RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 IAPPP10997 89 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 PCP4P48539 62 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 SULT1A1P50225 295 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 BCAP31P51572 246 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 CAV2P51636 162 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 HBG1P69891 147 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 HBG2P69892 147 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 BAXQ07812 192 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 KIAA0141Q14154 515 aaPredicted RBP4.42□□□□□ -1.7
SCAF11-213ENST00000550629 C15orf32Q32M92 178 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 SPANXN5Q5MJ07 72 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 SLC25A24Q6NUK1 477 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 ZNF343Q6P1L6 599 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 TMEM14EPQ6UXP3 125 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 AKAP14Q86UN6 197 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 STX12Q86Y82 276 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 TCTE3Q8IZS6 198 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 C3orf56Q8N813 242 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 ZNF491Q8N8L2 437 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 TMEM116Q8NCL8 245 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 OR2T35Q8NGX2 323 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 TMEM170AQ8WVE7 144 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 C4orf3Q8WVX3 66 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 DCUN1D4Q92564 292 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 TAF15Q92804 592 aaKnown RBP eCLIP4.42□□□□□ -1.7
SCAF11-213ENST00000550629 EEF1AKMT3Q96AZ1 226 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 PINX1Q96BK5 328 aaKnown RBP4.42□□□□□ -1.7
SCAF11-213ENST00000550629 MS4A10Q96PG2 267 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 OR4C12Q96R67 309 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 RNF126Q9BV68 326 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 SLC25A31Q9H0C2 315 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 PSENENQ9NZ42 101 aa4.42□□□□□ -1.7
SCAF11-213ENST00000550629 LSM5Q9Y4Y9 91 aaKnown RBP4.42□□□□□ -1.7
SCAF11-213ENST00000550629 TNCP24821 2201 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 STAB1Q9NY15 2570 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 PRSS46E5RG02 174 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 K7EIM0 57 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 CCNKO75909 580 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 OR2J3O76001 311 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 MT-CO2P00403 227 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 PRH1P02810 166 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 CD28P10747 220 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 S100A11P31949 105 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 NUP62P37198 522 aaPredicted RBP4.41□□□□□ -1.7
SCAF11-213ENST00000550629 OPRK1P41145 380 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 NPBWR1P48145 328 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 MFAP4P55083 255 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 KRTAP10-3P60369 221 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 LRRC37A5PQ49AS3 106 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 SPSB3Q6PJ21 355 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 C10orf99Q6UWK7 81 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 C12orf54Q6X4T0 127 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 C19orf35Q6ZS72 473 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 SLC16A13Q7RTY0 426 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 TMEM252Q8N6L7 170 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 PRR26Q8N8Z3 221 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 INO80EQ8NBZ0 244 aaPredicted RBP4.41□□□□□ -1.7
SCAF11-213ENST00000550629 OR10P1Q8NGE3 313 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 OR4X1Q8NH49 305 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 ZNF502Q8TBZ5 544 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 AQP10Q96PS8 301 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 CITED2Q99967 270 aaPredicted RBP4.41□□□□□ -1.7
SCAF11-213ENST00000550629 C21orf62Q9NYP8 219 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 OR5AC2Q9NZP5 309 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 MBD2Q9UBB5 411 aa4.41□□□□□ -1.7
SCAF11-213ENST00000550629 TRAV30A0A087WSZ9 112 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.4□□□□□ -1.71
SCAF11-213ENST00000550629 TRAV14DV4A0A0A6YYC5 116 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 A0A1B0GVG6 124 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 IGSF23A1L1A6 192 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 MFSD2BA6NFX1 497 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 HMSDA8MTL9 139 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 G3V3Q6 166 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 H3BP45 60 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 I3L521 148 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 FABP1P07148 127 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 METTL15P1P0C7V9 234 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 ZP3P21754 424 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 RPL12P30050 165 aaKnown RBP4.4□□□□□ -1.71
SCAF11-213ENST00000550629 DLK1P80370 383 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 EWSR1Q01844 656 aaKnown RBP eCLIP4.4□□□□□ -1.71
SCAF11-213ENST00000550629 ATP6V1FQ16864 119 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 VWC2Q2TAL6 325 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 ZNF546Q86UE3 836 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 KLHL30-AS1Q8NEE0 82 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 OR4F17Q8NGA8 305 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 BSCL2Q96G97 398 aaPredicted RBP4.4□□□□□ -1.71
SCAF11-213ENST00000550629 ST6GAL2Q96JF0 529 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 SLC35E1Q96K37 410 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 OR4F4Q96R69 305 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 FNDC4Q9H6D8 234 aaPredicted RBP4.4□□□□□ -1.71
SCAF11-213ENST00000550629 RANGRFQ9HD47 186 aaPredicted RBP4.4□□□□□ -1.71
SCAF11-213ENST00000550629 PEF1Q9UBV8 284 aaKnown RBP4.4□□□□□ -1.71
SCAF11-213ENST00000550629 TNFSF18Q9UNG2 199 aa4.4□□□□□ -1.71
SCAF11-213ENST00000550629 FXYD6-FXYD2A0A087WZ82 144 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 FAM24AA6NFZ4 105 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 PMS2P5A8MQ11 134 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 M0QZ24 198 aa4.39□□□□□ -1.71
SCAF11-213ENST00000550629 NUPL2O15504 423 aaKnown RBP4.39□□□□□ -1.71
SCAF11-213ENST00000550629 TGOLN2O43493 480 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms