RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, human

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-222	ENST00000531551	FHL3	Q13643	280 aa		13.53	□□□□□ -0.24
CTSB-222	ENST00000531551	ZNF709	Q8N972	641 aa		13.53	□□□□□ -0.24
CTSB-222	ENST00000531551	BPIFC	Q8NFQ6	507 aa		13.53	□□□□□ -0.24
CTSB-222	ENST00000531551	RCC1L	Q96I51	464 aa	Known RBP	13.53	□□□□□ -0.24
CTSB-222	ENST00000531551	RSG1	Q9BU20	258 aa		13.53	□□□□□ -0.24
CTSB-222	ENST00000531551	PBDC1	Q9BVG4	233 aa		13.53	□□□□□ -0.24
CTSB-222	ENST00000531551		M0QZ24	198 aa		13.53	□□□□□ -0.24
CTSB-222	ENST00000531551	NDUFA4	O00483	81 aa		13.53	□□□□□ -0.24
CTSB-222	ENST00000531551	MPDU1	O75352	247 aa		13.53	□□□□□ -0.24
CTSB-222	ENST00000531551	IL4	P05112	153 aa		13.53	□□□□□ -0.24
CTSB-222	ENST00000531551	LAMTOR1	Q6IAA8	161 aa		13.53	□□□□□ -0.24
CTSB-222	ENST00000531551	TOMM20L	Q6UXN7	152 aa		13.53	□□□□□ -0.24
CTSB-222	ENST00000531551	UNQ9165/PRO28630	Q6UXU0	137 aa		13.53	□□□□□ -0.24
CTSB-222	ENST00000531551	GPHB5	Q86YW7	130 aa		13.53	□□□□□ -0.24
CTSB-222	ENST00000531551	OR51G1	Q8NGK1	321 aa		13.53	□□□□□ -0.24
CTSB-222	ENST00000531551	DLX4	Q92988	240 aa	Predicted RBP	13.53	□□□□□ -0.24
CTSB-222	ENST00000531551	GGTLC1	Q9BX51	225 aa		13.53	□□□□□ -0.24
CTSB-222	ENST00000531551	CYTL1	Q9NRR1	136 aa		13.53	□□□□□ -0.24
CTSB-222	ENST00000531551	ZNF207	O43670	478 aa	Known RBP	13.52	□□□□□ -0.25
CTSB-222	ENST00000531551	JTB	O76095	146 aa		13.52	□□□□□ -0.25
CTSB-222	ENST00000531551	LYZ	P61626	148 aa		13.52	□□□□□ -0.25
CTSB-222	ENST00000531551	MIC13	Q5XKP0	118 aa		13.52	□□□□□ -0.25
CTSB-222	ENST00000531551	BOLA1	Q9Y3E2	137 aa		13.52	□□□□□ -0.25
CTSB-222	ENST00000531551	C17orf112	F2Z3M2	114 aa		13.51	□□□□□ -0.25
CTSB-222	ENST00000531551	TSPAN15	O95858	294 aa		13.51	□□□□□ -0.25
CTSB-222	ENST00000531551	LINC00869	P0C866	280 aa		13.51	□□□□□ -0.25
CTSB-222	ENST00000531551	SELENOT	P62341	195 aa		13.51	□□□□□ -0.25
CTSB-222	ENST00000531551	KLF5	Q13887	457 aa	Predicted RBP	13.51	□□□□□ -0.25
CTSB-222	ENST00000531551	OPCML	Q14982	345 aa		13.51	□□□□□ -0.25
CTSB-222	ENST00000531551	SLC45A2	Q9UMX9	530 aa		13.51	□□□□□ -0.25
CTSB-222	ENST00000531551	ORM2	P19652	201 aa		13.5	□□□□□ -0.25
CTSB-222	ENST00000531551	C1QL4	Q86Z23	238 aa		13.5	□□□□□ -0.25
CTSB-222	ENST00000531551	STPG3	Q8N7X2	389 aa		13.5	□□□□□ -0.25
CTSB-222	ENST00000531551	ZNF414	Q96IQ9	312 aa		13.5	□□□□□ -0.25
CTSB-222	ENST00000531551	DOK5	Q9P104	306 aa		13.5	□□□□□ -0.25
CTSB-222	ENST00000531551	RFNG	Q9Y644	331 aa		13.5	□□□□□ -0.25
CTSB-222	ENST00000531551	PXMP4	Q9Y6I8	212 aa		13.5	□□□□□ -0.25
CTSB-222	ENST00000531551	ANK2	Q01484	3957 aa		13.5	□□□□□ -0.25
CTSB-222	ENST00000531551	STAB1	Q9NY15	2570 aa		13.5	□□□□□ -0.25
CTSB-222	ENST00000531551	ATP6V0C	P27449	155 aa		13.5	□□□□□ -0.25
CTSB-222	ENST00000531551	B2M	P61769	119 aa		13.5	□□□□□ -0.25
CTSB-222	ENST00000531551	OR1B1	Q8NGR6	318 aa		13.5	□□□□□ -0.25
CTSB-222	ENST00000531551	RNF125	Q96EQ8	232 aa		13.5	□□□□□ -0.25
CTSB-222	ENST00000531551	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.5	□□□□□ -0.25
CTSB-222	ENST00000531551	ZFAND3	Q9H8U3	227 aa		13.5	□□□□□ -0.25
CTSB-222	ENST00000531551	C4BPB	P20851	252 aa		13.49	□□□□□ -0.25
CTSB-222	ENST00000531551	RPL29	P47914	159 aa	Known RBP	13.49	□□□□□ -0.25
CTSB-222	ENST00000531551	KRTAP21-3	Q3LHN1	58 aa		13.49	□□□□□ -0.25
CTSB-222	ENST00000531551	TM4SF20	Q53R12	229 aa		13.49	□□□□□ -0.25
CTSB-222	ENST00000531551		Q6ZRG5	221 aa		13.49	□□□□□ -0.25
CTSB-222	ENST00000531551	TMEM190	Q8WZ59	177 aa		13.49	□□□□□ -0.25
CTSB-222	ENST00000531551	USF2	Q15853	346 aa	Predicted RBP	13.48	□□□□□ -0.25
CTSB-222	ENST00000531551	GINS3	Q9BRX5	216 aa		13.48	□□□□□ -0.25
CTSB-222	ENST00000531551	SH3BGRL3	Q9H299	93 aa		13.48	□□□□□ -0.25
CTSB-222	ENST00000531551	OVOL1	O14753	267 aa		13.48	□□□□□ -0.25
CTSB-222	ENST00000531551	CFD	P00746	253 aa	Predicted RBP	13.48	□□□□□ -0.25
CTSB-222	ENST00000531551	OR5G3	P0C626	314 aa		13.48	□□□□□ -0.25
CTSB-222	ENST00000531551	ELL	P55199	621 aa	Predicted RBP	13.48	□□□□□ -0.25
CTSB-222	ENST00000531551	PRR20E	P86478	221 aa		13.48	□□□□□ -0.25
CTSB-222	ENST00000531551	PRR20C	P86479	221 aa		13.48	□□□□□ -0.25
CTSB-222	ENST00000531551	PRR20D	P86480	221 aa		13.48	□□□□□ -0.25
CTSB-222	ENST00000531551	PRR20B	P86481	221 aa		13.48	□□□□□ -0.25
CTSB-222	ENST00000531551	PRR20A	P86496	221 aa		13.48	□□□□□ -0.25
CTSB-222	ENST00000531551	OR9G4	Q8NGQ1	327 aa		13.48	□□□□□ -0.25
CTSB-222	ENST00000531551	KCNIP2	Q9NS61	270 aa		13.48	□□□□□ -0.25
CTSB-222	ENST00000531551	SLC39A9	Q9NUM3	307 aa		13.48	□□□□□ -0.25
CTSB-222	ENST00000531551	UFC1	Q9Y3C8	167 aa		13.48	□□□□□ -0.25
CTSB-222	ENST00000531551	TRRAP	Q9Y4A5	3859 aa		13.47	□□□□□ -0.25
CTSB-222	ENST00000531551	IGHV3-49	A0A0A0MS15	119 aa		13.47	□□□□□ -0.25
CTSB-222	ENST00000531551	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.47	□□□□□ -0.25
CTSB-222	ENST00000531551	REC114	Q7Z4M0	266 aa		13.47	□□□□□ -0.25
CTSB-222	ENST00000531551	LINC00482	Q8N8I6	264 aa		13.47	□□□□□ -0.25
CTSB-222	ENST00000531551	SLC25A32	Q9H2D1	315 aa		13.47	□□□□□ -0.25
CTSB-222	ENST00000531551	PEMT	Q9UBM1	199 aa		13.47	□□□□□ -0.25
CTSB-222	ENST00000531551	IGHV3OR16-13	A0A075B7E8	117 aa		13.46	□□□□□ -0.25
CTSB-222	ENST00000531551	IGHV3-74	A0A0B4J1X5	117 aa		13.46	□□□□□ -0.25
CTSB-222	ENST00000531551	LGALS9	O00182	355 aa		13.46	□□□□□ -0.25
CTSB-222	ENST00000531551	TPT1	P13693	172 aa	Known RBP	13.46	□□□□□ -0.25
CTSB-222	ENST00000531551	EDN2	P20800	178 aa		13.46	□□□□□ -0.25
CTSB-222	ENST00000531551	EIF5A	P63241	154 aa	Known RBP	13.46	□□□□□ -0.25
CTSB-222	ENST00000531551	FFAR4	Q5NUL3	377 aa		13.46	□□□□□ -0.25
CTSB-222	ENST00000531551	PPP1R14B	Q96C90	147 aa		13.46	□□□□□ -0.25
CTSB-222	ENST00000531551	GNPNAT1	Q96EK6	184 aa	Predicted RBP	13.46	□□□□□ -0.25
CTSB-222	ENST00000531551	METTL26	Q96S19	204 aa		13.46	□□□□□ -0.25
CTSB-222	ENST00000531551	DAZ1	Q9NQZ3	744 aa	Known RBP	13.46	□□□□□ -0.25
CTSB-222	ENST00000531551	RABAC1	Q9UI14	185 aa		13.46	□□□□□ -0.25
CTSB-222	ENST00000531551	COX7A2P2	O60397	106 aa		13.46	□□□□□ -0.26
CTSB-222	ENST00000531551	HYPM	O75409	117 aa		13.46	□□□□□ -0.26
CTSB-222	ENST00000531551	SLC51B	Q86UW2	128 aa		13.46	□□□□□ -0.26
CTSB-222	ENST00000531551	OR2G3	Q8NGZ4	309 aa		13.46	□□□□□ -0.26
CTSB-222	ENST00000531551	TIMM9	Q9Y5J7	89 aa		13.46	□□□□□ -0.26
CTSB-222	ENST00000531551	IGHV3-66	A0A0C4DH42	116 aa		13.45	□□□□□ -0.26
CTSB-222	ENST00000531551	CD33	P20138	364 aa		13.45	□□□□□ -0.26
CTSB-222	ENST00000531551	NPPC	P23582	126 aa		13.45	□□□□□ -0.26
CTSB-222	ENST00000531551	GCSAML	Q5JQS6	135 aa		13.45	□□□□□ -0.26
CTSB-222	ENST00000531551	BAP18	Q8IXM2	172 aa		13.45	□□□□□ -0.26
CTSB-222	ENST00000531551	SPATA3	Q8NHX4	192 aa		13.45	□□□□□ -0.26
CTSB-222	ENST00000531551	SELENOK	Q9Y6D0	94 aa		13.45	□□□□□ -0.26
CTSB-222	ENST00000531551	TMEM213	A2RRL7	107 aa		13.44	□□□□□ -0.26
CTSB-222	ENST00000531551	UHRF2	Q96PU4	802 aa		13.44	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms