RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 RNF183Q96D59 192 aa10.3□□□□□ -0.76
FGFR1-227ENST00000526570 APOBEC3AP31941 199 aaPredicted RBP10.3□□□□□ -0.76
FGFR1-227ENST00000526570 SPSB3Q6PJ21 355 aa10.3□□□□□ -0.76
FGFR1-227ENST00000526570 GBF1Q92538 1859 aa10.3□□□□□ -0.76
FGFR1-227ENST00000526570 PSG4Q00888 419 aa10.3□□□□□ -0.76
FGFR1-227ENST00000526570 MIR17HGQ75NE6 70 aa10.3□□□□□ -0.76
FGFR1-227ENST00000526570 SRXN1Q9BYN0 137 aa10.3□□□□□ -0.76
FGFR1-227ENST00000526570 PNRC2Q9NPJ4 139 aaKnown RBP10.3□□□□□ -0.76
FGFR1-227ENST00000526570 GVINP1Q7Z2Y8 2422 aa10.3□□□□□ -0.76
FGFR1-227ENST00000526570 TMEM30BQ3MIR4 351 aa10.29□□□□□ -0.76
FGFR1-227ENST00000526570 C16orf92Q96LL3 132 aa10.29□□□□□ -0.76
FGFR1-227ENST00000526570 PDCD11Q14690 1871 aaKnown RBP10.29□□□□□ -0.76
FGFR1-227ENST00000526570 CGB1A6NKQ9 187 aa10.29□□□□□ -0.76
FGFR1-227ENST00000526570 C9JCJ5 164 aa10.29□□□□□ -0.76
FGFR1-227ENST00000526570 MCRIP2Q9BUT9 160 aaKnown RBP10.29□□□□□ -0.76
FGFR1-227ENST00000526570 TM2D1Q9BX74 207 aa10.29□□□□□ -0.76
FGFR1-227ENST00000526570 IGKV3-7A0A075B6H7 116 aa10.29□□□□□ -0.76
FGFR1-227ENST00000526570 C1QL2Q7Z5L3 287 aa10.29□□□□□ -0.76
FGFR1-227ENST00000526570 SIGLEC12Q96PQ1 595 aa10.29□□□□□ -0.76
FGFR1-227ENST00000526570 TRAV13-1A0A0B4J241 112 aa10.29□□□□□ -0.76
FGFR1-227ENST00000526570 IGHV1-24A0A0C4DH33 117 aa10.29□□□□□ -0.76
FGFR1-227ENST00000526570 IGKV3-11P04433 115 aa10.29□□□□□ -0.76
FGFR1-227ENST00000526570 RPL27AP46776 148 aaKnown RBP10.29□□□□□ -0.76
FGFR1-227ENST00000526570 SRSF2Q01130 221 aaKnown RBP10.29□□□□□ -0.76
FGFR1-227ENST00000526570 FAM27BQ5VT28 67 aa10.29□□□□□ -0.76
FGFR1-227ENST00000526570 H7C1H1 209 aa10.29□□□□□ -0.76
FGFR1-227ENST00000526570 LINC00271P0C7V0 271 aa10.29□□□□□ -0.76
FGFR1-227ENST00000526570 SAA1P0DJI8 122 aaPredicted RBP10.29□□□□□ -0.76
FGFR1-227ENST00000526570 PPIFP30405 207 aaKnown RBP10.29□□□□□ -0.76
FGFR1-227ENST00000526570 KLRD1Q13241 179 aa10.29□□□□□ -0.76
FGFR1-227ENST00000526570 ASCL5Q7RTU5 278 aa10.29□□□□□ -0.76
FGFR1-227ENST00000526570 RLFQ13129 1914 aa10.29□□□□□ -0.76
FGFR1-227ENST00000526570 LINC01549A6NIU2 74 aa10.28□□□□□ -0.76
FGFR1-227ENST00000526570 U3KQE9 123 aa10.28□□□□□ -0.76
FGFR1-227ENST00000526570 AMTNQ6UX39 209 aa10.28□□□□□ -0.76
FGFR1-227ENST00000526570 M0R381 172 aa10.28□□□□□ -0.76
FGFR1-227ENST00000526570 SOCS3O14543 225 aa10.28□□□□□ -0.76
FGFR1-227ENST00000526570 SS18L1O75177 396 aaPredicted RBP10.28□□□□□ -0.76
FGFR1-227ENST00000526570 IGKV1D-42A0A075B6H8 117 aa10.28□□□□□ -0.76
FGFR1-227ENST00000526570 TCF15Q12870 199 aa10.28□□□□□ -0.76
FGFR1-227ENST00000526570 PCSK4Q6UW60 755 aa10.28□□□□□ -0.76
FGFR1-227ENST00000526570 SH2D6Q7Z4S9 175 aa10.28□□□□□ -0.76
FGFR1-227ENST00000526570 SAXO1Q8IYX7 474 aa10.28□□□□□ -0.76
FGFR1-227ENST00000526570 VDAC2P45880 294 aaPredicted RBP10.27□□□□□ -0.76
FGFR1-227ENST00000526570 GATD1Q8NB37 220 aa10.27□□□□□ -0.76
FGFR1-227ENST00000526570 OR11H6Q8NGC7 330 aa10.27□□□□□ -0.76
FGFR1-227ENST00000526570 C1RLQ9NZP8 487 aa10.27□□□□□ -0.76
FGFR1-227ENST00000526570 IGKV3D-15A0A087WSY6 115 aa10.27□□□□□ -0.77
FGFR1-227ENST00000526570 ATOX1O00244 68 aa10.27□□□□□ -0.77
FGFR1-227ENST00000526570 IL18BPO95998 194 aa10.27□□□□□ -0.77
FGFR1-227ENST00000526570 IGKV3-15P01624 115 aa10.27□□□□□ -0.77
FGFR1-227ENST00000526570 CCL8P80075 99 aa10.27□□□□□ -0.77
FGFR1-227ENST00000526570 ZNF146Q15072 292 aa10.27□□□□□ -0.77
FGFR1-227ENST00000526570 ZNF319Q9P2F9 582 aa10.27□□□□□ -0.77
FGFR1-227ENST00000526570 FOXI3A8MTJ6 420 aaPredicted RBP10.27□□□□□ -0.77
FGFR1-227ENST00000526570 NPFFO15130 113 aa10.27□□□□□ -0.77
FGFR1-227ENST00000526570 IFI27P40305 119 aaPredicted RBP10.27□□□□□ -0.77
FGFR1-227ENST00000526570 C3orf56Q8N813 242 aa10.27□□□□□ -0.77
FGFR1-227ENST00000526570 PLEKHB2Q96CS7 222 aa10.27□□□□□ -0.77
FGFR1-227ENST00000526570 LHFPL6Q9Y693 200 aa10.27□□□□□ -0.77
FGFR1-227ENST00000526570 LY96Q9Y6Y9 160 aa10.27□□□□□ -0.77
FGFR1-227ENST00000526570 RFPL3SP0C7P2 107 aa10.27□□□□□ -0.77
FGFR1-227ENST00000526570 FAM106CPP0CH98 169 aa10.27□□□□□ -0.77
FGFR1-227ENST00000526570 FAM106AQ4KMX7 169 aa10.27□□□□□ -0.77
FGFR1-227ENST00000526570 SLC25A48Q6ZT89 311 aaKnown RBP10.27□□□□□ -0.77
FGFR1-227ENST00000526570 PRR32B1ATL7 298 aa10.26□□□□□ -0.77
FGFR1-227ENST00000526570 IGHG4P01861 327 aa10.26□□□□□ -0.77
FGFR1-227ENST00000526570 LAGE3Q14657 143 aa10.26□□□□□ -0.77
FGFR1-227ENST00000526570 IGKV3D-11A0A0A0MRZ8 115 aa10.26□□□□□ -0.77
FGFR1-227ENST00000526570 hCG_38984A0A1B0GV85 526 aa10.26□□□□□ -0.77
FGFR1-227ENST00000526570 TGFBR3LH3BV60 316 aa10.26□□□□□ -0.77
FGFR1-227ENST00000526570 SIVA1O15304 175 aa10.26□□□□□ -0.77
FGFR1-227ENST00000526570 CSRP1P21291 193 aaKnown RBP10.26□□□□□ -0.77
FGFR1-227ENST00000526570 ID3Q02535 119 aa10.26□□□□□ -0.77
FGFR1-227ENST00000526570 CD59P13987 128 aa10.26□□□□□ -0.77
FGFR1-227ENST00000526570 HCP5Q6MZN7 132 aa10.26□□□□□ -0.77
FGFR1-227ENST00000526570 LYPD6BQ8NI32 183 aa10.26□□□□□ -0.77
FGFR1-227ENST00000526570 ZNF625Q96I27 306 aaPredicted RBP10.26□□□□□ -0.77
FGFR1-227ENST00000526570 SPATA25Q9BR10 227 aa10.26□□□□□ -0.77
FGFR1-227ENST00000526570 SLC25A47Q6Q0C1 308 aa10.26□□□□□ -0.77
FGFR1-227ENST00000526570 NTN5Q8WTR8 489 aaPredicted RBP10.26□□□□□ -0.77
FGFR1-227ENST00000526570 METTL26Q96S19 204 aa10.26□□□□□ -0.77
FGFR1-227ENST00000526570 PAQR4Q8N4S7 273 aaPredicted RBP10.25□□□□□ -0.77
FGFR1-227ENST00000526570 GCSAMQ8N6F7 178 aa10.25□□□□□ -0.77
FGFR1-227ENST00000526570 CHCHD2Q9Y6H1 151 aaPredicted RBP10.25□□□□□ -0.77
FGFR1-227ENST00000526570 CKAP5Q14008 2032 aa10.25□□□□□ -0.77
FGFR1-227ENST00000526570 C9orf172C9J069 976 aa10.25□□□□□ -0.77
FGFR1-227ENST00000526570 F2RL2O00254 374 aa10.25□□□□□ -0.77
FGFR1-227ENST00000526570 RBX1P62877 108 aa10.25□□□□□ -0.77
FGFR1-227ENST00000526570 HGFACQ04756 655 aa10.25□□□□□ -0.77
FGFR1-227ENST00000526570 LHFPL1Q86WI0 220 aa10.25□□□□□ -0.77
FGFR1-227ENST00000526570 MGAMO43451 1857 aa10.25□□□□□ -0.77
FGFR1-227ENST00000526570 A0A0U1RQV1 116 aa10.25□□□□□ -0.77
FGFR1-227ENST00000526570 IGLC1P0CG04 106 aa10.25□□□□□ -0.77
FGFR1-227ENST00000526570 UBL5Q9BZL1 73 aa10.25□□□□□ -0.77
FGFR1-227ENST00000526570 DEPPQ9NTK1 212 aa10.25□□□□□ -0.77
FGFR1-227ENST00000526570 TOMM7Q9P0U1 55 aa10.25□□□□□ -0.77
FGFR1-227ENST00000526570 LAMTOR3Q9UHA4 124 aa10.25□□□□□ -0.77
FGFR1-227ENST00000526570 A0A0A6YYD4 124 aa10.24□□□□□ -0.77
FGFR1-227ENST00000526570 IGKV3OR2-268A0A0C4DH90 116 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms