 314 aa0.4□□□□□ -2.35
LINC00871-202ENST00000556071 OR2T10Q8NGZ9 312 aa0.4□□□□□ -2.35
LINC00871-202ENST00000556071 CMSS1Q9BQ75 279 aaKnown RBP0.4□□□□□ -2.35
LINC00871-202ENST00000556071 C14orf105Q9NVL8 296 aa0.4□□□□□ -2.35
LINC00871-202ENST00000556071 FRAS1Q86XX4 4008 aa0.4□□□□□ -2.35
LINC00871-202ENST00000556071 hCG_1818297A0A087WSY0 165 aa0.39□□□□□ -2.35
LINC00871-202ENST00000556071 hADV38S2A0JD32 116 aa0.39□□□□□ -2.35
LINC00871-202ENST00000556071 OR2T8A6NH00 312 aa0.39□□□□□ -2.35
LINC00871-202ENST00000556071 A8MT66 165 aa0.39□□□□□ -2.35
LINC00871-202ENST00000556071 GADD45GO95257 159 aa0.39□□□□□ -2.35
LINC00871-202ENST00000556071 RHOBP62745 196 aa0.39□□□□□ -2.35
LINC00871-202ENST00000556071 IAH1Q2TAA2 248 aaPredicted RBP0.39□□□□□ -2.35
LINC00871-202ENST00000556071 Q8IYB0 196 aa0.39□□□□□ -2.35
LINC00871-202ENST00000556071 BORCS7Q96B45 105 aa0.39□□□□□ -2.35
LINC00871-202ENST00000556071 SLAMF6Q96DU3 332 aa0.39□□□□□ -2.35
LINC00871-202ENST00000556071 SMR3AQ99954 134 aa0.39□□□□□ -2.35
LINC00871-202ENST00000556071 ARHGEF28Q8N1W1 1705 aaKnown RBP0.38□□□□□ -2.35
LINC00871-202ENST00000556071 DHFRP00374 187 aa0.38□□□□□ -2.35
LINC00871-202ENST00000556071 OR6V1Q8N148 313 aa0.38□□□□□ -2.35
LINC00871-202ENST00000556071 ST6GALNAC3Q8NDV1 305 aa0.38□□□□□ -2.35
LINC00871-202ENST00000556071 TMEM254Q8TBM7 123 aa0.38□□□□□ -2.35
LINC00871-202ENST00000556071 RNASE7Q9H1E1 156 aaKnown RBP0.38□□□□□ -2.35
LINC00871-202ENST00000556071 TAS2R7Q9NYW3 318 aa0.38□□□□□ -2.35
LINC00871-202ENST00000556071 MUC4Q99102 2169 aa0.38□□□□□ -2.35
LINC00871-202ENST00000556071 IGHV1-58A0A0C4DH39 117 aa0.37□□□□□ -2.35
LINC00871-202ENST00000556071 TCRBV4S1A1TA0A5B7 111 aa0.37□□□□□ -2.35
LINC00871-202ENST00000556071 TLCD2A6NGC4 264 aa0.37□□□□□ -2.35
LINC00871-202ENST00000556071 KPNA3O00505 521 aaPredicted RBP0.37□□□□□ -2.35
LINC00871-202ENST00000556071 PPIBP23284 216 aaKnown RBP0.37□□□□□ -2.35
LINC00871-202ENST00000556071 DYNLT1P63172 113 aa0.37□□□□□ -2.35
LINC00871-202ENST00000556071 SLC25A40Q8TBP6 338 aa0.37□□□□□ -2.35
LINC00871-202ENST00000556071 CCDC42Q96M95 316 aa0.37□□□□□ -2.35
LINC00871-202ENST00000556071 PRADC1Q9BSG0 188 aa0.37□□□□□ -2.35
LINC00871-202ENST00000556071 UQCC1Q9NVA1 299 aa0.37□□□□□ -2.35
LINC00871-202ENST00000556071 FBXO5Q9UKT4 447 aa0.37□□□□□ -2.35
LINC00871-202ENST00000556071 NOSIPQ9Y314 301 aaKnown RBP0.37□□□□□ -2.35
LINC00871-202ENST00000556071 RIMBP3CA6NJZ7 1639 aa0.36□□□□□ -2.35
LINC00871-202ENST00000556071 RIMBP3BA6NNM3 1639 aa0.36□□□□□ -2.35
LINC00871-202ENST00000556071 RIMBP3Q9UFD9 1639 aa0.36□□□□□ -2.35
LINC00871-202ENST00000556071 CYB5BO43169 146 aa0.36□□□□□ -2.35
LINC00871-202ENST00000556071 SERPINE1P05121 402 aa0.36□□□□□ -2.35
LINC00871-202ENST00000556071 OMPP47874 163 aa0.36□□□□□ -2.35
LINC00871-202ENST00000556071 DEFA3P59666 94 aa0.36□□□□□ -2.35
LINC00871-202ENST00000556071 Q6Q795 121 aa0.36□□□□□ -2.35
LINC00871-202ENST00000556071 SLC30A7Q8NEW0 376 aa0.36□□□□□ -2.35
LINC00871-202ENST00000556071 OR2T35Q8NGX2 323 aa0.36□□□□□ -2.35
LINC00871-202ENST00000556071 TMEM133Q9H2Q1 129 aa0.36□□□□□ -2.35
LINC00871-202ENST00000556071 SMIM23A6NLE4 172 aa0.35□□□□□ -2.35
LINC00871-202ENST00000556071 NUPR1O60356 82 aa0.35□□□□□ -2.35
LINC00871-202ENST00000556071 LYPLA2O95372 231 aa0.35□□□□□ -2.35
LINC00871-202ENST00000556071 SRIP30626 198 aa0.35□□□□□ -2.35
LINC00871-202ENST00000556071 AP3S2P59780 193 aa0.35□□□□□ -2.35
LINC00871-202ENST00000556071 KRTAP26-1Q6PEX3 210 aa0.35□□□□□ -2.35
LINC00871-202ENST00000556071 TRAPPC5Q8IUR0 188 aa0.35□□□□□ -2.35
LINC00871-202ENST00000556071 PLPP5Q8NEB5 264 aa0.35□□□□□ -2.35
LINC00871-202ENST00000556071 GPER1Q99527 375 aa0.35□□□□□ -2.35
LINC00871-202ENST00000556071 TVP23BQ9NYZ1 205 aa0.35□□□□□ -2.35
LINC00871-202ENST00000556071 C8GP07360 202 aa0.34□□□□□ -2.36
LINC00871-202ENST00000556071 RNASE4P34096 147 aaKnown RBP0.34□□□□□ -2.36
LINC00871-202ENST00000556071 FAM172AQ8WUF8 416 aa0.34□□□□□ -2.36
LINC00871-202ENST00000556071 RNF122Q9H9V4 155 aa0.34□□□□□ -2.36
LINC00871-202ENST00000556071 ORMDL1Q9P0S3 153 aa0.34□□□□□ -2.36
LINC00871-202ENST00000556071 PRELID3BQ9Y3B1 194 aa0.34□□□□□ -2.36
LINC00871-202ENST00000556071 ADCY9O60503 1353 aa0.33□□□□□ -2.36
LINC00871-202ENST00000556071 FREM3P0C091 2139 aa0.33□□□□□ -2.36
LINC00871-202ENST00000556071 EIF5AP63241 154 aaKnown RBP0.33□□□□□ -2.36
LINC00871-202ENST00000556071 UCK1Q9HA47 277 aa0.33□□□□□ -2.36
LINC00871-202ENST00000556071 J3QRK9 145 aa0.32□□□□□ -2.36
LINC00871-202ENST00000556071 TIMM17BO60830 172 aa0.32□□□□□ -2.36
LINC00871-202ENST00000556071 RPS17P08708 135 aaKnown RBP0.32□□□□□ -2.36
LINC00871-202ENST00000556071 PTRHD1Q6GMV3 140 aaKnown RBP0.32□□□□□ -2.36
LINC00871-202ENST00000556071 OR52L1Q8NGH7 329 aa0.32□□□□□ -2.36
LINC00871-202ENST00000556071 LINC00052Q96N35 136 aa0.32□□□□□ -2.36
LINC00871-202ENST00000556071 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.32□□□□□ -2.36
LINC00871-202ENST00000556071 FANCMQ8IYD8 2048 aa0.31□□□□□ -2.36
LINC00871-202ENST00000556071 ZGRF1Q86YA3 2104 aa0.31□□□□□ -2.36
LINC00871-202ENST00000556071 SMIM9A6NGZ8 99 aa0.31□□□□□ -2.36
LINC00871-202ENST00000556071 RANP62826 216 aaKnown RBP0.31□□□□□ -2.36
LINC00871-202ENST00000556071 AESQ08117 197 aa0.31□□□□□ -2.36
LINC00871-202ENST00000556071 EDDM3AQ14507 147 aa0.31□□□□□ -2.36
LINC00871-202ENST00000556071 OR11H6Q8NGC7 330 aa0.31□□□□□ -2.36
LINC00871-202ENST00000556071 STAG3L4Q8TBR4 150 aa0.31□□□□□ -2.36
LINC00871-202ENST00000556071 TP53RKQ96S44 253 aa0.31□□□□□ -2.36
LINC00871-202ENST00000556071 TRIM4Q9C037 500 aa0.31□□□□□ -2.36
LINC00871-202ENST00000556071 PSTPIP2Q9H939 334 aa0.31□□□□□ -2.36
LINC00871-202ENST00000556071 IDI2-AS1Q9NZ38 188 aa0.31□□□□□ -2.36
LINC00871-202ENST00000556071 SPTBP11277 2137 aa0.31□□□□□ -2.36
LINC00871-202ENST00000556071 PIK3C2GO75747 1445 aa0.3□□□□□ -2.36
LINC00871-202ENST00000556071 A0A0D9SG42 100 aa0.3□□□□□ -2.36
LINC00871-202ENST00000556071 PDE6DO43924 150 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms