RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 METTL26Q96S19 204 aa16.93■□□□□ 0.3
BRF1-216ENST00000550208 VSIRQ9H7M9 311 aa16.93■□□□□ 0.3
BRF1-216ENST00000550208 CST7O76096 145 aa16.92■□□□□ 0.3
BRF1-216ENST00000550208 RLN2P04090 185 aa16.92■□□□□ 0.3
BRF1-216ENST00000550208 CRYBB3P26998 211 aa16.92■□□□□ 0.3
BRF1-216ENST00000550208 USF2Q15853 346 aaPredicted RBP16.92■□□□□ 0.3
BRF1-216ENST00000550208 LAMTOR1Q6IAA8 161 aa16.92■□□□□ 0.3
BRF1-216ENST00000550208 TMEM144Q7Z5S9 345 aa16.92■□□□□ 0.3
BRF1-216ENST00000550208 OR51G1Q8NGK1 321 aa16.92■□□□□ 0.3
BRF1-216ENST00000550208 LYRM2Q9NU23 88 aaPredicted RBP16.92■□□□□ 0.3
BRF1-216ENST00000550208 OR5AC2Q9NZP5 309 aa16.92■□□□□ 0.3
BRF1-216ENST00000550208 IGSF23A1L1A6 192 aa16.91■□□□□ 0.3
BRF1-216ENST00000550208 CXCL3P19876 107 aa16.91■□□□□ 0.3
BRF1-216ENST00000550208 FCN2Q15485 313 aa16.91■□□□□ 0.3
BRF1-216ENST00000550208 TMEM182Q6ZP80 229 aaPredicted RBP16.91■□□□□ 0.3
BRF1-216ENST00000550208 TMEM252Q8N6L7 170 aa16.91■□□□□ 0.3
BRF1-216ENST00000550208 PPP1R1CQ8WVI7 109 aa16.91■□□□□ 0.3
BRF1-216ENST00000550208 MED28Q9H204 178 aa16.91■□□□□ 0.3
BRF1-216ENST00000550208 SMAD5-AS1Q9Y6J3 95 aa16.91■□□□□ 0.3
BRF1-216ENST00000550208 U3KQE9 123 aa16.91■□□□□ 0.3
BRF1-216ENST00000550208 FABP1P07148 127 aa16.9■□□□□ 0.3
BRF1-216ENST00000550208 CD7P09564 240 aa16.9■□□□□ 0.3
BRF1-216ENST00000550208 FAM90A2PQ658T7 463 aa16.9■□□□□ 0.3
BRF1-216ENST00000550208 RNF126Q9BV68 326 aa16.9■□□□□ 0.3
BRF1-216ENST00000550208 NPVFQ9HCQ7 196 aa16.9■□□□□ 0.3
BRF1-216ENST00000550208 A0A1W2PS18 150 aa16.89■□□□□ 0.29
BRF1-216ENST00000550208 FNDC10F2Z333 226 aa16.89■□□□□ 0.29
BRF1-216ENST00000550208 TSPAN4O14817 238 aa16.89■□□□□ 0.29
BRF1-216ENST00000550208 DFFBO76075 338 aa16.89■□□□□ 0.29
BRF1-216ENST00000550208 HNRNPCP07910 306 aaKnown RBP eCLIP16.89■□□□□ 0.29
BRF1-216ENST00000550208 GATA2P23769 480 aaPredicted RBP16.89■□□□□ 0.29
BRF1-216ENST00000550208 SLC38A11Q08AI6 406 aa16.89■□□□□ 0.29
BRF1-216ENST00000550208 TCF24Q7RTU0 167 aa16.89■□□□□ 0.29
BRF1-216ENST00000550208 GTSCR1Q86UQ5 136 aa16.89■□□□□ 0.29
BRF1-216ENST00000550208 TMEM217Q8N7C4 229 aa16.89■□□□□ 0.29
BRF1-216ENST00000550208 OR11H7Q8NGC8 314 aa16.89■□□□□ 0.29
BRF1-216ENST00000550208 RNF125Q96EQ8 232 aa16.89■□□□□ 0.29
BRF1-216ENST00000550208 NEURL2Q9BR09 285 aa16.89■□□□□ 0.29
BRF1-216ENST00000550208 GGACTQ9BVM4 153 aa16.89■□□□□ 0.29
BRF1-216ENST00000550208 PRKDCP78527 4128 aaKnown RBP16.89■□□□□ 0.29
BRF1-216ENST00000550208 E5RGE8 158 aa16.88■□□□□ 0.29
BRF1-216ENST00000550208 BMI1P35226 326 aa16.88■□□□□ 0.29
BRF1-216ENST00000550208 SULT1A1P50225 295 aa16.88■□□□□ 0.29
BRF1-216ENST00000550208 CD81P60033 236 aa16.88■□□□□ 0.29
BRF1-216ENST00000550208 PBDC1Q9BVG4 233 aa16.88■□□□□ 0.29
BRF1-216ENST00000550208 RABAC1Q9UI14 185 aa16.88■□□□□ 0.29
BRF1-216ENST00000550208 IGKV3-7A0A075B6H7 116 aa16.87■□□□□ 0.29
BRF1-216ENST00000550208 MPC2O95563 127 aa16.87■□□□□ 0.29
BRF1-216ENST00000550208 LYZP61626 148 aa16.87■□□□□ 0.29
BRF1-216ENST00000550208 CYP2G1PQ6ZSU1 146 aa16.87■□□□□ 0.29
BRF1-216ENST00000550208 SPAG8Q99932 426 aaPredicted RBP16.87■□□□□ 0.29
BRF1-216ENST00000550208 TMEM231Q9H6L2 316 aa16.87■□□□□ 0.29
BRF1-216ENST00000550208 P2RY1P47900 373 aa16.86■□□□□ 0.29
BRF1-216ENST00000550208 GBGT1Q8N5D6 347 aa16.86■□□□□ 0.29
BRF1-216ENST00000550208 NARS2Q96I59 477 aaKnown RBP16.86■□□□□ 0.29
BRF1-216ENST00000550208 S100A11P31949 105 aa16.85■□□□□ 0.29
BRF1-216ENST00000550208 TFPI2P48307 235 aa16.85■□□□□ 0.29
BRF1-216ENST00000550208 NHLH2Q02577 135 aa16.85■□□□□ 0.29
BRF1-216ENST00000550208 TEPPQ6URK8 271 aa16.85■□□□□ 0.29
BRF1-216ENST00000550208 C16orf54Q6UWD8 224 aa16.85■□□□□ 0.29
BRF1-216ENST00000550208 STX12Q86Y82 276 aa16.85■□□□□ 0.29
BRF1-216ENST00000550208 STPG3Q8N7X2 389 aa16.85■□□□□ 0.29
BRF1-216ENST00000550208 BPIFCQ8NFQ6 507 aa16.85■□□□□ 0.29
BRF1-216ENST00000550208 CFDP00746 253 aaPredicted RBP16.84■□□□□ 0.29
BRF1-216ENST00000550208 IGHV4-30-4P0DP06 118 aa16.84■□□□□ 0.29
BRF1-216ENST00000550208 EIF2B2P49770 351 aaKnown RBP16.84■□□□□ 0.29
BRF1-216ENST00000550208 RPL11P62913 178 aaKnown RBP16.84■□□□□ 0.29
BRF1-216ENST00000550208 DEFB125Q8N687 156 aa16.84■□□□□ 0.29
BRF1-216ENST00000550208 GRAMD2BQ96HH9 432 aa16.84■□□□□ 0.29
BRF1-216ENST00000550208 SLC25A31Q9H0C2 315 aa16.84■□□□□ 0.29
BRF1-216ENST00000550208 WFDC10AQ9H1F0 79 aa16.84■□□□□ 0.29
BRF1-216ENST00000550208 C19orf73Q9NVV2 129 aa16.84■□□□□ 0.29
BRF1-216ENST00000550208 BUB3O43684 328 aa16.83■□□□□ 0.28
BRF1-216ENST00000550208 CD5P06127 495 aa16.83■□□□□ 0.28
BRF1-216ENST00000550208 EWSR1Q01844 656 aaKnown RBP eCLIP16.83■□□□□ 0.283e-6■■■■□ 20.1
BRF1-216ENST00000550208 WFDC3Q8IUB2 231 aa16.83■□□□□ 0.28
BRF1-216ENST00000550208 OR11H12B2RN74 326 aa16.82■□□□□ 0.28
BRF1-216ENST00000550208 FRMD6-AS1P0C7T7 363 aa16.82■□□□□ 0.28
BRF1-216ENST00000550208 ORM2P19652 201 aa16.82■□□□□ 0.28
BRF1-216ENST00000550208 HBG1P69891 147 aa16.82■□□□□ 0.28
BRF1-216ENST00000550208 HBG2P69892 147 aa16.82■□□□□ 0.28
BRF1-216ENST00000550208 ATP6V1FQ16864 119 aa16.82■□□□□ 0.28
BRF1-216ENST00000550208 VWC2Q2TAL6 325 aa16.82■□□□□ 0.28
BRF1-216ENST00000550208 GLMPQ8WWB7 406 aa16.82■□□□□ 0.28
BRF1-216ENST00000550208 B9D2Q9BPU9 175 aa16.82■□□□□ 0.28
BRF1-216ENST00000550208 MS4A6AQ9H2W1 248 aa16.82■□□□□ 0.28
BRF1-216ENST00000550208 UQCC1Q9NVA1 299 aa16.82■□□□□ 0.28
BRF1-216ENST00000550208 MBD2Q9UBB5 411 aa16.82■□□□□ 0.28
BRF1-216ENST00000550208 UBQLN2Q9UHD9 624 aa16.82■□□□□ 0.28
BRF1-216ENST00000550208 OR4C46A6NHA9 309 aa16.81■□□□□ 0.28
BRF1-216ENST00000550208 A8MZ25 164 aa16.81■□□□□ 0.28
BRF1-216ENST00000550208 AGPAT2O15120 278 aa16.81■□□□□ 0.28
BRF1-216ENST00000550208 SELENOTP62341 195 aa16.81■□□□□ 0.28
BRF1-216ENST00000550208 PAFAH1B2P68402 229 aa16.81■□□□□ 0.28
BRF1-216ENST00000550208 MGST2Q99735 147 aa16.81■□□□□ 0.28
BRF1-216ENST00000550208 ASCL2Q99929 193 aa16.81■□□□□ 0.28
BRF1-216ENST00000550208 TMEM147Q9BVK8 224 aa16.81■□□□□ 0.28
BRF1-216ENST00000550208 TUBA4BQ9H853 241 aa16.81■□□□□ 0.28
BRF1-216ENST00000550208 SLC45A2Q9UMX9 530 aa16.81■□□□□ 0.28
BRF1-216ENST00000550208 WDR83OSQ9Y284 106 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms