RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 ACTL10Q5JWF8 245 aa3.73□□□□□ -1.81
SNHG1-204ENST00000537068 PRSS54Q6PEW0 395 aa3.73□□□□□ -1.81
SNHG1-204ENST00000537068 SLC35G3Q8N808 338 aa3.73□□□□□ -1.81
SNHG1-204ENST00000537068 STXBP6Q8NFX7 210 aa3.73□□□□□ -1.81
SNHG1-204ENST00000537068 TMEM230Q96A57 120 aa3.73□□□□□ -1.81
SNHG1-204ENST00000537068 YIPF6Q96EC8 236 aa3.73□□□□□ -1.81
SNHG1-204ENST00000537068 DNAH6Q9C0G6 4158 aa3.73□□□□□ -1.81
SNHG1-204ENST00000537068 TMEM189A5PLL7 270 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 DIRC3C9JPN6 131 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 FAM90A26D6RGX4 464 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 M0R2N4 97 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 ATG12O94817 140 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 IFNA17P01571 189 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 SPART-AS1P0CW21 52 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 SLC25A4P12235 298 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 HLA-DRB4P13762 266 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 ELK1P19419 428 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 RCVRNP35243 200 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 OPRK1P41145 380 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 HTR2BP41595 481 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 NKX2-1P43699 371 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-204ENST00000537068 HOXA1P49639 335 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-204ENST00000537068 EIF2B2P49770 351 aaKnown RBP3.72□□□□□ -1.81
SNHG1-204ENST00000537068 PIGPP57054 158 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 SPCS3P61009 180 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 DHODHQ02127 395 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 NEDD8Q15843 81 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 USF2Q15853 346 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-204ENST00000537068 KRTAP19-4Q3LI73 84 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 TIGITQ495A1 244 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 PSMG4Q5JS54 123 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 ZNF767PQ75MW2 155 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 FAM219AQ8IW50 185 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 CENPSQ8N2Z9 138 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 ARRDC1Q8N5I2 433 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 ZNF709Q8N972 641 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 OR1S2Q8NGQ3 325 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 TERB2Q8NHR7 220 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 RNASEH2CQ8TDP1 164 aaKnown RBP3.72□□□□□ -1.81
SNHG1-204ENST00000537068 Q8WTZ3 238 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 GLYATL2Q8WU03 294 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 TMEM170AQ8WVE7 144 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 NARS2Q96I59 477 aaKnown RBP3.72□□□□□ -1.81
SNHG1-204ENST00000537068 NRN1Q9NPD7 142 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-204ENST00000537068 DKK2Q9UBU2 259 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 KLK11Q9UBX7 282 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 HLA-DRB4X5D2U9 266 aa3.72□□□□□ -1.81
SNHG1-204ENST00000537068 SMIM31A0A1B0GVY4 71 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 RPS10-NUDT3A0A1W2PQS6 291 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 A8MTW9 85 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 SOCS3O14543 225 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 SCGB2A1O75556 95 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 CDK2AP2O75956 126 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 ATP6V1G2O95670 118 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 TOMM40O96008 361 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 IFNA21P01568 189 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 TBPP20226 339 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 OR10J1P30954 320 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 RND2P52198 227 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 AKR1C2P52895 323 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 PAX9P55771 341 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 FAM3BP58499 235 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-204ENST00000537068 SNRPD3P62318 126 aaKnown RBP3.71□□□□□ -1.82
SNHG1-204ENST00000537068 ZNF79Q15937 498 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 SP6Q3SY56 376 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 GDF5OSQ5U4N7 250 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 SIGLEC15Q6ZMC9 328 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 C1orf158Q8N1D5 194 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 LHFPL5Q8TAF8 219 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 ZFAND1Q8TCF1 268 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 ABHD1Q96SE0 405 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 RTBDNQ9BSG5 229 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-204ENST00000537068 PDCD10Q9BUL8 212 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 TMEM222Q9H0R3 208 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 SAV1Q9H4B6 383 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-204ENST00000537068 Q9H521 79 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 XCL2Q9UBD3 114 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 COMMD3Q9UBI1 195 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 MTFP1Q9UDX5 166 aa3.71□□□□□ -1.82
SNHG1-204ENST00000537068 DYNC1H1Q14204 4646 aaKnown RBP3.71□□□□□ -1.82
SNHG1-204ENST00000537068 PKHD1P08F94 4074 aa3.7□□□□□ -1.82
SNHG1-204ENST00000537068 TRGV11A0A075B6L2 103 aa3.7□□□□□ -1.82
SNHG1-204ENST00000537068 TEX13DA0A0J9YY54 714 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-204ENST00000537068 TEX48A0A1B0GUV7 120 aa3.7□□□□□ -1.82
SNHG1-204ENST00000537068 KRTAP23-1A1A580 65 aa3.7□□□□□ -1.82
SNHG1-204ENST00000537068 TRIAP1O43715 76 aa3.7□□□□□ -1.82
SNHG1-204ENST00000537068 IFNA10P01566 189 aa3.7□□□□□ -1.82
SNHG1-204ENST00000537068 CD3DP04234 171 aa3.7□□□□□ -1.82
SNHG1-204ENST00000537068 IL4P05112 153 aa3.7□□□□□ -1.82
SNHG1-204ENST00000537068 RD3LP0DJH9 198 aa3.7□□□□□ -1.82
SNHG1-204ENST00000537068 PSG1P11464 419 aa3.7□□□□□ -1.82
SNHG1-204ENST00000537068 PGAM2P15259 253 aa3.7□□□□□ -1.82
SNHG1-204ENST00000537068 RORCP51449 518 aa3.7□□□□□ -1.82
SNHG1-204ENST00000537068 RNASE10Q5GAN6 216 aaKnown RBP3.7□□□□□ -1.82
SNHG1-204ENST00000537068 NMSQ5H8A3 153 aa3.7□□□□□ -1.82
SNHG1-204ENST00000537068 C1orf134Q5TEV5 83 aa3.7□□□□□ -1.82
SNHG1-204ENST00000537068 FAM222AQ5U5X8 452 aa3.7□□□□□ -1.82
SNHG1-204ENST00000537068 SPATA31B1PQ5VZV4 182 aa3.7□□□□□ -1.82
SNHG1-204ENST00000537068 ETFRF1Q6IPR1 90 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms