RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 S100A10P60903 97 aa16.99■□□□□ 0.31
SFSWAP-204ENST00000535399 VAMP2P63027 116 aa16.99■□□□□ 0.31
SFSWAP-204ENST00000535399 TCF24Q7RTU0 167 aa16.99■□□□□ 0.31
SFSWAP-204ENST00000535399 OR51G1Q8NGK1 321 aa16.99■□□□□ 0.31
SFSWAP-204ENST00000535399 ASCL2Q99929 193 aa16.99■□□□□ 0.31
SFSWAP-204ENST00000535399 A0A1W2PS18 150 aa16.98■□□□□ 0.31
SFSWAP-204ENST00000535399 OR11H12B2RN74 326 aa16.98■□□□□ 0.31
SFSWAP-204ENST00000535399 DLK1P80370 383 aa16.98■□□□□ 0.31
SFSWAP-204ENST00000535399 ARL16Q0P5N6 197 aa16.98■□□□□ 0.31
SFSWAP-204ENST00000535399 TMEM144Q7Z5S9 345 aa16.98■□□□□ 0.31
SFSWAP-204ENST00000535399 DEFB125Q8N687 156 aa16.98■□□□□ 0.31
SFSWAP-204ENST00000535399 OR10P1Q8NGE3 313 aa16.98■□□□□ 0.31
SFSWAP-204ENST00000535399 TMEM231Q9H6L2 316 aa16.98■□□□□ 0.31
SFSWAP-204ENST00000535399 DFFBO76075 338 aa16.97■□□□□ 0.31
SFSWAP-204ENST00000535399 FABP1P07148 127 aa16.97■□□□□ 0.31
SFSWAP-204ENST00000535399 HNRNPCP07910 306 aaKnown RBP eCLIP16.97■□□□□ 0.313e-8■□□□□ 8.6
SFSWAP-204ENST00000535399 AKR1C1Q04828 323 aa16.97■□□□□ 0.31
SFSWAP-204ENST00000535399 OR2F1Q13607 317 aa16.97■□□□□ 0.31
SFSWAP-204ENST00000535399 RNF125Q96EQ8 232 aa16.97■□□□□ 0.31
SFSWAP-204ENST00000535399 FNDC10F2Z333 226 aa16.96■□□□□ 0.31
SFSWAP-204ENST00000535399 SSNA1O43805 119 aa16.96■□□□□ 0.31
SFSWAP-204ENST00000535399 CD5P06127 495 aa16.96■□□□□ 0.31
SFSWAP-204ENST00000535399 P2RY1P47900 373 aa16.96■□□□□ 0.31
SFSWAP-204ENST00000535399 H2BFSP57053 126 aa16.96■□□□□ 0.31
SFSWAP-204ENST00000535399 RRAS2P62070 204 aaPredicted RBP16.96■□□□□ 0.31
SFSWAP-204ENST00000535399 SBSPONQ8IVN8 264 aa16.96■□□□□ 0.31
SFSWAP-204ENST00000535399 NARS2Q96I59 477 aaKnown RBP16.96■□□□□ 0.31
SFSWAP-204ENST00000535399 NMES1Q9C002 83 aa16.96■□□□□ 0.31
SFSWAP-204ENST00000535399 TUBA4BQ9H853 241 aa16.96■□□□□ 0.31
SFSWAP-204ENST00000535399 IGKV3-7A0A075B6H7 116 aa16.95■□□□□ 0.3
SFSWAP-204ENST00000535399 SMCO3A2RU48 225 aa16.95■□□□□ 0.3
SFSWAP-204ENST00000535399 FAM24AA6NFZ4 105 aa16.95■□□□□ 0.3
SFSWAP-204ENST00000535399 OR4C46A6NHA9 309 aa16.95■□□□□ 0.3
SFSWAP-204ENST00000535399 PVALBP20472 110 aaPredicted RBP16.95■□□□□ 0.3
SFSWAP-204ENST00000535399 BCAP31P51572 246 aa16.95■□□□□ 0.3
SFSWAP-204ENST00000535399 CAV2P51636 162 aa16.95■□□□□ 0.3
SFSWAP-204ENST00000535399 RABAC1Q9UI14 185 aa16.95■□□□□ 0.3
SFSWAP-204ENST00000535399 ALG5Q9Y673 324 aa16.95■□□□□ 0.3
SFSWAP-204ENST00000535399 DEDDO75618 318 aa16.94■□□□□ 0.3
SFSWAP-204ENST00000535399 NHLRC4P0CG21 123 aaPredicted RBP16.94■□□□□ 0.3
SFSWAP-204ENST00000535399 C16orf54Q6UWD8 224 aa16.94■□□□□ 0.3
SFSWAP-204ENST00000535399 LINC00322Q6ZN03 302 aaPredicted RBP16.94■□□□□ 0.3
SFSWAP-204ENST00000535399 TMEM182Q6ZP80 229 aaPredicted RBP16.94■□□□□ 0.3
SFSWAP-204ENST00000535399 GBGT1Q8N5D6 347 aa16.94■□□□□ 0.3
SFSWAP-204ENST00000535399 GLMPQ8WWB7 406 aa16.94■□□□□ 0.3
SFSWAP-204ENST00000535399 PBDC1Q9BVG4 233 aa16.94■□□□□ 0.3
SFSWAP-204ENST00000535399 GGACTQ9BVM4 153 aa16.94■□□□□ 0.3
SFSWAP-204ENST00000535399 LYRM2Q9NU23 88 aaPredicted RBP16.94■□□□□ 0.3
SFSWAP-204ENST00000535399 TFPI2P48307 235 aa16.93■□□□□ 0.3
SFSWAP-204ENST00000535399 LYZP61626 148 aa16.93■□□□□ 0.3
SFSWAP-204ENST00000535399 CYCSP99999 105 aaKnown RBP16.93■□□□□ 0.3
SFSWAP-204ENST00000535399 ODF3L2Q3SX64 289 aa16.93■□□□□ 0.3
SFSWAP-204ENST00000535399 GRAMD2BQ96HH9 432 aa16.93■□□□□ 0.3
SFSWAP-204ENST00000535399 SRD5A3Q9H8P0 318 aa16.93■□□□□ 0.3
SFSWAP-204ENST00000535399 MGAT4CQ9UBM8 478 aa16.93■□□□□ 0.3
SFSWAP-204ENST00000535399 COL7A1Q02388 2944 aa16.93■□□□□ 0.3
SFSWAP-204ENST00000535399 HUWE1Q7Z6Z7 4374 aaKnown RBP16.92■□□□□ 0.3
SFSWAP-204ENST00000535399 IGSF23A1L1A6 192 aa16.92■□□□□ 0.3
SFSWAP-204ENST00000535399 RBMY1BA6NDE4 496 aaKnown RBP16.92■□□□□ 0.3
SFSWAP-204ENST00000535399 RBMY1EA6NEQ0 496 aaKnown RBP16.92■□□□□ 0.3
SFSWAP-204ENST00000535399 BUB3O43684 328 aa16.92■□□□□ 0.3
SFSWAP-204ENST00000535399 CST7O76096 145 aa16.92■□□□□ 0.3
SFSWAP-204ENST00000535399 RBMY1DP0C7P1 496 aaKnown RBP16.92■□□□□ 0.3
SFSWAP-204ENST00000535399 GATA2P23769 480 aaPredicted RBP16.92■□□□□ 0.3
SFSWAP-204ENST00000535399 EIF2B2P49770 351 aaKnown RBP16.92■□□□□ 0.3
SFSWAP-204ENST00000535399 TMEM252Q8N6L7 170 aa16.92■□□□□ 0.3
SFSWAP-204ENST00000535399 STPG3Q8N7X2 389 aa16.92■□□□□ 0.3
SFSWAP-204ENST00000535399 MS4A6AQ9H2W1 248 aa16.92■□□□□ 0.3
SFSWAP-204ENST00000535399 NPVFQ9HCQ7 196 aa16.92■□□□□ 0.3
SFSWAP-204ENST00000535399 UBQLN2Q9UHD9 624 aa16.92■□□□□ 0.3
SFSWAP-204ENST00000535399 H0YIZ8 118 aa16.91■□□□□ 0.3
SFSWAP-204ENST00000535399 CFDP00746 253 aaPredicted RBP16.91■□□□□ 0.3
SFSWAP-204ENST00000535399 RPL11P62913 178 aaKnown RBP16.91■□□□□ 0.3
SFSWAP-204ENST00000535399 PAFAH1B2P68402 229 aa16.91■□□□□ 0.3
SFSWAP-204ENST00000535399 SLC38A11Q08AI6 406 aa16.91■□□□□ 0.3
SFSWAP-204ENST00000535399 CYP2G1PQ6ZSU1 146 aa16.91■□□□□ 0.3
SFSWAP-204ENST00000535399 CITED4Q96RK1 184 aa16.91■□□□□ 0.3
SFSWAP-204ENST00000535399 FAM110AQ9BQ89 295 aa16.91■□□□□ 0.3
SFSWAP-204ENST00000535399 TRAV2A0A0B4J234 112 aa16.9■□□□□ 0.3
SFSWAP-204ENST00000535399 LRRC37A5PQ49AS3 106 aa16.9■□□□□ 0.3
SFSWAP-204ENST00000535399 WFDC3Q8IUB2 231 aa16.9■□□□□ 0.3
SFSWAP-204ENST00000535399 BPIFCQ8NFQ6 507 aa16.9■□□□□ 0.3
SFSWAP-204ENST00000535399 OR5AC2Q9NZP5 309 aa16.9■□□□□ 0.3
SFSWAP-204ENST00000535399 DNASE2O00115 360 aaPredicted RBP16.89■□□□□ 0.29
SFSWAP-204ENST00000535399 RLN2P04090 185 aa16.89■□□□□ 0.29
SFSWAP-204ENST00000535399 NUP62P37198 522 aaPredicted RBP16.89■□□□□ 0.29
SFSWAP-204ENST00000535399 SULT1A1P50225 295 aa16.89■□□□□ 0.29
SFSWAP-204ENST00000535399 HAGHQ16775 308 aa16.89■□□□□ 0.29
SFSWAP-204ENST00000535399 RGS21Q2M5E4 152 aa16.89■□□□□ 0.29
SFSWAP-204ENST00000535399 TMEM217Q8N7C4 229 aa16.89■□□□□ 0.29
SFSWAP-204ENST00000535399 PPP1R1CQ8WVI7 109 aa16.89■□□□□ 0.29
SFSWAP-204ENST00000535399 HELTA6NFD8 242 aa16.88■□□□□ 0.29
SFSWAP-204ENST00000535399 TEPPQ6URK8 271 aa16.88■□□□□ 0.29
SFSWAP-204ENST00000535399 TM2D3Q9BRN9 247 aa16.88■□□□□ 0.29
SFSWAP-204ENST00000535399 PFDN2Q9UHV9 154 aa16.88■□□□□ 0.29
SFSWAP-204ENST00000535399 E5RGE8 158 aa16.87■□□□□ 0.29
SFSWAP-204ENST00000535399 K7EQG2 157 aa16.87■□□□□ 0.29
SFSWAP-204ENST00000535399 CMC4P56277 68 aaPredicted RBP16.87■□□□□ 0.29
SFSWAP-204ENST00000535399 SELENOTP62341 195 aa16.87■□□□□ 0.29
SFSWAP-204ENST00000535399 STX12Q86Y82 276 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms