RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 HBG2P69892 147 aa12.92□□□□□ -0.34
RABGGTA-203ENST00000543002 LCN12Q6JVE5 192 aa12.92□□□□□ -0.34
RABGGTA-203ENST00000543002 BTNL8Q6UX41 500 aa12.92□□□□□ -0.34
RABGGTA-203ENST00000543002 OR51G1Q8NGK1 321 aa12.92□□□□□ -0.34
RABGGTA-203ENST00000543002 METTL26Q96S19 204 aa12.92□□□□□ -0.34
RABGGTA-203ENST00000543002 MBD2Q9UBB5 411 aa12.92□□□□□ -0.34
RABGGTA-203ENST00000543002 SORL1Q92673 2214 aa12.91□□□□□ -0.34
RABGGTA-203ENST00000543002 WI2-2373I1.2A0A1W2PRP0 233 aa12.91□□□□□ -0.34
RABGGTA-203ENST00000543002 IZUMO1RA6ND01 250 aa12.91□□□□□ -0.34
RABGGTA-203ENST00000543002 CHEK1O14757 476 aa12.91□□□□□ -0.34
RABGGTA-203ENST00000543002 NPPCP23582 126 aa12.91□□□□□ -0.34
RABGGTA-203ENST00000543002 CRYBB3P26998 211 aa12.91□□□□□ -0.34
RABGGTA-203ENST00000543002 RAP2BP61225 183 aa12.91□□□□□ -0.34
RABGGTA-203ENST00000543002 EWSR1Q01844 656 aaKnown RBP eCLIP12.91□□□□□ -0.34
RABGGTA-203ENST00000543002 RHPN1-AS1Q9BWJ2 59 aa12.91□□□□□ -0.34
RABGGTA-203ENST00000543002 IGHV3-49A0A0A0MS15 119 aa12.9□□□□□ -0.34
RABGGTA-203ENST00000543002 GP9P14770 177 aa12.9□□□□□ -0.34
RABGGTA-203ENST00000543002 BMI1P35226 326 aa12.9□□□□□ -0.34
RABGGTA-203ENST00000543002 NHLH2Q02577 135 aa12.9□□□□□ -0.34
RABGGTA-203ENST00000543002 BAXQ07812 192 aa12.9□□□□□ -0.34
RABGGTA-203ENST00000543002 OR2F1Q13607 317 aa12.9□□□□□ -0.34
RABGGTA-203ENST00000543002 USF2Q15853 346 aaPredicted RBP12.9□□□□□ -0.34
RABGGTA-203ENST00000543002 ATP6V1FQ16864 119 aa12.9□□□□□ -0.34
RABGGTA-203ENST00000543002 VWC2Q2TAL6 325 aa12.9□□□□□ -0.34
RABGGTA-203ENST00000543002 TEPPQ6URK8 271 aa12.9□□□□□ -0.34
RABGGTA-203ENST00000543002 LILRB2Q8N423 598 aa12.9□□□□□ -0.34
RABGGTA-203ENST00000543002 THAP6Q8TBB0 222 aa12.9□□□□□ -0.34
RABGGTA-203ENST00000543002 RNF125Q96EQ8 232 aa12.9□□□□□ -0.34
RABGGTA-203ENST00000543002 PRR25Q96S07 402 aa12.9□□□□□ -0.34
RABGGTA-203ENST00000543002 TMEM147Q9BVK8 224 aa12.9□□□□□ -0.34
RABGGTA-203ENST00000543002 VSIRQ9H7M9 311 aa12.9□□□□□ -0.34
RABGGTA-203ENST00000543002 UQCC1Q9NVA1 299 aa12.9□□□□□ -0.34
RABGGTA-203ENST00000543002 LSM4Q9Y4Z0 139 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-203ENST00000543002 SELENOKQ9Y6D0 94 aa12.9□□□□□ -0.34
RABGGTA-203ENST00000543002 TRAV25A0A0B4J276 109 aa12.89□□□□□ -0.35
RABGGTA-203ENST00000543002 CFDP00746 253 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-203ENST00000543002 APOHP02749 345 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-203ENST00000543002 HNRNPCP07910 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
RABGGTA-203ENST00000543002 FGL1Q08830 312 aa12.89□□□□□ -0.35
RABGGTA-203ENST00000543002 CYP2G1PQ6ZSU1 146 aa12.89□□□□□ -0.35
RABGGTA-203ENST00000543002 TMEM61Q8N0U2 210 aa12.89□□□□□ -0.35
RABGGTA-203ENST00000543002 U3KQE9 123 aa12.89□□□□□ -0.35
RABGGTA-203ENST00000543002 IGHV3OR16-13A0A075B7E8 117 aa12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 IGHV3-74A0A0B4J1X5 117 aa12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 A0A1W2PS18 150 aa12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 ZNF785A8K8V0 405 aa12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 SELENOTP62341 195 aa12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 LAMTOR1Q6IAA8 161 aa12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 TMEM182Q6ZP80 229 aaPredicted RBP12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 BPIFCQ8NFQ6 507 aa12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 ST8SIA2Q92186 375 aa12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 NARS2Q96I59 477 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 RNF2Q99496 336 aa12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 PBDC1Q9BVG4 233 aa12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 TMEM231Q9H6L2 316 aa12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 RABAC1Q9UI14 185 aa12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 GATA2P23769 480 aaPredicted RBP12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 RPL12P30050 165 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 LYZP61626 148 aa12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 Q5BKY6 102 aa12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 Q6ZNX1 250 aa12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 RBPMS2Q6ZRY4 209 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 OR5C1Q8NGR4 320 aa12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 CHAC2Q8WUX2 184 aa12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 WDR83OSQ9Y284 106 aa12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 HSPB11Q9Y547 144 aa12.88□□□□□ -0.35
RABGGTA-203ENST00000543002 IGHV3-66A0A0C4DH42 116 aa12.87□□□□□ -0.35
RABGGTA-203ENST00000543002 K7EIL1 84 aa12.87□□□□□ -0.35
RABGGTA-203ENST00000543002 TSPAN4O14817 238 aa12.87□□□□□ -0.35
RABGGTA-203ENST00000543002 AGPAT2O15120 278 aa12.87□□□□□ -0.35
RABGGTA-203ENST00000543002 CD5P06127 495 aa12.87□□□□□ -0.35
RABGGTA-203ENST00000543002 EIF2B2P49770 351 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-203ENST00000543002 GUCA2BQ16661 112 aa12.87□□□□□ -0.35
RABGGTA-203ENST00000543002 FAM90A2PQ658T7 463 aa12.87□□□□□ -0.35
RABGGTA-203ENST00000543002 OR2T35Q8NGX2 323 aa12.87□□□□□ -0.35
RABGGTA-203ENST00000543002 MGST2Q99735 147 aa12.87□□□□□ -0.35
RABGGTA-203ENST00000543002 UBE2L5PA0A1B0GUS4 154 aa12.86□□□□□ -0.35
RABGGTA-203ENST00000543002 RAB31Q13636 194 aa12.86□□□□□ -0.35
RABGGTA-203ENST00000543002 TCF24Q7RTU0 167 aa12.86□□□□□ -0.35
RABGGTA-203ENST00000543002 ZNF546Q86UE3 836 aa12.86□□□□□ -0.35
RABGGTA-203ENST00000543002 GRAMD2BQ96HH9 432 aa12.86□□□□□ -0.35
RABGGTA-203ENST00000543002 SPAG8Q99932 426 aaPredicted RBP12.86□□□□□ -0.35
RABGGTA-203ENST00000543002 PFDN2Q9UHV9 154 aa12.86□□□□□ -0.35
RABGGTA-203ENST00000543002 SLC45A2Q9UMX9 530 aa12.86□□□□□ -0.35
RABGGTA-203ENST00000543002 DNAH3Q8TD57 4116 aa12.85□□□□□ -0.35
RABGGTA-203ENST00000543002 BUB3O43684 328 aa12.85□□□□□ -0.35
RABGGTA-203ENST00000543002 LINC00869P0C866 280 aa12.85□□□□□ -0.35
RABGGTA-203ENST00000543002 NUP62P37198 522 aaPredicted RBP12.85□□□□□ -0.35
RABGGTA-203ENST00000543002 CAMLGP49069 296 aa12.85□□□□□ -0.35
RABGGTA-203ENST00000543002 PLP1P60201 277 aa12.85□□□□□ -0.35
RABGGTA-203ENST00000543002 CLINT1Q14677 625 aa12.85□□□□□ -0.35
RABGGTA-203ENST00000543002 MPDU1O75352 247 aa12.84□□□□□ -0.35
RABGGTA-203ENST00000543002 DFFBO76075 338 aa12.84□□□□□ -0.35
RABGGTA-203ENST00000543002 ORM2P19652 201 aa12.84□□□□□ -0.35
RABGGTA-203ENST00000543002 FGF7P21781 194 aa12.84□□□□□ -0.35
RABGGTA-203ENST00000543002 C16orf54Q6UWD8 224 aa12.84□□□□□ -0.35
RABGGTA-203ENST00000543002 GTSCR1Q86UQ5 136 aa12.84□□□□□ -0.35
RABGGTA-203ENST00000543002 Q8N1Y9 231 aa12.84□□□□□ -0.35
RABGGTA-203ENST00000543002 STPG3Q8N7X2 389 aa12.84□□□□□ -0.35
RABGGTA-203ENST00000543002 MRAPQ8TCY5 172 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms