RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 SUPT4H1P63272 117 aaKnown RBP8.26□□□□□ -1.09
PRPF40B-212ENST00000551111 ZNF90Q03938 601 aa8.26□□□□□ -1.09
PRPF40B-212ENST00000551111 NMSQ5H8A3 153 aa8.26□□□□□ -1.09
PRPF40B-212ENST00000551111 SIGLEC15Q6ZMC9 328 aa8.26□□□□□ -1.09
PRPF40B-212ENST00000551111 LYZL2Q7Z4W2 148 aa8.26□□□□□ -1.09
PRPF40B-212ENST00000551111 OR51S1Q8NGJ8 323 aa8.26□□□□□ -1.09
PRPF40B-212ENST00000551111 NRN1Q9NPD7 142 aa8.26□□□□□ -1.09
PRPF40B-212ENST00000551111 IGHV3OR16-12A0A075B7B8 117 aa8.25□□□□□ -1.09
PRPF40B-212ENST00000551111 F6UB75 175 aa8.25□□□□□ -1.09
PRPF40B-212ENST00000551111 B3GALNT1O75752 331 aa8.25□□□□□ -1.09
PRPF40B-212ENST00000551111 AMBPP02760 352 aa8.25□□□□□ -1.09
PRPF40B-212ENST00000551111 SULT1A3P0DMM9 295 aa8.25□□□□□ -1.09
PRPF40B-212ENST00000551111 SULT1A4P0DMN0 295 aa8.25□□□□□ -1.09
PRPF40B-212ENST00000551111 HLA-DRB4P13762 266 aa8.25□□□□□ -1.09
PRPF40B-212ENST00000551111 EMP1P54849 157 aa8.25□□□□□ -1.09
PRPF40B-212ENST00000551111 SMIM4Q8WVI0 70 aa8.25□□□□□ -1.09
PRPF40B-212ENST00000551111 AP3S1Q92572 193 aa8.25□□□□□ -1.09
PRPF40B-212ENST00000551111 RBKSQ9H477 322 aa8.25□□□□□ -1.09
PRPF40B-212ENST00000551111 HLA-DRB4X5D2U9 266 aa8.25□□□□□ -1.09
PRPF40B-212ENST00000551111 ZNF705FA8MVS1 300 aaPredicted RBP8.24□□□□□ -1.09
PRPF40B-212ENST00000551111 DISC1C4P0D8 188 aa8.24□□□□□ -1.09
PRPF40B-212ENST00000551111 SOCS3O14543 225 aa8.24□□□□□ -1.09
PRPF40B-212ENST00000551111 IFNA10P01566 189 aa8.24□□□□□ -1.09
PRPF40B-212ENST00000551111 ZNF705DP0CH99 300 aaPredicted RBP8.24□□□□□ -1.09
PRPF40B-212ENST00000551111 ZNF705BP0CI00 300 aaPredicted RBP8.24□□□□□ -1.09
PRPF40B-212ENST00000551111 AKAIN1P0CW23 69 aa8.24□□□□□ -1.09
PRPF40B-212ENST00000551111 AP2S1P53680 142 aaPredicted RBP8.24□□□□□ -1.09
PRPF40B-212ENST00000551111 SNRPD3P62318 126 aaKnown RBP8.24□□□□□ -1.09
PRPF40B-212ENST00000551111 GAMTQ14353 236 aa8.24□□□□□ -1.09
PRPF40B-212ENST00000551111 ZNF705AQ6ZN79 300 aaPredicted RBP8.24□□□□□ -1.09
PRPF40B-212ENST00000551111 POM121L12Q8N7R1 296 aa8.24□□□□□ -1.09
PRPF40B-212ENST00000551111 ZNF709Q8N972 641 aa8.24□□□□□ -1.09
PRPF40B-212ENST00000551111 RNF125Q96EQ8 232 aa8.24□□□□□ -1.09
PRPF40B-212ENST00000551111 C17orf77Q96MU5 243 aa8.24□□□□□ -1.09
PRPF40B-212ENST00000551111 LINC00052Q96N35 136 aa8.24□□□□□ -1.09
PRPF40B-212ENST00000551111 PBDC1Q9BVG4 233 aa8.24□□□□□ -1.09
PRPF40B-212ENST00000551111 KRTAP3-3Q9BYR6 98 aa8.24□□□□□ -1.09
PRPF40B-212ENST00000551111 KRTAP3-2Q9BYR7 98 aa8.24□□□□□ -1.09
PRPF40B-212ENST00000551111 SLC35B3Q9H1N7 401 aa8.24□□□□□ -1.09
PRPF40B-212ENST00000551111 HSPB7Q9UBY9 170 aa8.24□□□□□ -1.09
PRPF40B-212ENST00000551111 IGKV1OR2-108A0A075B7D4 117 aa8.23□□□□□ -1.09
PRPF40B-212ENST00000551111 ANKRD20A5PA0PJZ0 165 aa8.23□□□□□ -1.09
PRPF40B-212ENST00000551111 SCGB2A1O75556 95 aa8.23□□□□□ -1.09
PRPF40B-212ENST00000551111 PRM2P04554 102 aa8.23□□□□□ -1.09
PRPF40B-212ENST00000551111 NKX2-1P43699 371 aaPredicted RBP8.23□□□□□ -1.09
PRPF40B-212ENST00000551111 ALDH3B2P48448 385 aa8.23□□□□□ -1.09
PRPF40B-212ENST00000551111 EIF2B2P49770 351 aaKnown RBP8.23□□□□□ -1.09
PRPF40B-212ENST00000551111 SSBP1Q04837 148 aaKnown RBP8.23□□□□□ -1.09
PRPF40B-212ENST00000551111 OR2F1Q13607 317 aa8.23□□□□□ -1.09
PRPF40B-212ENST00000551111 KLF9Q13886 244 aaPredicted RBP8.23□□□□□ -1.09
PRPF40B-212ENST00000551111 SURF2Q15527 256 aaPredicted RBP8.23□□□□□ -1.09
PRPF40B-212ENST00000551111 CLVS1Q8IUQ0 354 aaPredicted RBP8.23□□□□□ -1.09
PRPF40B-212ENST00000551111 LGI3Q8N145 548 aa8.23□□□□□ -1.09
PRPF40B-212ENST00000551111 DTD1Q8TEA8 209 aa8.23□□□□□ -1.09
PRPF40B-212ENST00000551111 DIRAS2Q96HU8 199 aa8.23□□□□□ -1.09
PRPF40B-212ENST00000551111 C20orf173Q96LM9 149 aa8.23□□□□□ -1.09
PRPF40B-212ENST00000551111 ABCA13Q86UQ4 5058 aa8.22□□□□□ -1.09
PRPF40B-212ENST00000551111 IGLV2-18A0A075B6J9 118 aa8.22□□□□□ -1.09
PRPF40B-212ENST00000551111 AKR1C4P17516 323 aa8.22□□□□□ -1.09
PRPF40B-212ENST00000551111 IL18Q14116 193 aa8.22□□□□□ -1.09
PRPF40B-212ENST00000551111 SMCO1Q147U7 214 aa8.22□□□□□ -1.09
PRPF40B-212ENST00000551111 ETFRF1Q6IPR1 90 aa8.22□□□□□ -1.09
PRPF40B-212ENST00000551111 C1orf158Q8N1D5 194 aa8.22□□□□□ -1.09
PRPF40B-212ENST00000551111 NDUFAF3Q9BU61 184 aa8.22□□□□□ -1.09
PRPF40B-212ENST00000551111 C1QTNF4Q9BXJ3 329 aa8.22□□□□□ -1.09
PRPF40B-212ENST00000551111 SAV1Q9H4B6 383 aaPredicted RBP8.22□□□□□ -1.09
PRPF40B-212ENST00000551111 SEPSECSQ9HD40 501 aaKnown RBP8.22□□□□□ -1.09
PRPF40B-212ENST00000551111 DKK2Q9UBU2 259 aa8.22□□□□□ -1.09
PRPF40B-212ENST00000551111 U3KQ87 197 aa8.22□□□□□ -1.09
PRPF40B-212ENST00000551111 PRSS29PA6NIE9 313 aa8.21□□□□□ -1.1
PRPF40B-212ENST00000551111 CTDSPLO15194 276 aa8.21□□□□□ -1.1
PRPF40B-212ENST00000551111 IAPPP10997 89 aa8.21□□□□□ -1.1
PRPF40B-212ENST00000551111 CCR6P51684 374 aa8.21□□□□□ -1.1
PRPF40B-212ENST00000551111 LYZP61626 148 aa8.21□□□□□ -1.1
PRPF40B-212ENST00000551111 NUTF2P61970 127 aaKnown RBP8.21□□□□□ -1.1
PRPF40B-212ENST00000551111 MRPS10P82664 201 aaKnown RBP8.21□□□□□ -1.1
PRPF40B-212ENST00000551111 FAM222AQ5U5X8 452 aa8.21□□□□□ -1.1
PRPF40B-212ENST00000551111 TMEM182Q6ZP80 229 aaPredicted RBP8.21□□□□□ -1.1
PRPF40B-212ENST00000551111 LINC00336Q6ZUF6 198 aa8.21□□□□□ -1.1
PRPF40B-212ENST00000551111 OR4B1Q8NGF8 309 aa8.21□□□□□ -1.1
PRPF40B-212ENST00000551111 DYNC2LI1Q8TCX1 351 aa8.21□□□□□ -1.1
PRPF40B-212ENST00000551111 C15orf40Q8WUR7 153 aa8.21□□□□□ -1.1
PRPF40B-212ENST00000551111 IL22RA2Q969J5 263 aa8.21□□□□□ -1.1
PRPF40B-212ENST00000551111 NEU1Q99519 415 aa8.21□□□□□ -1.1
PRPF40B-212ENST00000551111 PRRT1Q99946 306 aa8.21□□□□□ -1.1
PRPF40B-212ENST00000551111 SOSTQ9BQB4 213 aa8.21□□□□□ -1.1
PRPF40B-212ENST00000551111 KRTAP4-5Q9BYR2 181 aa8.21□□□□□ -1.1
PRPF40B-212ENST00000551111 A0A0B4J2A0 478 aa8.2□□□□□ -1.1
PRPF40B-212ENST00000551111 ZFP92A6NM28 416 aa8.2□□□□□ -1.1
PRPF40B-212ENST00000551111 GSTZ1O43708 216 aaPredicted RBP8.2□□□□□ -1.1
PRPF40B-212ENST00000551111 PITX3O75364 302 aa8.2□□□□□ -1.1
PRPF40B-212ENST00000551111 SPART-AS1P0CW21 52 aa8.2□□□□□ -1.1
PRPF40B-212ENST00000551111 P0DMU3 169 aa8.2□□□□□ -1.1
PRPF40B-212ENST00000551111 FAM231AP0DMU4 169 aa8.2□□□□□ -1.1
PRPF40B-212ENST00000551111 FAM231CP0DMU5 169 aa8.2□□□□□ -1.1
PRPF40B-212ENST00000551111 PRB4P10163 310 aaPredicted RBP8.2□□□□□ -1.1
PRPF40B-212ENST00000551111 HTN3P15516 51 aa8.2□□□□□ -1.1
PRPF40B-212ENST00000551111 GATA2P23769 480 aaPredicted RBP8.2□□□□□ -1.1
PRPF40B-212ENST00000551111 ZNF79Q15937 498 aa8.2□□□□□ -1.1
PRPF40B-212ENST00000551111 FAM78BQ5VT40 261 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms