RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 TM4SF5O14894 197 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 COX7A2P2O60397 106 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 TOMM40O96008 361 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 IGHV1-46P01743 117 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 CCL3L1P16619 93 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 PCP4P48539 62 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 UBE2G1P62253 170 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 ERHP84090 104 aaKnown RBP4.36□□□□□ -1.71
LIMA1-212ENST00000552491 UBE2V1Q13404 147 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 ZNF788Q6ZQV5 615 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 ZNF833PQ6ZTB9 187 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 ATP5L2Q7Z4Y8 100 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 OR1L4Q8NGR5 311 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 OSR1Q8TAX0 266 aaPredicted RBP4.36□□□□□ -1.71
LIMA1-212ENST00000552491 GTSF1Q8WW33 167 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 SARAFQ96BY9 339 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 RITA1Q96K30 269 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 HARBI1Q96MB7 349 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 TPSG1Q9NRR2 321 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 RNF7Q9UBF6 113 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 PROCRQ9UNN8 238 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 COX11Q9Y6N1 276 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 EP300Q09472 2414 aaPredicted RBP4.36□□□□□ -1.71
LIMA1-212ENST00000552491 TACC2O95359 2948 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 IGLC7A0M8Q6 106 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 NKX6-3A6NJ46 265 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 C22orf46C9J442 243 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 H3BTX0 84 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 MOSP00540 346 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 GLRXP35754 106 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 FOXA3P55318 350 aaPredicted RBP4.36□□□□□ -1.71
LIMA1-212ENST00000552491 RBX1P62877 108 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 FAM162BQ5T6X4 162 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 C10orf113Q5VZT2 155 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 LEMD1Q68G75 181 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 SSX8Q7RTT4 187 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 ZCCHC24Q8N2G6 241 aaKnown RBP4.36□□□□□ -1.71
LIMA1-212ENST00000552491 MUC15Q8N387 334 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 ZNF738Q8NE65 137 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 OR2D3Q8NGH3 330 aa4.36□□□□□ -1.71
LIMA1-212ENST00000552491 MCRIP2Q9BUT9 160 aaKnown RBP4.36□□□□□ -1.71
LIMA1-212ENST00000552491 TCRBV4S1A1TA0A5B7 111 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 hDV102S1A0JD36 115 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 PRB4P10163 310 aaPredicted RBP4.35□□□□□ -1.71
LIMA1-212ENST00000552491 BPIFB3P59826 476 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 TNFAIP6P98066 277 aaPredicted RBP4.35□□□□□ -1.71
LIMA1-212ENST00000552491 MRGPRG-AS1Q2M3A8 158 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 LINC00305Q7Z4B0 112 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 OR5AN1Q8NGI8 311 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 ZNF596Q8TC21 504 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 BLNKQ8WV28 456 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 SMIM12Q96EX1 92 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 MLST8Q9BVC4 326 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 ZNF430Q9H8G1 570 aaPredicted RBP4.35□□□□□ -1.71
LIMA1-212ENST00000552491 EPDR1Q9UM22 224 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 RPH3ALQ9UNE2 315 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 ATMQ13315 3056 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 MALRD1Q5VYJ5 2156 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 CACNA1HO95180 2353 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 IGHV1-69-2A0A0G2JMI3 117 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 PGPA6NDG6 321 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 OVOL3O00110 214 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 CRXO43186 299 aaPredicted RBP4.35□□□□□ -1.71
LIMA1-212ENST00000552491 IGLV2-23P01705 113 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 APOA2P02652 100 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 CA7P43166 264 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 ZNF138P52744 262 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 FOXE3Q13461 319 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 TMEM177Q53S58 311 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 THAP8Q8NA92 274 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 STXBP6Q8NFX7 210 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 TMEM70Q9BUB7 260 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 C1RLQ9NZP8 487 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 KLF12Q9Y4X4 402 aa4.35□□□□□ -1.71
LIMA1-212ENST00000552491 IGHV3-21A0A0B4J1V1 117 aa4.34□□□□□ -1.71
LIMA1-212ENST00000552491 IGHV1-24A0A0C4DH33 117 aa4.34□□□□□ -1.71
LIMA1-212ENST00000552491 A0A1W2PPI3 338 aa4.34□□□□□ -1.71
LIMA1-212ENST00000552491 hADV38S2A0JD32 116 aa4.34□□□□□ -1.71
LIMA1-212ENST00000552491 K7EP13 123 aa4.34□□□□□ -1.71
LIMA1-212ENST00000552491 SLC25A5P05141 298 aaKnown RBP4.34□□□□□ -1.71
LIMA1-212ENST00000552491 SP9P0CG40 484 aa4.34□□□□□ -1.71
LIMA1-212ENST00000552491 APELAP0DMC3 54 aa4.34□□□□□ -1.71
LIMA1-212ENST00000552491 ORM2P19652 201 aa4.34□□□□□ -1.71
LIMA1-212ENST00000552491 TNFSF4P23510 183 aa4.34□□□□□ -1.71
LIMA1-212ENST00000552491 CEACAM8P31997 349 aaPredicted RBP4.34□□□□□ -1.71
LIMA1-212ENST00000552491 ZNF137PP52743 207 aa4.34□□□□□ -1.71
LIMA1-212ENST00000552491 SUB1P53999 127 aaKnown RBP eCLIP4.34□□□□□ -1.71
LIMA1-212ENST00000552491 HBBP68871 147 aa4.34□□□□□ -1.71
LIMA1-212ENST00000552491 CCL8P80075 99 aa4.34□□□□□ -1.71
LIMA1-212ENST00000552491 TIMM23BQ5SRD1 257 aa4.34□□□□□ -1.71
LIMA1-212ENST00000552491 IGFL2Q6UWQ7 119 aa4.34□□□□□ -1.71
LIMA1-212ENST00000552491 OR4A5Q8NH83 315 aa4.34□□□□□ -1.71
LIMA1-212ENST00000552491 TMEM167AQ8TBQ9 72 aa4.34□□□□□ -1.71
LIMA1-212ENST00000552491 FLYWCH2Q96CP2 140 aaKnown RBP4.34□□□□□ -1.71
LIMA1-212ENST00000552491 PGLYRP4Q96LB8 373 aa4.34□□□□□ -1.71
LIMA1-212ENST00000552491 GPR82Q96P67 336 aa4.34□□□□□ -1.71
LIMA1-212ENST00000552491 PRSS22Q9GZN4 317 aa4.34□□□□□ -1.71
LIMA1-212ENST00000552491 GSX1Q9H4S2 264 aaPredicted RBP4.34□□□□□ -1.71
LIMA1-212ENST00000552491 SVEP1Q4LDE5 3571 aa4.34□□□□□ -1.71
LIMA1-212ENST00000552491 TPRP12270 2363 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms