RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 IGHV3OR15-7A0A075B7D8 119 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 C19orf71A6NCJ1 209 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 C2orf70A6NJV1 201 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 SRRM4A7MD48 611 aaKnown RBP5.2□□□□□ -1.58
SNHG1-225ENST00000545920 HIGD1CA8MV81 97 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 K7EQM0 130 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 M0R1B8 84 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 SPRY3O43610 288 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 P01737 135 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 SLC25A5P05141 298 aaKnown RBP5.2□□□□□ -1.58
SNHG1-225ENST00000545920 CEACAM8P31997 349 aaPredicted RBP5.2□□□□□ -1.58
SNHG1-225ENST00000545920 SLAQ13239 276 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 UBE2V1Q13404 147 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 FXYD3Q14802 87 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 TDRG1Q3Y452 100 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 LRRC10Q5BKY1 277 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 LEMD1Q68G75 181 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 C16orf54Q6UWD8 224 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 DHRS13Q6UX07 377 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 TMEM108Q6UXF1 575 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 FDCSPQ8NFU4 85 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 C8orf46Q8TAG6 207 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 ST6GALNAC6Q969X2 333 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 AJUBAQ96IF1 538 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 RCHY1Q96PM5 261 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 FZR1Q9UM11 496 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 R4GN57 208 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 PTPRBP23467 1997 aa5.2□□□□□ -1.58
SNHG1-225ENST00000545920 IGKV1D-37A0A075B6S9 117 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 TRAV30A0A087WSZ9 112 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 IGHV2-70DA0A0C4DH43 119 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 IGLC7A0M8Q6 106 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 F2Z2F3 143 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 TOX4O94842 621 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 IGKV1-16P04430 117 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 NPSP0C0P6 89 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 NBEAP1P0C6P0 100 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 NTF3P20783 257 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 CCL11P51671 97 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 PTTG1IPP53801 180 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 TCL1AP56279 114 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 GTF3C1Q12789 2109 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 RIGQ13278 110 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 TNXAQ16473 311 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 GAGE13Q4V321 117 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 SAPCD1Q5SSQ6 148 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 ZNF474Q6S9Z5 364 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-225ENST00000545920 SEM1Q6ZVN7 128 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 LINC00305Q7Z4B0 112 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 PIP4P1Q86T03 277 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 NPIPB3Q92617 1050 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 MAP1LC3CQ9BXW4 147 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 MRPL20Q9BYC9 149 aaKnown RBP5.19□□□□□ -1.58
SNHG1-225ENST00000545920 NPFFR1Q9GZQ6 430 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 NGBQ9NPG2 151 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 ASCL3Q9NQ33 180 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 FAM30AQ9NZY2 134 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 CNTRLQ7Z7A1 2325 aa5.19□□□□□ -1.58
SNHG1-225ENST00000545920 PPIAL4EA0A075B759 164 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 A0A087WWL8 130 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.18□□□□□ -1.58
SNHG1-225ENST00000545920 C17orf100A8MU93 164 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 PPIAL4DF5H284 164 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 SYS1-DBNDD2H3BUS1 97 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 CHEK1O14757 476 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 TNFRSF13BO14836 293 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-225ENST00000545920 NDUFB3O43676 98 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 LEPROTL1O95214 131 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 IGLV2-23P01705 113 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 TFF1P04155 84 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 TCRAP04437 139 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 PPIAL4FP0DN26 164 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 GP9P14770 177 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 RPL27AP46776 148 aaKnown RBP5.18□□□□□ -1.58
SNHG1-225ENST00000545920 CSN1S1P47710 185 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 GNG10P50151 68 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 RHOGP84095 191 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 RBPJQ06330 500 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 PDE6HQ13956 83 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 BATFQ16520 125 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 KIAA1644Q3SXP7 199 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 RNASEKQ6P5S7 137 aaKnown RBP5.18□□□□□ -1.58
SNHG1-225ENST00000545920 SLC25A34Q6PIV7 304 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 PATE2Q6UY27 113 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 Q6ZS92 163 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 STPG4Q8N801 248 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 TMEM75Q8N9X5 138 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 OR1N2Q8NGR9 330 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 CCL13Q99616 98 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 SCNM1Q9BWG6 230 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 FNDC4Q9H6D8 234 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-225ENST00000545920 HIGD1AQ9Y241 93 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 ZNF835Q9Y2P0 537 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 PPIAL4AQ9Y536 164 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 ESPL1Q14674 2120 aa5.18□□□□□ -1.58
SNHG1-225ENST00000545920 SDK1Q7Z5N4 2213 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 DOCK11Q5JSL3 2073 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 CEP290O15078 2479 aa5.17□□□□□ -1.58
SNHG1-225ENST00000545920 LOC102724200A0A096LPH7 203 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms