RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 TBC1D24Q9ULP9 559 aa14.25□□□□□ -0.13
TNFRSF1B-204ENST00000536782 ELOA3CA0A087WX78 387 aaPredicted RBP14.24□□□□□ -0.13
TNFRSF1B-204ENST00000536782 TRAV10A0A0B4J240 114 aa14.24□□□□□ -0.13
TNFRSF1B-204ENST00000536782 CRYM-AS1A6NIL9 109 aa14.24□□□□□ -0.13
TNFRSF1B-204ENST00000536782 IL4P05112 153 aa14.24□□□□□ -0.13
TNFRSF1B-204ENST00000536782 KLF9Q13886 244 aaPredicted RBP14.24□□□□□ -0.13
TNFRSF1B-204ENST00000536782 USF2Q15853 346 aaPredicted RBP14.24□□□□□ -0.13
TNFRSF1B-204ENST00000536782 ZNF79Q15937 498 aa14.24□□□□□ -0.13
TNFRSF1B-204ENST00000536782 SPANXN2Q5MJ10 180 aa14.24□□□□□ -0.13
TNFRSF1B-204ENST00000536782 NOXA1Q86UR1 476 aa14.24□□□□□ -0.13
TNFRSF1B-204ENST00000536782 CSNK1G2-AS1Q8NCQ2 148 aa14.24□□□□□ -0.13
TNFRSF1B-204ENST00000536782 MCUBQ9NWR8 336 aa14.24□□□□□ -0.13
TNFRSF1B-204ENST00000536782 TMEM56-RWDD3S4R434 201 aa14.24□□□□□ -0.13
TNFRSF1B-204ENST00000536782 NPY1RP25929 384 aa14.23□□□□□ -0.13
TNFRSF1B-204ENST00000536782 NUTF2P61970 127 aaKnown RBP14.23□□□□□ -0.13
TNFRSF1B-204ENST00000536782 SNRPD3P62318 126 aaKnown RBP14.23□□□□□ -0.13
TNFRSF1B-204ENST00000536782 Q6ZTC4 211 aa14.23□□□□□ -0.13
TNFRSF1B-204ENST00000536782 TOMM5Q8N4H5 51 aa14.23□□□□□ -0.13
TNFRSF1B-204ENST00000536782 TMEM170AQ8WVE7 144 aa14.23□□□□□ -0.13
TNFRSF1B-204ENST00000536782 NPIPB3Q92617 1050 aa14.23□□□□□ -0.13
TNFRSF1B-204ENST00000536782 FAM90A26D6RGX4 464 aa14.22□□□□□ -0.13
TNFRSF1B-204ENST00000536782 NXPH3O95157 252 aa14.22□□□□□ -0.13
TNFRSF1B-204ENST00000536782 TOMM40O96008 361 aa14.22□□□□□ -0.13
TNFRSF1B-204ENST00000536782 RD3LP0DJH9 198 aa14.22□□□□□ -0.13
TNFRSF1B-204ENST00000536782 ACY3Q96HD9 319 aa14.22□□□□□ -0.13
TNFRSF1B-204ENST00000536782 C1QTNF4Q9BXJ3 329 aa14.22□□□□□ -0.13
TNFRSF1B-204ENST00000536782 SEPSECSQ9HD40 501 aaKnown RBP14.22□□□□□ -0.13
TNFRSF1B-204ENST00000536782 NRN1Q9NPD7 142 aa14.22□□□□□ -0.13
TNFRSF1B-204ENST00000536782 IGHV4-4A0A075B6R2 117 aa14.21□□□□□ -0.13
TNFRSF1B-204ENST00000536782 BUB3O43684 328 aa14.21□□□□□ -0.13
TNFRSF1B-204ENST00000536782 SULT1A3P0DMM9 295 aa14.21□□□□□ -0.13
TNFRSF1B-204ENST00000536782 SULT1A4P0DMN0 295 aa14.21□□□□□ -0.13
TNFRSF1B-204ENST00000536782 NMSQ5H8A3 153 aa14.21□□□□□ -0.13
TNFRSF1B-204ENST00000536782 SIGLEC15Q6ZMC9 328 aa14.21□□□□□ -0.13
TNFRSF1B-204ENST00000536782 IL22RA2Q969J5 263 aa14.21□□□□□ -0.13
TNFRSF1B-204ENST00000536782 KCNIP3Q9Y2W7 256 aa14.21□□□□□ -0.13
TNFRSF1B-204ENST00000536782 FAT2Q9NYQ8 4349 aa14.21□□□□□ -0.13
TNFRSF1B-204ENST00000536782 IFNA10P01566 189 aa14.2□□□□□ -0.14
TNFRSF1B-204ENST00000536782 SRRQ9GZT4 340 aa14.2□□□□□ -0.14
TNFRSF1B-204ENST00000536782 U3KQ87 197 aa14.2□□□□□ -0.14
TNFRSF1B-204ENST00000536782 DNAH17Q9UFH2 4485 aa14.19□□□□□ -0.14
TNFRSF1B-204ENST00000536782 PSG1P11464 419 aa14.19□□□□□ -0.14
TNFRSF1B-204ENST00000536782 RNF126Q9BV68 326 aa14.19□□□□□ -0.14
TNFRSF1B-204ENST00000536782 XCL2Q9UBD3 114 aa14.19□□□□□ -0.14
TNFRSF1B-204ENST00000536782 CELA1Q9UNI1 258 aa14.19□□□□□ -0.14
TNFRSF1B-204ENST00000536782 DNAH2Q9P225 4427 aa14.18□□□□□ -0.14
TNFRSF1B-204ENST00000536782 H3BMM0 161 aa14.18□□□□□ -0.14
TNFRSF1B-204ENST00000536782 CCR6P51684 374 aa14.18□□□□□ -0.14
TNFRSF1B-204ENST00000536782 OR51G1Q8NGK1 321 aa14.18□□□□□ -0.14
TNFRSF1B-204ENST00000536782 PRR13Q9NZ81 148 aa14.18□□□□□ -0.14
TNFRSF1B-204ENST00000536782 PKHD1P08F94 4074 aa14.17□□□□□ -0.14
TNFRSF1B-204ENST00000536782 NUP62P37198 522 aaPredicted RBP14.17□□□□□ -0.14
TNFRSF1B-204ENST00000536782 C12orf74Q32Q52 190 aa14.17□□□□□ -0.14
TNFRSF1B-204ENST00000536782 LGI3Q8N145 548 aa14.17□□□□□ -0.14
TNFRSF1B-204ENST00000536782 DTD1Q8TEA8 209 aa14.17□□□□□ -0.14
TNFRSF1B-204ENST00000536782 RNF125Q96EQ8 232 aa14.17□□□□□ -0.14
TNFRSF1B-204ENST00000536782 SLC25A21Q9BQT8 299 aaPredicted RBP14.17□□□□□ -0.14
TNFRSF1B-204ENST00000536782 HSPB7Q9UBY9 170 aa14.17□□□□□ -0.14
TNFRSF1B-204ENST00000536782 PFDN2Q9UHV9 154 aa14.17□□□□□ -0.14
TNFRSF1B-204ENST00000536782 DEFB131BA0A096LNP1 70 aa14.16□□□□□ -0.14
TNFRSF1B-204ENST00000536782 A0A0B4J2A0 478 aa14.16□□□□□ -0.14
TNFRSF1B-204ENST00000536782 PIGBOS1A0A0B4J2F0 54 aa14.16□□□□□ -0.14
TNFRSF1B-204ENST00000536782 ANXA3P12429 323 aa14.16□□□□□ -0.14
TNFRSF1B-204ENST00000536782 HLA-DRB4P13762 266 aa14.16□□□□□ -0.14
TNFRSF1B-204ENST00000536782 NKX2-1P43699 371 aaPredicted RBP14.16□□□□□ -0.14
TNFRSF1B-204ENST00000536782 SMCO1Q147U7 214 aa14.16□□□□□ -0.14
TNFRSF1B-204ENST00000536782 ZNF767PQ75MW2 155 aa14.16□□□□□ -0.14
TNFRSF1B-204ENST00000536782 PBDC1Q9BVG4 233 aa14.16□□□□□ -0.14
TNFRSF1B-204ENST00000536782 RBKSQ9H477 322 aa14.16□□□□□ -0.14
TNFRSF1B-204ENST00000536782 SHPKQ9UHJ6 478 aa14.16□□□□□ -0.14
TNFRSF1B-204ENST00000536782 HLA-DRB4X5D2U9 266 aa14.16□□□□□ -0.14
TNFRSF1B-204ENST00000536782 AMBPP02760 352 aa14.15□□□□□ -0.14
TNFRSF1B-204ENST00000536782 AKR1C4P17516 323 aa14.15□□□□□ -0.14
TNFRSF1B-204ENST00000536782 ATP5IP56385 69 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF1B-204ENST00000536782 SRPXP78539 464 aa14.15□□□□□ -0.14
TNFRSF1B-204ENST00000536782 TRIQKQ629K1 86 aa14.15□□□□□ -0.14
TNFRSF1B-204ENST00000536782 OR8G2PQ6IF36 304 aa14.15□□□□□ -0.14
TNFRSF1B-204ENST00000536782 LYZL2Q7Z4W2 148 aa14.15□□□□□ -0.14
TNFRSF1B-204ENST00000536782 RYR1P21817 5038 aa14.15□□□□□ -0.14
TNFRSF1B-204ENST00000536782 ZFP92A6NM28 416 aa14.14□□□□□ -0.15
TNFRSF1B-204ENST00000536782 INPP1P49441 399 aa14.14□□□□□ -0.15
TNFRSF1B-204ENST00000536782 SUPT4H1P63272 117 aaKnown RBP14.14□□□□□ -0.15
TNFRSF1B-204ENST00000536782 NAP1L6A6NFF2 107 aa14.13□□□□□ -0.15
TNFRSF1B-204ENST00000536782 GPX4P36969 197 aaPredicted RBP14.13□□□□□ -0.15
TNFRSF1B-204ENST00000536782 ID1P41134 155 aa14.13□□□□□ -0.15
TNFRSF1B-204ENST00000536782 GAMTQ14353 236 aa14.13□□□□□ -0.15
TNFRSF1B-204ENST00000536782 TMEM128Q5BJH2 165 aa14.13□□□□□ -0.15
TNFRSF1B-204ENST00000536782 ZNF705AQ6ZN79 300 aaPredicted RBP14.13□□□□□ -0.15
TNFRSF1B-204ENST00000536782 OR1S1Q8NH92 325 aa14.13□□□□□ -0.15
TNFRSF1B-204ENST00000536782 SLC35E1Q96K37 410 aa14.13□□□□□ -0.15
TNFRSF1B-204ENST00000536782 NEU1Q99519 415 aa14.13□□□□□ -0.15
TNFRSF1B-204ENST00000536782 NDUFAF3Q9BU61 184 aa14.13□□□□□ -0.15
TNFRSF1B-204ENST00000536782 FABP1P07148 127 aa14.12□□□□□ -0.15
TNFRSF1B-204ENST00000536782 P0DMU3 169 aa14.12□□□□□ -0.15
TNFRSF1B-204ENST00000536782 FAM231AP0DMU4 169 aa14.12□□□□□ -0.15
TNFRSF1B-204ENST00000536782 FAM231CP0DMU5 169 aa14.12□□□□□ -0.15
TNFRSF1B-204ENST00000536782 ZNF90Q03938 601 aa14.12□□□□□ -0.15
TNFRSF1B-204ENST00000536782 BAK1Q16611 211 aa14.12□□□□□ -0.15
TNFRSF1B-204ENST00000536782 GDF5OSQ5U4N7 250 aa14.12□□□□□ -0.15
TNFRSF1B-204ENST00000536782 LINC00336Q6ZUF6 198 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms