RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 C7orf50Q9BRJ6 194 aaKnown RBP11.21□□□□□ -0.61
CHMP4A-203ENST00000527154 CRXO43186 299 aaPredicted RBP11.2□□□□□ -0.62
CHMP4A-203ENST00000527154 NXPH3O95157 252 aa11.2□□□□□ -0.62
CHMP4A-203ENST00000527154 SLC25A4P12235 298 aa11.2□□□□□ -0.62
CHMP4A-203ENST00000527154 OR10J1P30954 320 aa11.2□□□□□ -0.62
CHMP4A-203ENST00000527154 UCP3P55916 312 aa11.2□□□□□ -0.62
CHMP4A-203ENST00000527154 TAS2R46P59540 309 aa11.2□□□□□ -0.62
CHMP4A-203ENST00000527154 KRTAP10-1P60331 282 aa11.2□□□□□ -0.62
CHMP4A-203ENST00000527154 OR4B1Q8NGF8 309 aa11.2□□□□□ -0.62
CHMP4A-203ENST00000527154 S100A16Q96FQ6 103 aaKnown RBP11.2□□□□□ -0.62
CHMP4A-203ENST00000527154 MDFICQ9P1T7 246 aa11.2□□□□□ -0.62
CHMP4A-203ENST00000527154 KLK11Q9UBX7 282 aa11.2□□□□□ -0.62
CHMP4A-203ENST00000527154 TMEM127O75204 238 aa11.19□□□□□ -0.62
CHMP4A-203ENST00000527154 TOMM40O96008 361 aa11.19□□□□□ -0.62
CHMP4A-203ENST00000527154 PRM2P04554 102 aa11.19□□□□□ -0.62
CHMP4A-203ENST00000527154 LINC00315P59091 139 aa11.19□□□□□ -0.62
CHMP4A-203ENST00000527154 LPCAT3Q6P1A2 487 aa11.19□□□□□ -0.62
CHMP4A-203ENST00000527154 LYSMD2Q8IV50 215 aa11.19□□□□□ -0.62
CHMP4A-203ENST00000527154 MAGT1Q9H0U3 335 aa11.19□□□□□ -0.62
CHMP4A-203ENST00000527154 PTTG2Q9NZH5 202 aa11.19□□□□□ -0.62
CHMP4A-203ENST00000527154 KRTAP29-1A8MX34 341 aaPredicted RBP11.18□□□□□ -0.62
CHMP4A-203ENST00000527154 F6UB75 175 aa11.18□□□□□ -0.62
CHMP4A-203ENST00000527154 ISLRO14498 428 aa11.18□□□□□ -0.62
CHMP4A-203ENST00000527154 DEFB130BP0DP73 79 aa11.18□□□□□ -0.62
CHMP4A-203ENST00000527154 DEFB130AP0DP74 79 aa11.18□□□□□ -0.62
CHMP4A-203ENST00000527154 S100GP29377 79 aa11.18□□□□□ -0.62
CHMP4A-203ENST00000527154 ETV6P41212 452 aa11.18□□□□□ -0.62
CHMP4A-203ENST00000527154 RND2P52198 227 aa11.18□□□□□ -0.62
CHMP4A-203ENST00000527154 TAS2R20P59543 309 aa11.18□□□□□ -0.62
CHMP4A-203ENST00000527154 CLINT1Q14677 625 aa11.18□□□□□ -0.62
CHMP4A-203ENST00000527154 UBE2NLQ5JXB2 153 aa11.18□□□□□ -0.62
CHMP4A-203ENST00000527154 TMEM69Q5SWH9 247 aa11.18□□□□□ -0.62
CHMP4A-203ENST00000527154 GPR146Q96CH1 333 aa11.18□□□□□ -0.62
CHMP4A-203ENST00000527154 MRPS16Q9Y3D3 137 aaKnown RBP11.18□□□□□ -0.62
CHMP4A-203ENST00000527154 LRP1Q07954 4544 aaKnown RBP11.17□□□□□ -0.62
CHMP4A-203ENST00000527154 ZNF705GA8MUZ8 300 aaPredicted RBP11.17□□□□□ -0.62
CHMP4A-203ENST00000527154 J3QL48 77 aa11.17□□□□□ -0.62
CHMP4A-203ENST00000527154 NUP62P37198 522 aaPredicted RBP11.17□□□□□ -0.62
CHMP4A-203ENST00000527154 ID1P41134 155 aa11.17□□□□□ -0.62
CHMP4A-203ENST00000527154 RND3P61587 244 aa11.17□□□□□ -0.62
CHMP4A-203ENST00000527154 B2MP61769 119 aa11.17□□□□□ -0.62
CHMP4A-203ENST00000527154 C2orf83Q53S99 150 aa11.17□□□□□ -0.62
CHMP4A-203ENST00000527154 OR8G2PQ6IF36 304 aa11.17□□□□□ -0.62
CHMP4A-203ENST00000527154 SLC24A4Q8NFF2 622 aa11.17□□□□□ -0.62
CHMP4A-203ENST00000527154 RNASEH2CQ8TDP1 164 aaKnown RBP11.17□□□□□ -0.62
CHMP4A-203ENST00000527154 TMEM170AQ8WVE7 144 aa11.17□□□□□ -0.62
CHMP4A-203ENST00000527154 LINC00052Q96N35 136 aa11.17□□□□□ -0.62
CHMP4A-203ENST00000527154 ABHD1Q96SE0 405 aa11.17□□□□□ -0.62
CHMP4A-203ENST00000527154 RD3LP0DJH9 198 aa11.16□□□□□ -0.62
CHMP4A-203ENST00000527154 PSG1P11464 419 aa11.16□□□□□ -0.62
CHMP4A-203ENST00000527154 ELK1P19419 428 aa11.16□□□□□ -0.62
CHMP4A-203ENST00000527154 HLA-DMAP28067 261 aa11.16□□□□□ -0.62
CHMP4A-203ENST00000527154 HRH1P35367 487 aa11.16□□□□□ -0.62
CHMP4A-203ENST00000527154 FUSP35637 526 aaKnown RBP eCLIP11.16□□□□□ -0.62
CHMP4A-203ENST00000527154 DLK1P80370 383 aa11.16□□□□□ -0.62
CHMP4A-203ENST00000527154 ICAM4Q14773 271 aa11.16□□□□□ -0.62
CHMP4A-203ENST00000527154 NEDD8Q15843 81 aa11.16□□□□□ -0.62
CHMP4A-203ENST00000527154 ESRGQ1W209 222 aa11.16□□□□□ -0.62
CHMP4A-203ENST00000527154 C1orf194Q5T5A4 169 aa11.16□□□□□ -0.62
CHMP4A-203ENST00000527154 EBLN2Q6P2I7 272 aa11.16□□□□□ -0.62
CHMP4A-203ENST00000527154 Q6ZSN1 163 aa11.16□□□□□ -0.62
CHMP4A-203ENST00000527154 CROCCP3Q8IVE0 287 aa11.16□□□□□ -0.62
CHMP4A-203ENST00000527154 SAMD12Q8N8I0 201 aa11.16□□□□□ -0.62
CHMP4A-203ENST00000527154 OR4C16Q8NGL9 310 aa11.16□□□□□ -0.62
CHMP4A-203ENST00000527154 OR52E5Q8NH55 327 aa11.16□□□□□ -0.62
CHMP4A-203ENST00000527154 RXFP4Q8TDU9 374 aa11.16□□□□□ -0.62
CHMP4A-203ENST00000527154 ZNF586Q9NXT0 402 aa11.16□□□□□ -0.62
CHMP4A-203ENST00000527154 DOK5Q9P104 306 aa11.16□□□□□ -0.62
CHMP4A-203ENST00000527154 H3BNG1 76 aa11.15□□□□□ -0.62
CHMP4A-203ENST00000527154 M0QYG6 137 aa11.15□□□□□ -0.62
CHMP4A-203ENST00000527154 SMR3BP02814 79 aaPredicted RBP11.15□□□□□ -0.62
CHMP4A-203ENST00000527154 AZU1P20160 251 aa11.15□□□□□ -0.62
CHMP4A-203ENST00000527154 PRSS3P35030 304 aa11.15□□□□□ -0.62
CHMP4A-203ENST00000527154 HTR2BP41595 481 aa11.15□□□□□ -0.62
CHMP4A-203ENST00000527154 TSPAN5P62079 268 aa11.15□□□□□ -0.62
CHMP4A-203ENST00000527154 FCN2Q15485 313 aa11.15□□□□□ -0.62
CHMP4A-203ENST00000527154 LINC00612Q8N6U2 182 aa11.15□□□□□ -0.62
CHMP4A-203ENST00000527154 COQ8AQ8NI60 647 aa11.15□□□□□ -0.62
CHMP4A-203ENST00000527154 RNF125Q96EQ8 232 aa11.15□□□□□ -0.62
CHMP4A-203ENST00000527154 TGFBR1P36897 503 aa11.14□□□□□ -0.63
CHMP4A-203ENST00000527154 SUPT4H1P63272 117 aaKnown RBP11.14□□□□□ -0.63
CHMP4A-203ENST00000527154 SERTAD4-AS1Q5TG53 156 aa11.14□□□□□ -0.63
CHMP4A-203ENST00000527154 SAMD13Q5VXD3 122 aa11.14□□□□□ -0.63
CHMP4A-203ENST00000527154 OR51G1Q8NGK1 321 aa11.14□□□□□ -0.63
CHMP4A-203ENST00000527154 C20orf173Q96LM9 149 aa11.14□□□□□ -0.63
CHMP4A-203ENST00000527154 TMEM208Q9BTX3 173 aa11.14□□□□□ -0.63
CHMP4A-203ENST00000527154 PDCD10Q9BUL8 212 aa11.14□□□□□ -0.63
CHMP4A-203ENST00000527154 FAT3Q8TDW7 4589 aa11.14□□□□□ -0.63
CHMP4A-203ENST00000527154 A0A0G2JRQ6 117 aa11.13□□□□□ -0.63
CHMP4A-203ENST00000527154 FAM229AH3BQW9 127 aa11.13□□□□□ -0.63
CHMP4A-203ENST00000527154 SPCS3P61009 180 aa11.13□□□□□ -0.63
CHMP4A-203ENST00000527154 OR11H7Q8NGC8 314 aa11.13□□□□□ -0.63
CHMP4A-203ENST00000527154 NPIPB3Q92617 1050 aa11.13□□□□□ -0.63
CHMP4A-203ENST00000527154 UHRF2Q96PU4 802 aa11.13□□□□□ -0.63
CHMP4A-203ENST00000527154 TP53RKQ96S44 253 aa11.13□□□□□ -0.63
CHMP4A-203ENST00000527154 RPRMQ9NS64 109 aa11.13□□□□□ -0.63
CHMP4A-203ENST00000527154 INSP01308 110 aa11.12□□□□□ -0.63
CHMP4A-203ENST00000527154 RPS19P39019 145 aaKnown RBP11.12□□□□□ -0.63
CHMP4A-203ENST00000527154 AKR1C2P52895 323 aa11.12□□□□□ -0.63
CHMP4A-203ENST00000527154 ERVFC1-1P60608 527 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms