RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 CRYGCP07315 174 aa12.86□□□□□ -0.35
CNOT2-209ENST00000548159 FAM87AP0C7U9 286 aa12.86□□□□□ -0.35
CNOT2-209ENST00000548159 PMCHP20382 165 aa12.86□□□□□ -0.35
CNOT2-209ENST00000548159 BRS3P32247 399 aa12.86□□□□□ -0.35
CNOT2-209ENST00000548159 FAM19A2Q8N3H0 131 aa12.86□□□□□ -0.35
CNOT2-209ENST00000548159 SIGLECL1Q8N7X8 197 aa12.86□□□□□ -0.35
CNOT2-209ENST00000548159 LINC01560Q8TB33 94 aa12.86□□□□□ -0.35
CNOT2-209ENST00000548159 MBD6Q96DN6 1003 aa12.86□□□□□ -0.35
CNOT2-209ENST00000548159 PGPA6NDG6 321 aa12.85□□□□□ -0.35
CNOT2-209ENST00000548159 VWC2LB2RUY7 222 aa12.85□□□□□ -0.35
CNOT2-209ENST00000548159 IGLV1-47P01700 117 aa12.85□□□□□ -0.35
CNOT2-209ENST00000548159 RPL27AP46776 148 aaKnown RBP12.85□□□□□ -0.35
CNOT2-209ENST00000548159 KRTDAPP60985 99 aa12.85□□□□□ -0.35
CNOT2-209ENST00000548159 LBHQ53QV2 105 aaPredicted RBP12.85□□□□□ -0.35
CNOT2-209ENST00000548159 TEX43Q6ZNM6 134 aa12.85□□□□□ -0.35
CNOT2-209ENST00000548159 NUP35Q8NFH5 326 aa12.85□□□□□ -0.35
CNOT2-209ENST00000548159 IGFBPL1Q8WX77 278 aa12.85□□□□□ -0.35
CNOT2-209ENST00000548159 SIGLEC9Q9Y336 463 aa12.85□□□□□ -0.35
CNOT2-209ENST00000548159 HRNRQ86YZ3 2850 aaPredicted RBP12.85□□□□□ -0.35
CNOT2-209ENST00000548159 AMTP48728 403 aa12.85□□□□□ -0.35
CNOT2-209ENST00000548159 INSIG2Q9Y5U4 225 aa12.85□□□□□ -0.35
CNOT2-209ENST00000548159 APCSP02743 223 aa12.84□□□□□ -0.35
CNOT2-209ENST00000548159 SLC25A5P05141 298 aaKnown RBP12.84□□□□□ -0.35
CNOT2-209ENST00000548159 CRYGBP07316 175 aa12.84□□□□□ -0.35
CNOT2-209ENST00000548159 COX7A1P24310 79 aa12.84□□□□□ -0.35
CNOT2-209ENST00000548159 APOBEC3AP31941 199 aaPredicted RBP12.84□□□□□ -0.35
CNOT2-209ENST00000548159 TBR1Q16650 682 aa12.84□□□□□ -0.35
CNOT2-209ENST00000548159 LINC00322Q6ZN03 302 aaPredicted RBP12.84□□□□□ -0.35
CNOT2-209ENST00000548159 SPACA3Q8IXA5 215 aa12.84□□□□□ -0.35
CNOT2-209ENST00000548159 Q8N976 141 aa12.84□□□□□ -0.35
CNOT2-209ENST00000548159 TEX45Q8NA69 505 aa12.84□□□□□ -0.35
CNOT2-209ENST00000548159 NRN1Q9NPD7 142 aa12.84□□□□□ -0.35
CNOT2-209ENST00000548159 ZNF331Q9NQX6 463 aaPredicted RBP12.84□□□□□ -0.35
CNOT2-209ENST00000548159 RALYQ9UKM9 306 aaKnown RBP12.84□□□□□ -0.35
CNOT2-209ENST00000548159 EPDR1Q9UM22 224 aa12.84□□□□□ -0.35
CNOT2-209ENST00000548159 IGHV1-3A0A0C4DH29 117 aa12.84□□□□□ -0.35
CNOT2-209ENST00000548159 HLA-DQA1P01909 254 aa12.84□□□□□ -0.35
CNOT2-209ENST00000548159 NBEAP1P0C6P0 100 aa12.84□□□□□ -0.35
CNOT2-209ENST00000548159 GRNP28799 593 aaKnown RBP12.84□□□□□ -0.35
CNOT2-209ENST00000548159 RPL19P84098 196 aaKnown RBP12.84□□□□□ -0.35
CNOT2-209ENST00000548159 OR10J3Q5JRS4 329 aa12.84□□□□□ -0.35
CNOT2-209ENST00000548159 ZNF705AQ6ZN79 300 aaPredicted RBP12.84□□□□□ -0.35
CNOT2-209ENST00000548159 SSBP4Q9BWG4 385 aaPredicted RBP12.84□□□□□ -0.35
CNOT2-209ENST00000548159 FBXL15Q9H469 300 aa12.84□□□□□ -0.35
CNOT2-209ENST00000548159 C7orf69Q9H7B7 122 aa12.84□□□□□ -0.35
CNOT2-209ENST00000548159 ATRXP46100 2492 aa12.83□□□□□ -0.36
CNOT2-209ENST00000548159 PRB4P10163 310 aaPredicted RBP12.83□□□□□ -0.36
CNOT2-209ENST00000548159 GPR6P46095 362 aaPredicted RBP12.83□□□□□ -0.36
CNOT2-209ENST00000548159 TMEM116Q8NCL8 245 aa12.83□□□□□ -0.36
CNOT2-209ENST00000548159 PERPQ96FX8 193 aa12.83□□□□□ -0.36
CNOT2-209ENST00000548159 TMEM68Q96MH6 324 aa12.83□□□□□ -0.36
CNOT2-209ENST00000548159 NGBQ9NPG2 151 aa12.83□□□□□ -0.36
CNOT2-209ENST00000548159 BUB1B-PAK6H3BSN5 160 aa12.83□□□□□ -0.36
CNOT2-209ENST00000548159 PPP1R27Q86WC6 154 aa12.83□□□□□ -0.36
CNOT2-209ENST00000548159 NEU1Q99519 415 aa12.83□□□□□ -0.36
CNOT2-209ENST00000548159 IGF2RP11717 2491 aa12.82□□□□□ -0.36
CNOT2-209ENST00000548159 HIGD1CA8MV81 97 aa12.82□□□□□ -0.36
CNOT2-209ENST00000548159 LY6HO94772 140 aa12.82□□□□□ -0.36
CNOT2-209ENST00000548159 CAMPP49913 170 aa12.82□□□□□ -0.36
CNOT2-209ENST00000548159 UBE2G1P62253 170 aa12.82□□□□□ -0.36
CNOT2-209ENST00000548159 TMEM183BQ1AE95 376 aa12.82□□□□□ -0.36
CNOT2-209ENST00000548159 LDLRAD2Q5SZI1 272 aa12.82□□□□□ -0.36
CNOT2-209ENST00000548159 PVRIGQ6DKI7 326 aa12.82□□□□□ -0.36
CNOT2-209ENST00000548159 FAM231DQ6ZW35 169 aa12.82□□□□□ -0.36
CNOT2-209ENST00000548159 KCNS1Q96KK3 526 aa12.82□□□□□ -0.36
CNOT2-209ENST00000548159 TEX22C9J3V5 150 aa12.82□□□□□ -0.36
CNOT2-209ENST00000548159 NUTF2P61970 127 aaKnown RBP12.82□□□□□ -0.36
CNOT2-209ENST00000548159 Q71RC1 249 aaPredicted RBP12.82□□□□□ -0.36
CNOT2-209ENST00000548159 C18orf32Q8TCD1 76 aa12.82□□□□□ -0.36
CNOT2-209ENST00000548159 TRGV9Q99603 122 aa12.82□□□□□ -0.36
CNOT2-209ENST00000548159 HYPMO75409 117 aa12.81□□□□□ -0.36
CNOT2-209ENST00000548159 CD3EP07766 207 aa12.81□□□□□ -0.36
CNOT2-209ENST00000548159 RAB4AP20338 218 aa12.81□□□□□ -0.36
CNOT2-209ENST00000548159 ETFRF1Q6IPR1 90 aa12.81□□□□□ -0.36
CNOT2-209ENST00000548159 TSKUQ8WUA8 353 aa12.81□□□□□ -0.36
CNOT2-209ENST00000548159 GRAMD2BQ96HH9 432 aa12.81□□□□□ -0.36
CNOT2-209ENST00000548159 B9A039 149 aa12.81□□□□□ -0.36
CNOT2-209ENST00000548159 M0R143 59 aa12.81□□□□□ -0.36
CNOT2-209ENST00000548159 SIAH2O43255 324 aa12.81□□□□□ -0.36
CNOT2-209ENST00000548159 GP9P14770 177 aa12.81□□□□□ -0.36
CNOT2-209ENST00000548159 SSTP61278 116 aa12.81□□□□□ -0.36
CNOT2-209ENST00000548159 FOXC1Q12948 553 aa12.81□□□□□ -0.36
CNOT2-209ENST00000548159 COX19Q49B96 90 aa12.81□□□□□ -0.36
CNOT2-209ENST00000548159 TCF24Q7RTU0 167 aa12.81□□□□□ -0.36
CNOT2-209ENST00000548159 NIT1Q86X76 327 aa12.81□□□□□ -0.36
CNOT2-209ENST00000548159 VAMP8Q9BV40 100 aa12.81□□□□□ -0.36
CNOT2-209ENST00000548159 DIRC3C9JPN6 131 aa12.8□□□□□ -0.36
CNOT2-209ENST00000548159 ZNF324O75467 553 aaPredicted RBP12.8□□□□□ -0.36
CNOT2-209ENST00000548159 PSG1P11464 419 aa12.8□□□□□ -0.36
CNOT2-209ENST00000548159 NTF3P20783 257 aa12.8□□□□□ -0.36
CNOT2-209ENST00000548159 PRRX1P54821 245 aa12.8□□□□□ -0.36
CNOT2-209ENST00000548159 CASP6P55212 293 aa12.8□□□□□ -0.36
CNOT2-209ENST00000548159 C20orf144Q9BQM9 153 aa12.8□□□□□ -0.36
CNOT2-209ENST00000548159 CLEC7AQ9BXN2 247 aa12.8□□□□□ -0.36
CNOT2-209ENST00000548159 ZNF586Q9NXT0 402 aa12.8□□□□□ -0.36
CNOT2-209ENST00000548159 F11RQ9Y624 299 aaKnown RBP12.8□□□□□ -0.36
CNOT2-209ENST00000548159 MED13LQ71F56 2210 aa12.8□□□□□ -0.36
CNOT2-209ENST00000548159 TRAV8-1A0A0A6YYK1 113 aa12.8□□□□□ -0.36
CNOT2-209ENST00000548159 PPIAL4CA0A0B4J2A2 164 aa12.8□□□□□ -0.36
CNOT2-209ENST00000548159 TOX4O94842 621 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms