RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 MLXQ9UH92 298 aa10.49□□□□□ -0.73
TUBB3-202ENST00000553656 SMPXQ9UHP9 88 aa10.49□□□□□ -0.73
TUBB3-202ENST00000553656 PFDN2Q9UHV9 154 aa10.49□□□□□ -0.73
TUBB3-202ENST00000553656 IGKV1D-37A0A075B6S9 117 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 IGHV3-49A0A0A0MS15 119 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 A0A1W2PS18 150 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 H0YIZ8 118 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 PRB2P02812 416 aaPredicted RBP10.48□□□□□ -0.73
TUBB3-202ENST00000553656 GP9P14770 177 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 RAP2BP61225 183 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 LYZP61626 148 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 EWSR1Q01844 656 aaKnown RBP eCLIP10.48□□□□□ -0.73
TUBB3-202ENST00000553656 BAXQ07812 192 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 OR2F1Q13607 317 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 RAB31Q13636 194 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 GUCA2BQ16661 112 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 LAMTOR1Q6IAA8 161 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 TEPPQ6URK8 271 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 BPIFCQ8NFQ6 507 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 RNF125Q96EQ8 232 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 GRAMD2BQ96HH9 432 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 ZNF414Q96IQ9 312 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 PBDC1Q9BVG4 233 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 TMEM147Q9BVK8 224 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 RHPN1-AS1Q9BWJ2 59 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 UQCC1Q9NVA1 299 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 AURKAIP1Q9NWT8 199 aaPredicted RBP10.48□□□□□ -0.73
TUBB3-202ENST00000553656 RABAC1Q9UI14 185 aa10.48□□□□□ -0.73
TUBB3-202ENST00000553656 CMYA5Q8N3K9 4069 aa10.47□□□□□ -0.73
TUBB3-202ENST00000553656 IGKV1OR2-108A0A075B7D4 117 aa10.47□□□□□ -0.73
TUBB3-202ENST00000553656 HNRNPCP07910 306 aaKnown RBP eCLIP10.47□□□□□ -0.73
TUBB3-202ENST00000553656 NUP62P37198 522 aaPredicted RBP10.47□□□□□ -0.73
TUBB3-202ENST00000553656 ATP6V1FQ16864 119 aa10.47□□□□□ -0.73
TUBB3-202ENST00000553656 CYP2G1PQ6ZSU1 146 aa10.47□□□□□ -0.73
TUBB3-202ENST00000553656 PRR25Q96S07 402 aa10.47□□□□□ -0.73
TUBB3-202ENST00000553656 RNF126Q9BV68 326 aa10.47□□□□□ -0.73
TUBB3-202ENST00000553656 SELENOKQ9Y6D0 94 aa10.47□□□□□ -0.73
TUBB3-202ENST00000553656 NBEAL1Q6ZS30 2694 aa10.47□□□□□ -0.73
TUBB3-202ENST00000553656 IGHV3OR16-13A0A075B7E8 117 aa10.46□□□□□ -0.73
TUBB3-202ENST00000553656 IGHV3-74A0A0B4J1X5 117 aa10.46□□□□□ -0.73
TUBB3-202ENST00000553656 TRAV25A0A0B4J276 109 aa10.46□□□□□ -0.73
TUBB3-202ENST00000553656 UBE2L5PA0A1B0GUS4 154 aa10.46□□□□□ -0.73
TUBB3-202ENST00000553656 CHEK1O14757 476 aa10.46□□□□□ -0.73
TUBB3-202ENST00000553656 CD5P06127 495 aa10.46□□□□□ -0.73
TUBB3-202ENST00000553656 S100A7P31151 101 aa10.46□□□□□ -0.73
TUBB3-202ENST00000553656 SELENOTP62341 195 aa10.46□□□□□ -0.73
TUBB3-202ENST00000553656 USF2Q15853 346 aaPredicted RBP10.46□□□□□ -0.73
TUBB3-202ENST00000553656 ZNF546Q86UE3 836 aa10.46□□□□□ -0.73
TUBB3-202ENST00000553656 GTSCR1Q86UQ5 136 aa10.46□□□□□ -0.73
TUBB3-202ENST00000553656 TMEM61Q8N0U2 210 aa10.46□□□□□ -0.73
TUBB3-202ENST00000553656 PPP1R14BQ96C90 147 aa10.46□□□□□ -0.73
TUBB3-202ENST00000553656 IGHV3-66A0A0C4DH42 116 aa10.45□□□□□ -0.74
TUBB3-202ENST00000553656 WI2-2373I1.2A0A1W2PRP0 233 aa10.45□□□□□ -0.74
TUBB3-202ENST00000553656 IZUMO1RA6ND01 250 aa10.45□□□□□ -0.74
TUBB3-202ENST00000553656 CRYBB3P26998 211 aa10.45□□□□□ -0.74
TUBB3-202ENST00000553656 RPL12P30050 165 aaKnown RBP10.45□□□□□ -0.74
TUBB3-202ENST00000553656 EIF2B2P49770 351 aaKnown RBP10.45□□□□□ -0.74
TUBB3-202ENST00000553656 RPL11P62913 178 aaKnown RBP10.45□□□□□ -0.74
TUBB3-202ENST00000553656 NHLH2Q02577 135 aa10.45□□□□□ -0.74
TUBB3-202ENST00000553656 CLINT1Q14677 625 aa10.45□□□□□ -0.74
TUBB3-202ENST00000553656 OR5C1Q8NGR4 320 aa10.45□□□□□ -0.74
TUBB3-202ENST00000553656 OR2T35Q8NGX2 323 aa10.45□□□□□ -0.74
TUBB3-202ENST00000553656 ST8SIA2Q92186 375 aa10.45□□□□□ -0.74
TUBB3-202ENST00000553656 RNF2Q99496 336 aa10.45□□□□□ -0.74
TUBB3-202ENST00000553656 FBN3Q75N90 2809 aa10.45□□□□□ -0.74
TUBB3-202ENST00000553656 NOTCH1P46531 2555 aa10.45□□□□□ -0.74
TUBB3-202ENST00000553656 APOHP02749 345 aaPredicted RBP10.44□□□□□ -0.74
TUBB3-202ENST00000553656 LINC00869P0C866 280 aa10.44□□□□□ -0.74
TUBB3-202ENST00000553656 LYL1P12980 280 aa10.44□□□□□ -0.74
TUBB3-202ENST00000553656 PAFAH1B2P68402 229 aa10.44□□□□□ -0.74
TUBB3-202ENST00000553656 VWC2Q2TAL6 325 aa10.44□□□□□ -0.74
TUBB3-202ENST00000553656 TCF24Q7RTU0 167 aa10.44□□□□□ -0.74
TUBB3-202ENST00000553656 S100A7AQ86SG5 101 aa10.44□□□□□ -0.74
TUBB3-202ENST00000553656 MRAPQ8TCY5 172 aa10.44□□□□□ -0.74
TUBB3-202ENST00000553656 SPAG8Q99932 426 aaPredicted RBP10.44□□□□□ -0.74
TUBB3-202ENST00000553656 VSIRQ9H7M9 311 aa10.44□□□□□ -0.74
TUBB3-202ENST00000553656 WDR83OSQ9Y284 106 aa10.44□□□□□ -0.74
TUBB3-202ENST00000553656 LSM4Q9Y4Z0 139 aaKnown RBP10.44□□□□□ -0.74
TUBB3-202ENST00000553656 HSPB11Q9Y547 144 aa10.44□□□□□ -0.74
TUBB3-202ENST00000553656 TSPAN4O14817 238 aa10.43□□□□□ -0.74
TUBB3-202ENST00000553656 AGPAT2O15120 278 aa10.43□□□□□ -0.74
TUBB3-202ENST00000553656 MPDU1O75352 247 aa10.43□□□□□ -0.74
TUBB3-202ENST00000553656 DFFBO76075 338 aa10.43□□□□□ -0.74
TUBB3-202ENST00000553656 ORM2P19652 201 aa10.43□□□□□ -0.74
TUBB3-202ENST00000553656 FGF7P21781 194 aa10.43□□□□□ -0.74
TUBB3-202ENST00000553656 GATA2P23769 480 aaPredicted RBP10.43□□□□□ -0.74
TUBB3-202ENST00000553656 CAMLGP49069 296 aa10.43□□□□□ -0.74
TUBB3-202ENST00000553656 OR1B1Q8NGR6 318 aa10.43□□□□□ -0.74
TUBB3-202ENST00000553656 IGKV3-7A0A075B6H7 116 aa10.42□□□□□ -0.74
TUBB3-202ENST00000553656 FXYD6-FXYD2A0A087WZ82 144 aa10.42□□□□□ -0.74
TUBB3-202ENST00000553656 HELTA6NFD8 242 aa10.42□□□□□ -0.74
TUBB3-202ENST00000553656 OR4C46A6NHA9 309 aa10.42□□□□□ -0.74
TUBB3-202ENST00000553656 HYPMO75409 117 aa10.42□□□□□ -0.74
TUBB3-202ENST00000553656 CD81P60033 236 aa10.42□□□□□ -0.74
TUBB3-202ENST00000553656 DEFB121Q5J5C9 76 aa10.42□□□□□ -0.74
TUBB3-202ENST00000553656 INO80EQ8NBZ0 244 aaPredicted RBP10.42□□□□□ -0.74
TUBB3-202ENST00000553656 MGST2Q99735 147 aa10.42□□□□□ -0.74
TUBB3-202ENST00000553656 ATP5SQ99766 215 aa10.42□□□□□ -0.74
TUBB3-202ENST00000553656 SMIM3Q9BZL3 60 aa10.42□□□□□ -0.74
TUBB3-202ENST00000553656 DOK5Q9P104 306 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms