RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 SPAG16Q8N0X2 631 aa9.11□□□□□ -0.95
CAPN1-223ENST00000533079 PUSL1Q8N0Z8 303 aaKnown RBP9.11□□□□□ -0.95
CAPN1-223ENST00000533079 OR11H2Q8NH07 326 aa9.11□□□□□ -0.95
CAPN1-223ENST00000533079 OR4S2Q8NH73 311 aa9.11□□□□□ -0.95
CAPN1-223ENST00000533079 STOML3Q8TAV4 291 aa9.11□□□□□ -0.95
CAPN1-223ENST00000533079 ZNF502Q8TBZ5 544 aa9.11□□□□□ -0.95
CAPN1-223ENST00000533079 GPHA2Q96T91 129 aa9.11□□□□□ -0.95
CAPN1-223ENST00000533079 ATP6V0BQ99437 205 aa9.11□□□□□ -0.95
CAPN1-223ENST00000533079 S4R3C0 116 aa9.11□□□□□ -0.95
CAPN1-223ENST00000533079 PKD1P98161 4303 aa9.11□□□□□ -0.95
CAPN1-223ENST00000533079 DYNC1H1Q14204 4646 aaKnown RBP9.11□□□□□ -0.95
CAPN1-223ENST00000533079 CYB5BO43169 146 aa9.1□□□□□ -0.95
CAPN1-223ENST00000533079 TGOLN2O43493 480 aa9.1□□□□□ -0.95
CAPN1-223ENST00000533079 TSC22D2O75157 780 aa9.1□□□□□ -0.95
CAPN1-223ENST00000533079 IGKV1-5P01602 117 aa9.1□□□□□ -0.95
CAPN1-223ENST00000533079 AREGP15514 252 aa9.1□□□□□ -0.95
CAPN1-223ENST00000533079 RPL12P30050 165 aaKnown RBP9.1□□□□□ -0.95
CAPN1-223ENST00000533079 AP2S1P53680 142 aaPredicted RBP9.1□□□□□ -0.95
CAPN1-223ENST00000533079 TAS2R30P59541 319 aa9.1□□□□□ -0.95
CAPN1-223ENST00000533079 S100A10P60903 97 aa9.1□□□□□ -0.95
CAPN1-223ENST00000533079 AARDQ4LEZ3 155 aa9.1□□□□□ -0.95
CAPN1-223ENST00000533079 CLLU1Q5K131 121 aa9.1□□□□□ -0.95
CAPN1-223ENST00000533079 DMBX1Q8NFW5 382 aa9.1□□□□□ -0.95
CAPN1-223ENST00000533079 OR5B3Q8NH48 314 aa9.1□□□□□ -0.95
CAPN1-223ENST00000533079 SCARB1Q8WTV0 552 aa9.1□□□□□ -0.95
CAPN1-223ENST00000533079 TCTEX1D2Q8WW35 142 aa9.1□□□□□ -0.95
CAPN1-223ENST00000533079 RAB40CQ96S21 281 aa9.1□□□□□ -0.95
CAPN1-223ENST00000533079 E7EUB6 86 aa9.09□□□□□ -0.95
CAPN1-223ENST00000533079 CFDP00746 253 aaPredicted RBP9.09□□□□□ -0.95
CAPN1-223ENST00000533079 RPL8P62917 257 aaKnown RBP9.09□□□□□ -0.95
CAPN1-223ENST00000533079 POU2AF1Q16633 256 aa9.09□□□□□ -0.95
CAPN1-223ENST00000533079 SPSB3Q6PJ21 355 aa9.09□□□□□ -0.95
CAPN1-223ENST00000533079 Q6ZRM9 215 aa9.09□□□□□ -0.95
CAPN1-223ENST00000533079 BSCL2Q96G97 398 aaPredicted RBP9.09□□□□□ -0.95
CAPN1-223ENST00000533079 SRSF8Q9BRL6 282 aaKnown RBP9.09□□□□□ -0.95
CAPN1-223ENST00000533079 AIFM2Q9BRQ8 373 aa9.09□□□□□ -0.95
CAPN1-223ENST00000533079 SLC25A31Q9H0C2 315 aa9.09□□□□□ -0.95
CAPN1-223ENST00000533079 CYTL1Q9NRR1 136 aa9.09□□□□□ -0.95
CAPN1-223ENST00000533079 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.09□□□□□ -0.95
CAPN1-223ENST00000533079 RCL1Q9Y2P8 373 aaKnown RBP9.09□□□□□ -0.95
CAPN1-223ENST00000533079 LSM5Q9Y4Y9 91 aaKnown RBP9.09□□□□□ -0.95
CAPN1-223ENST00000533079 TRAV10A0A0B4J240 114 aa9.08□□□□□ -0.96
CAPN1-223ENST00000533079 A0A0G2JRQ6 117 aa9.08□□□□□ -0.96
CAPN1-223ENST00000533079 A0A1B0GW64 132 aa9.08□□□□□ -0.96
CAPN1-223ENST00000533079 K7EMT4 169 aa9.08□□□□□ -0.96
CAPN1-223ENST00000533079 NDUFA4O00483 81 aa9.08□□□□□ -0.96
CAPN1-223ENST00000533079 FGF2P09038 288 aa9.08□□□□□ -0.96
CAPN1-223ENST00000533079 AKR1C2P52895 323 aa9.08□□□□□ -0.96
CAPN1-223ENST00000533079 PVRIGQ6DKI7 326 aa9.08□□□□□ -0.96
CAPN1-223ENST00000533079 APRG1Q8IVJ8 170 aa9.08□□□□□ -0.96
CAPN1-223ENST00000533079 VKORC1L1Q8N0U8 176 aa9.08□□□□□ -0.96
CAPN1-223ENST00000533079 OR4A5Q8NH83 315 aa9.08□□□□□ -0.96
CAPN1-223ENST00000533079 VN1R17PQ8TDU5 208 aa9.08□□□□□ -0.96
CAPN1-223ENST00000533079 ST8SIA2Q92186 375 aa9.08□□□□□ -0.96
CAPN1-223ENST00000533079 SMIM8Q96KF7 97 aa9.08□□□□□ -0.96
CAPN1-223ENST00000533079 PLA2G2EQ9NZK7 142 aa9.08□□□□□ -0.96
CAPN1-223ENST00000533079 DNAH17Q9UFH2 4485 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 IGHV4-4A0A075B6R2 117 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 LINC00862A6NCI5 91 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 C15orf62A8K5M9 175 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 MED6O75586 246 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 CA1P00915 261 aaPredicted RBP9.07□□□□□ -0.96
CAPN1-223ENST00000533079 HRASP01112 189 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 AMBPP02760 352 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 P0DMU3 169 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 FAM231AP0DMU4 169 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 FAM231CP0DMU5 169 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 TPT1P13693 172 aaKnown RBP9.07□□□□□ -0.96
CAPN1-223ENST00000533079 RAB14P61106 215 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 POLR2GP62487 172 aaKnown RBP eCLIP9.07□□□□□ -0.96
CAPN1-223ENST00000533079 BAXQ07812 192 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 OR2B11Q5JQS5 317 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 BAP18Q8IXM2 172 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 OR52E5Q8NH55 327 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 RNASE11Q8TAA1 199 aaKnown RBP9.07□□□□□ -0.96
CAPN1-223ENST00000533079 LRRC20Q8TCA0 184 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 ZNF471Q9BX82 626 aaPredicted RBP9.07□□□□□ -0.96
CAPN1-223ENST00000533079 ARV1Q9H2C2 271 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 SLC25A32Q9H2D1 315 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 LYRM2Q9NU23 88 aaPredicted RBP9.07□□□□□ -0.96
CAPN1-223ENST00000533079 MED9Q9NWA0 146 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 BET1LQ9NYM9 111 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 HSPB7Q9UBY9 170 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 CACNG5Q9UF02 275 aa9.07□□□□□ -0.96
CAPN1-223ENST00000533079 IGHV3-35A0A0C4DH35 117 aa9.06□□□□□ -0.96
CAPN1-223ENST00000533079 C15orf61A6NNL5 157 aa9.06□□□□□ -0.96
CAPN1-223ENST00000533079 WRBO00258 174 aa9.06□□□□□ -0.96
CAPN1-223ENST00000533079 RTL8CO15255 209 aa9.06□□□□□ -0.96
CAPN1-223ENST00000533079 SYNGR2O43760 224 aa9.06□□□□□ -0.96
CAPN1-223ENST00000533079 SCGB1D2O95969 90 aa9.06□□□□□ -0.96
CAPN1-223ENST00000533079 KRASP01116 189 aa9.06□□□□□ -0.96
CAPN1-223ENST00000533079 REG1AP05451 166 aa9.06□□□□□ -0.96
CAPN1-223ENST00000533079 NQO2P16083 231 aa9.06□□□□□ -0.96
CAPN1-223ENST00000533079 HTR2BP41595 481 aa9.06□□□□□ -0.96
CAPN1-223ENST00000533079 PAX9P55771 341 aa9.06□□□□□ -0.96
CAPN1-223ENST00000533079 VAMP2P63027 116 aa9.06□□□□□ -0.96
CAPN1-223ENST00000533079 TMEM41BQ5BJD5 291 aa9.06□□□□□ -0.96
CAPN1-223ENST00000533079 EIF5AL1Q6IS14 154 aaKnown RBP9.06□□□□□ -0.96
CAPN1-223ENST00000533079 H2BFWTQ7Z2G1 175 aa9.06□□□□□ -0.96
CAPN1-223ENST00000533079 Q8NAQ8 132 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms