RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 TRAV40A0A0B4J280 105 aa7.41□□□□□ -1.22
GTF2A1-203ENST00000553612 PRB2P02812 416 aaPredicted RBP7.41□□□□□ -1.22
GTF2A1-203ENST00000553612 LEAP2Q969E1 77 aa7.41□□□□□ -1.22
GTF2A1-203ENST00000553612 C8orf31Q8N9H6 132 aa7.41□□□□□ -1.22
GTF2A1-203ENST00000553612 RGPD5Q99666 1765 aa7.41□□□□□ -1.22
GTF2A1-203ENST00000553612 TMEM14DPA8MWL7 114 aa7.41□□□□□ -1.22
GTF2A1-203ENST00000553612 LYPD3O95274 346 aa7.41□□□□□ -1.22
GTF2A1-203ENST00000553612 C10orf35Q96D05 121 aa7.41□□□□□ -1.22
GTF2A1-203ENST00000553612 AJUBAQ96IF1 538 aa7.41□□□□□ -1.22
GTF2A1-203ENST00000553612 LINC00479Q96M42 142 aa7.41□□□□□ -1.22
GTF2A1-203ENST00000553612 MORN3Q6PF18 240 aaPredicted RBP7.4□□□□□ -1.22
GTF2A1-203ENST00000553612 C20orf173Q96LM9 149 aa7.4□□□□□ -1.22
GTF2A1-203ENST00000553612 RPP21Q9H633 154 aaKnown RBP7.4□□□□□ -1.22
GTF2A1-203ENST00000553612 SIGLEC1Q9BZZ2 1709 aa7.4□□□□□ -1.22
GTF2A1-203ENST00000553612 NUP98P52948 1817 aa7.4□□□□□ -1.22
GTF2A1-203ENST00000553612 PHF3Q92576 2039 aaKnown RBP7.4□□□□□ -1.22
GTF2A1-203ENST00000553612 KIF26BQ2KJY2 2108 aa7.4□□□□□ -1.22
GTF2A1-203ENST00000553612 IGHV1-45A0A0A0MS14 117 aa7.4□□□□□ -1.22
GTF2A1-203ENST00000553612 OXLD1Q5BKU9 147 aa7.4□□□□□ -1.22
GTF2A1-203ENST00000553612 DOCK6Q96HP0 2047 aa7.4□□□□□ -1.22
GTF2A1-203ENST00000553612 CEACAM18A8MTB9 384 aa7.4□□□□□ -1.22
GTF2A1-203ENST00000553612 SYNGR3O43761 229 aa7.4□□□□□ -1.22
GTF2A1-203ENST00000553612 HTN1P15515 57 aa7.4□□□□□ -1.22
GTF2A1-203ENST00000553612 PRDM14Q9GZV8 571 aa7.4□□□□□ -1.22
GTF2A1-203ENST00000553612 SMKR1H3BMG3 65 aa7.4□□□□□ -1.23
GTF2A1-203ENST00000553612 ZNF32P17041 273 aa7.4□□□□□ -1.23
GTF2A1-203ENST00000553612 EEF1AKMT3Q96AZ1 226 aa7.4□□□□□ -1.23
GTF2A1-203ENST00000553612 FOXA2Q9Y261 457 aaPredicted RBP7.4□□□□□ -1.23
GTF2A1-203ENST00000553612 PDCD11Q14690 1871 aaKnown RBP7.4□□□□□ -1.23
GTF2A1-203ENST00000553612 TCRBV4S1A1TA0A5B7 111 aa7.4□□□□□ -1.23
GTF2A1-203ENST00000553612 IGKV1D-33P01593 117 aa7.4□□□□□ -1.23
GTF2A1-203ENST00000553612 IGKV1-33P01594 117 aa7.4□□□□□ -1.23
GTF2A1-203ENST00000553612 SLC25A53Q5H9E4 307 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 TMEM42Q69YG0 159 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 ZNF493Q6ZR52 646 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 FGF22Q9HCT0 170 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 IGKV1D-13A0A0B4J2D9 117 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 TM4SF5O14894 197 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 UQCRQO14949 82 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 DNAL4O96015 105 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 IGKV1-13P0DP09 117 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 IGFBP7Q16270 282 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 V9GYV3 84 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 FANCMQ8IYD8 2048 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 IGKV3D-20A0A0C4DH25 116 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 MOB3BQ86TA1 216 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 Q8TCH9 128 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 TANC1Q9C0D5 1861 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 A0A1W2PPC4 97 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 VMA21Q3ZAQ7 101 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 PLXDC1Q8IUK5 500 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 THAP10Q9P2Z0 257 aaPredicted RBP7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 HEATR5BQ9P2D3 2071 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 D6R8Y8 96 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 FGF11Q92914 225 aa7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 MRPS17Q9Y2R5 130 aaKnown RBP7.39□□□□□ -1.23
GTF2A1-203ENST00000553612 SAA2-SAA4A0A096LPE2 208 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 IGKV1D-43A0A0B4J1Z2 117 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 Q71RC1 249 aaPredicted RBP7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 Q8N976 141 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 COX6A1P12074 109 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 UTF1Q5T230 341 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 LYPD6Q86Y78 171 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 ZNF625Q96I27 306 aaPredicted RBP7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 PRO0628Q9UI54 55 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 MALP21145 153 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 FAM231DQ6ZW35 169 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 SFTPA2Q8IWL1 248 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 SFTPA1Q8IWL2 248 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 SHISA5Q8N114 240 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 C16orf92Q96LL3 132 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 CHCHD2Q9Y6H1 151 aaPredicted RBP7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 PHIPQ8WWQ0 1821 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 PTPRDP23468 1912 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 CISD3P0C7P0 127 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 FGF6P10767 208 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 ERCC8Q13216 396 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 COPS9Q8WXC6 57 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 DUSP14O95147 198 aaKnown RBP7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 PYYP10082 97 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 HOXA4Q00056 320 aaPredicted RBP7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 ZNF645Q8N7E2 425 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 TMEM74BQ9NUR3 256 aa7.38□□□□□ -1.23
GTF2A1-203ENST00000553612 SVILO95425 2214 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 IGKV3D-7A0A0C4DH55 119 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 KNCNA6PVL3 124 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 DPTQ07507 201 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 TMEM78Q5T7P6 136 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 SLC25A10Q9UBX3 287 aaPredicted RBP7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 ARAP2Q8WZ64 1704 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 A0A1B0GUT8 65 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 C9orf40Q8IXQ3 194 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 IFI27L2Q9H2X8 130 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 TJP1Q07157 1748 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 SHISA9B4DS77 424 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 PEX7O00628 323 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 ZFP2Q6ZN57 461 aa7.37□□□□□ -1.23
GTF2A1-203ENST00000553612 LILRA5A6NI73 299 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms