RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 ATP5SQ99766 215 aa13.15□□□□□ -0.3
CTSB-229ENST00000533572 ELOVL1Q9BW60 279 aa13.15□□□□□ -0.3
CTSB-229ENST00000533572 MFFQ9GZY8 342 aa13.15□□□□□ -0.3
CTSB-229ENST00000533572 TAAR5O14804 337 aa13.14□□□□□ -0.31
CTSB-229ENST00000533572 ARPC5O15511 151 aa13.14□□□□□ -0.31
CTSB-229ENST00000533572 TOMM40O96008 361 aa13.14□□□□□ -0.31
CTSB-229ENST00000533572 IFNA5P01569 189 aa13.14□□□□□ -0.31
CTSB-229ENST00000533572 IGKV1-17P01599 117 aa13.14□□□□□ -0.31
CTSB-229ENST00000533572 RD3LP0DJH9 198 aa13.14□□□□□ -0.31
CTSB-229ENST00000533572 GINS3Q9BRX5 216 aa13.14□□□□□ -0.31
CTSB-229ENST00000533572 WDR83OSQ9Y284 106 aa13.14□□□□□ -0.31
CTSB-229ENST00000533572 UFC1Q9Y3C8 167 aa13.14□□□□□ -0.31
CTSB-229ENST00000533572 A0A0D9SG52 128 aa13.13□□□□□ -0.31
CTSB-229ENST00000533572 RNF222A6NCQ9 220 aa13.13□□□□□ -0.31
CTSB-229ENST00000533572 SMLR1H3BR10 107 aa13.13□□□□□ -0.31
CTSB-229ENST00000533572 K7EMT4 169 aa13.13□□□□□ -0.31
CTSB-229ENST00000533572 S100A7P31151 101 aa13.13□□□□□ -0.31
CTSB-229ENST00000533572 CLINT1Q14677 625 aa13.13□□□□□ -0.31
CTSB-229ENST00000533572 TIGITQ495A1 244 aa13.13□□□□□ -0.31
CTSB-229ENST00000533572 BPIFCQ8NFQ6 507 aa13.13□□□□□ -0.31
CTSB-229ENST00000533572 OR51G1Q8NGK1 321 aa13.13□□□□□ -0.31
CTSB-229ENST00000533572 PARD6GQ9BYG4 376 aaPredicted RBP13.13□□□□□ -0.31
CTSB-229ENST00000533572 KCNIP2Q9NS61 270 aa13.13□□□□□ -0.31
CTSB-229ENST00000533572 LSM4Q9Y4Z0 139 aaKnown RBP13.13□□□□□ -0.31
CTSB-229ENST00000533572 IGKV1D-37A0A075B6S9 117 aa13.12□□□□□ -0.31
CTSB-229ENST00000533572 UBE2L5PA0A1B0GUS4 154 aa13.12□□□□□ -0.31
CTSB-229ENST00000533572 ZNF320A2RRD8 509 aa13.12□□□□□ -0.31
CTSB-229ENST00000533572 A8MWP6 167 aa13.12□□□□□ -0.31
CTSB-229ENST00000533572 YIF1AO95070 293 aa13.12□□□□□ -0.31
CTSB-229ENST00000533572 SYNJ2BPP57105 145 aa13.12□□□□□ -0.31
CTSB-229ENST00000533572 ZFP69Q49AA0 526 aa13.12□□□□□ -0.31
CTSB-229ENST00000533572 S100A7AQ86SG5 101 aa13.12□□□□□ -0.31
CTSB-229ENST00000533572 OR9G4Q8NGQ1 327 aa13.12□□□□□ -0.31
CTSB-229ENST00000533572 SCGB1C1Q8TD33 95 aa13.12□□□□□ -0.31
CTSB-229ENST00000533572 TMEM190Q8WZ59 177 aa13.12□□□□□ -0.31
CTSB-229ENST00000533572 MARC2Q969Z3 335 aa13.12□□□□□ -0.31
CTSB-229ENST00000533572 NEURL2Q9BR09 285 aa13.12□□□□□ -0.31
CTSB-229ENST00000533572 FBXL17Q9UF56 701 aa13.12□□□□□ -0.31
CTSB-229ENST00000533572 PFDN2Q9UHV9 154 aa13.12□□□□□ -0.31
CTSB-229ENST00000533572 ZNF256Q9Y2P7 627 aaPredicted RBP13.12□□□□□ -0.31
CTSB-229ENST00000533572 PUS1Q9Y606 427 aaKnown RBP eCLIP13.12□□□□□ -0.31
CTSB-229ENST00000533572 IGKV1OR2-108A0A075B7D4 117 aa13.11□□□□□ -0.31
CTSB-229ENST00000533572 C17orf112F2Z3M2 114 aa13.11□□□□□ -0.31
CTSB-229ENST00000533572 PFDN1O60925 122 aa13.11□□□□□ -0.31
CTSB-229ENST00000533572 BMI1P35226 326 aa13.11□□□□□ -0.31
CTSB-229ENST00000533572 CAMLGP49069 296 aa13.11□□□□□ -0.31
CTSB-229ENST00000533572 PXDC1Q5TGL8 231 aa13.11□□□□□ -0.31
CTSB-229ENST00000533572 BTNL8Q6UX41 500 aa13.11□□□□□ -0.31
CTSB-229ENST00000533572 CYP2G1PQ6ZSU1 146 aa13.11□□□□□ -0.31
CTSB-229ENST00000533572 KCNRGQ8N5I3 272 aa13.11□□□□□ -0.31
CTSB-229ENST00000533572 OR11H4Q8NGC9 324 aa13.11□□□□□ -0.31
CTSB-229ENST00000533572 PRR25Q96S07 402 aa13.11□□□□□ -0.31
CTSB-229ENST00000533572 WDR61Q9GZS3 305 aaKnown RBP13.11□□□□□ -0.31
CTSB-229ENST00000533572 BORCS7-ASMTA0A0B4J1R7 106 aa13.1□□□□□ -0.31
CTSB-229ENST00000533572 AGPAT2O15120 278 aa13.1□□□□□ -0.31
CTSB-229ENST00000533572 PSG1P11464 419 aa13.1□□□□□ -0.31
CTSB-229ENST00000533572 FGF7P21781 194 aa13.1□□□□□ -0.31
CTSB-229ENST00000533572 TOMM20LQ6UXN7 152 aa13.1□□□□□ -0.31
CTSB-229ENST00000533572 ZNF709Q8N972 641 aa13.1□□□□□ -0.31
CTSB-229ENST00000533572 NARS2Q96I59 477 aaKnown RBP13.1□□□□□ -0.31
CTSB-229ENST00000533572 SMIM3Q9BZL3 60 aa13.1□□□□□ -0.31
CTSB-229ENST00000533572 DAZ1Q9NQZ3 744 aaKnown RBP13.1□□□□□ -0.31
CTSB-229ENST00000533572 SIGLEC8Q9NYZ4 499 aa13.1□□□□□ -0.31
CTSB-229ENST00000533572 SORL1Q92673 2214 aa13.09□□□□□ -0.31
CTSB-229ENST00000533572 IGHV3-35A0A0C4DH35 117 aa13.09□□□□□ -0.31
CTSB-229ENST00000533572 JTBO76095 146 aa13.09□□□□□ -0.31
CTSB-229ENST00000533572 IL4P05112 153 aa13.09□□□□□ -0.31
CTSB-229ENST00000533572 C4BPBP20851 252 aa13.09□□□□□ -0.31
CTSB-229ENST00000533572 RPL29P47914 159 aaKnown RBP13.09□□□□□ -0.31
CTSB-229ENST00000533572 ZNF90Q03938 601 aa13.09□□□□□ -0.31
CTSB-229ENST00000533572 RNF125Q96EQ8 232 aa13.09□□□□□ -0.31
CTSB-229ENST00000533572 MGST2Q99735 147 aa13.09□□□□□ -0.31
CTSB-229ENST00000533572 C20orf24Q9BUV8 137 aa13.09□□□□□ -0.31
CTSB-229ENST00000533572 ZFAND3Q9H8U3 227 aa13.09□□□□□ -0.31
CTSB-229ENST00000533572 MRPL27Q9P0M9 148 aaKnown RBP13.09□□□□□ -0.31
CTSB-229ENST00000533572 SLC45A2Q9UMX9 530 aa13.09□□□□□ -0.31
CTSB-229ENST00000533572 RNF24Q9Y225 148 aa13.09□□□□□ -0.31
CTSB-229ENST00000533572 KANTRA0A1W2PQU2 76 aa13.08□□□□□ -0.32
CTSB-229ENST00000533572 EIF5AP63241 154 aaKnown RBP13.08□□□□□ -0.32
CTSB-229ENST00000533572 OPCMLQ14982 345 aa13.08□□□□□ -0.32
CTSB-229ENST00000533572 Q6ZRG5 221 aa13.08□□□□□ -0.32
CTSB-229ENST00000533572 METTL26Q96S19 204 aa13.08□□□□□ -0.32
CTSB-229ENST00000533572 ARPC5LQ9BPX5 153 aa13.08□□□□□ -0.32
CTSB-229ENST00000533572 NPCDR1Q9BY65 106 aa13.08□□□□□ -0.32
CTSB-229ENST00000533572 A0A1W2PS18 150 aa13.07□□□□□ -0.32
CTSB-229ENST00000533572 NPPCP23582 126 aa13.07□□□□□ -0.32
CTSB-229ENST00000533572 PLP1P60201 277 aa13.07□□□□□ -0.32
CTSB-229ENST00000533572 UNQ9165/PRO28630Q6UXU0 137 aa13.07□□□□□ -0.32
CTSB-229ENST00000533572 GGTLC1Q9BX51 225 aa13.07□□□□□ -0.32
CTSB-229ENST00000533572 TMEM231Q9H6L2 316 aa13.07□□□□□ -0.32
CTSB-229ENST00000533572 RABAC1Q9UI14 185 aa13.07□□□□□ -0.32
CTSB-229ENST00000533572 CD5P06127 495 aa13.06□□□□□ -0.32
CTSB-229ENST00000533572 HNRNPCP07910 306 aaKnown RBP eCLIP13.06□□□□□ -0.321e-6■■□□□ 13.5
CTSB-229ENST00000533572 LINC00869P0C866 280 aa13.06□□□□□ -0.32
CTSB-229ENST00000533572 C8orf88P0DMB2 117 aa13.06□□□□□ -0.32
CTSB-229ENST00000533572 EIF2B2P49770 351 aaKnown RBP13.06□□□□□ -0.32
CTSB-229ENST00000533572 ARL6Q9H0F7 186 aa13.06□□□□□ -0.32
CTSB-229ENST00000533572 WFDC1Q9HC57 220 aa13.06□□□□□ -0.32
CTSB-229ENST00000533572 TIMM9Q9Y5J7 89 aa13.06□□□□□ -0.32
CTSB-229ENST00000533572 ELOA3CA0A087WX78 387 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms