RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 TMEM231Q9H6L2 316 aa14.67□□□□□ -0.06
DDX55-207ENST00000540763 VSIRQ9H7M9 311 aa14.67□□□□□ -0.06
DDX55-207ENST00000540763 OR5AC2Q9NZP5 309 aa14.67□□□□□ -0.06
DDX55-207ENST00000540763 WI2-2373I1.2A0A1W2PRP0 233 aa14.66□□□□□ -0.06
DDX55-207ENST00000540763 IGSF23A1L1A6 192 aa14.66□□□□□ -0.06
DDX55-207ENST00000540763 CHEK1O14757 476 aa14.66□□□□□ -0.06
DDX55-207ENST00000540763 ZNF207O43670 478 aaKnown RBP14.66□□□□□ -0.06
DDX55-207ENST00000540763 IL4P05112 153 aa14.66□□□□□ -0.06
DDX55-207ENST00000540763 GIPP09681 153 aaPredicted RBP14.66□□□□□ -0.06
DDX55-207ENST00000540763 NPPCP23582 126 aa14.66□□□□□ -0.06
DDX55-207ENST00000540763 S100A11P31949 105 aa14.66□□□□□ -0.06
DDX55-207ENST00000540763 BAXQ07812 192 aa14.66□□□□□ -0.06
DDX55-207ENST00000540763 SLC38A11Q08AI6 406 aa14.66□□□□□ -0.06
DDX55-207ENST00000540763 WDR89Q96FK6 387 aaPredicted RBP14.66□□□□□ -0.06
DDX55-207ENST00000540763 A0A1W2PS18 150 aa14.65□□□□□ -0.06
DDX55-207ENST00000540763 SMCO3A2RU48 225 aa14.65□□□□□ -0.06
DDX55-207ENST00000540763 LYL1P12980 280 aa14.65□□□□□ -0.06
DDX55-207ENST00000540763 NUP62P37198 522 aaPredicted RBP14.65□□□□□ -0.06
DDX55-207ENST00000540763 ZNF90Q03938 601 aa14.65□□□□□ -0.06
DDX55-207ENST00000540763 VWC2Q2TAL6 325 aa14.65□□□□□ -0.06
DDX55-207ENST00000540763 TEPPQ6URK8 271 aa14.65□□□□□ -0.06
DDX55-207ENST00000540763 TMEM61Q8N0U2 210 aa14.65□□□□□ -0.06
DDX55-207ENST00000540763 RNF125Q96EQ8 232 aa14.65□□□□□ -0.06
DDX55-207ENST00000540763 NARS2Q96I59 477 aaKnown RBP14.65□□□□□ -0.06
DDX55-207ENST00000540763 RNF126Q9BV68 326 aa14.65□□□□□ -0.06
DDX55-207ENST00000540763 RHPN1-AS1Q9BWJ2 59 aa14.65□□□□□ -0.06
DDX55-207ENST00000540763 CST7O76096 145 aa14.64□□□□□ -0.07
DDX55-207ENST00000540763 HNRNPCP07910 306 aaKnown RBP eCLIP14.64□□□□□ -0.07
DDX55-207ENST00000540763 SELENOTP62341 195 aa14.64□□□□□ -0.07
DDX55-207ENST00000540763 FGL1Q08830 312 aa14.64□□□□□ -0.07
DDX55-207ENST00000540763 ATP6V1FQ16864 119 aa14.64□□□□□ -0.07
DDX55-207ENST00000540763 LAMTOR1Q6IAA8 161 aa14.64□□□□□ -0.07
DDX55-207ENST00000540763 LILRB2Q8N423 598 aa14.64□□□□□ -0.07
DDX55-207ENST00000540763 LSM4Q9Y4Z0 139 aaKnown RBP14.64□□□□□ -0.07
DDX55-207ENST00000540763 U3KQE9 123 aa14.64□□□□□ -0.07
DDX55-207ENST00000540763 IZUMO1RA6ND01 250 aa14.63□□□□□ -0.07
DDX55-207ENST00000540763 K7EIL1 84 aa14.63□□□□□ -0.07
DDX55-207ENST00000540763 TSPAN4O14817 238 aa14.63□□□□□ -0.07
DDX55-207ENST00000540763 PRB2P02812 416 aaPredicted RBP14.63□□□□□ -0.07
DDX55-207ENST00000540763 RAP2BP61225 183 aa14.63□□□□□ -0.07
DDX55-207ENST00000540763 EWSR1Q01844 656 aaKnown RBP eCLIP14.63□□□□□ -0.07
DDX55-207ENST00000540763 USF2Q15853 346 aaPredicted RBP14.63□□□□□ -0.07
DDX55-207ENST00000540763 RBPMS2Q6ZRY4 209 aaKnown RBP14.63□□□□□ -0.07
DDX55-207ENST00000540763 TMEM217Q8N7C4 229 aa14.63□□□□□ -0.07
DDX55-207ENST00000540763 BPIFCQ8NFQ6 507 aa14.63□□□□□ -0.07
DDX55-207ENST00000540763 PRR25Q96S07 402 aa14.63□□□□□ -0.07
DDX55-207ENST00000540763 SPAG8Q99932 426 aaPredicted RBP14.63□□□□□ -0.07
DDX55-207ENST00000540763 TMEM147Q9BVK8 224 aa14.63□□□□□ -0.07
DDX55-207ENST00000540763 UQCC1Q9NVA1 299 aa14.63□□□□□ -0.07
DDX55-207ENST00000540763 PFDN2Q9UHV9 154 aa14.63□□□□□ -0.07
DDX55-207ENST00000540763 RABAC1Q9UI14 185 aa14.63□□□□□ -0.07
DDX55-207ENST00000540763 ZNF785A8K8V0 405 aa14.62□□□□□ -0.07
DDX55-207ENST00000540763 CYP2G1PQ6ZSU1 146 aa14.62□□□□□ -0.07
DDX55-207ENST00000540763 THAP6Q8TBB0 222 aa14.62□□□□□ -0.07
DDX55-207ENST00000540763 GRAMD2BQ96HH9 432 aa14.62□□□□□ -0.07
DDX55-207ENST00000540763 MBD2Q9UBB5 411 aa14.62□□□□□ -0.07
DDX55-207ENST00000540763 SLC45A2Q9UMX9 530 aa14.62□□□□□ -0.07
DDX55-207ENST00000540763 EIF2B2P49770 351 aaKnown RBP14.61□□□□□ -0.07
DDX55-207ENST00000540763 FAM90A2PQ658T7 463 aa14.61□□□□□ -0.07
DDX55-207ENST00000540763 GTSCR1Q86UQ5 136 aa14.61□□□□□ -0.07
DDX55-207ENST00000540763 ST8SIA2Q92186 375 aa14.61□□□□□ -0.07
DDX55-207ENST00000540763 RNF2Q99496 336 aa14.61□□□□□ -0.07
DDX55-207ENST00000540763 WDR83OSQ9Y284 106 aa14.61□□□□□ -0.07
DDX55-207ENST00000540763 APOHP02749 345 aaPredicted RBP14.6□□□□□ -0.07
DDX55-207ENST00000540763 S100A7P31151 101 aa14.6□□□□□ -0.07
DDX55-207ENST00000540763 PLP1P60201 277 aa14.6□□□□□ -0.07
DDX55-207ENST00000540763 OR2F1Q13607 317 aa14.6□□□□□ -0.07
DDX55-207ENST00000540763 ZNF546Q86UE3 836 aa14.6□□□□□ -0.07
DDX55-207ENST00000540763 MRAPQ8TCY5 172 aa14.6□□□□□ -0.07
DDX55-207ENST00000540763 IGHV3-49A0A0A0MS15 119 aa14.59□□□□□ -0.07
DDX55-207ENST00000540763 MPDU1O75352 247 aa14.59□□□□□ -0.07
DDX55-207ENST00000540763 RPL12P30050 165 aaKnown RBP14.59□□□□□ -0.07
DDX55-207ENST00000540763 LYZP61626 148 aa14.59□□□□□ -0.07
DDX55-207ENST00000540763 NHLH2Q02577 135 aa14.59□□□□□ -0.07
DDX55-207ENST00000540763 RAB31Q13636 194 aa14.59□□□□□ -0.07
DDX55-207ENST00000540763 GUCA2BQ16661 112 aa14.59□□□□□ -0.07
DDX55-207ENST00000540763 PXDC1Q5TGL8 231 aa14.59□□□□□ -0.07
DDX55-207ENST00000540763 OR5C1Q8NGR4 320 aa14.59□□□□□ -0.07
DDX55-207ENST00000540763 CHAC2Q8WUX2 184 aa14.59□□□□□ -0.07
DDX55-207ENST00000540763 PBDC1Q9BVG4 233 aa14.59□□□□□ -0.07
DDX55-207ENST00000540763 HSPB11Q9Y547 144 aa14.59□□□□□ -0.07
DDX55-207ENST00000540763 IGHV3OR16-13A0A075B7E8 117 aa14.58□□□□□ -0.08
DDX55-207ENST00000540763 IGHV3-74A0A0B4J1X5 117 aa14.58□□□□□ -0.08
DDX55-207ENST00000540763 TRAV2A0A0B4J234 112 aa14.58□□□□□ -0.08
DDX55-207ENST00000540763 AGPAT2O15120 278 aa14.58□□□□□ -0.08
DDX55-207ENST00000540763 BUB3O43684 328 aa14.58□□□□□ -0.08
DDX55-207ENST00000540763 C16orf54Q6UWD8 224 aa14.58□□□□□ -0.08
DDX55-207ENST00000540763 TCF24Q7RTU0 167 aa14.58□□□□□ -0.08
DDX55-207ENST00000540763 GLMPQ8WWB7 406 aa14.58□□□□□ -0.08
DDX55-207ENST00000540763 UBE2L5PA0A1B0GUS4 154 aa14.57□□□□□ -0.08
DDX55-207ENST00000540763 OR4C46A6NHA9 309 aa14.57□□□□□ -0.08
DDX55-207ENST00000540763 LINC00869P0C866 280 aa14.57□□□□□ -0.08
DDX55-207ENST00000540763 C1orf194Q5T5A4 169 aa14.57□□□□□ -0.08
DDX55-207ENST00000540763 S100A7AQ86SG5 101 aa14.57□□□□□ -0.08
DDX55-207ENST00000540763 Q8N1Y9 231 aa14.57□□□□□ -0.08
DDX55-207ENST00000540763 MGST2Q99735 147 aa14.57□□□□□ -0.08
DDX55-207ENST00000540763 FAM110AQ9BQ89 295 aa14.57□□□□□ -0.08
DDX55-207ENST00000540763 SMAD5-AS1Q9Y6J3 95 aa14.57□□□□□ -0.08
DDX55-207ENST00000540763 HELTA6NFD8 242 aa14.56□□□□□ -0.08
DDX55-207ENST00000540763 A8MZ25 164 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms