RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 TCF21O43680 179 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 ADAP1O75689 374 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 ARL6IP5O75915 188 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 OR7C1O76099 320 aaPredicted RBP2.45□□□□□ -2.02
CD44-219ENST00000525685 IFNA21P01568 189 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 IFNA5P01569 189 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 IGHV1-69P01742 117 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 CRYGBP07316 175 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 UBBP0CG47 229 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 RD3LP0DJH9 198 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 CD37P11049 281 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 GTF2F2P13984 249 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 PRTN3P24158 256 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 GADD45AP24522 165 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 MYL9P24844 172 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 HTR2CP28335 458 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 SLC6A1P30531 599 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 SSTR5P35346 364 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 TGFBR1P36897 503 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 UBE2AP49459 152 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 CLDN12P56749 244 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 QRFPP83859 136 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 PAX5Q02548 391 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 AESQ08117 197 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 TAF9Q16594 264 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 TMEM183BQ1AE95 376 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 DEFB112Q30KQ8 113 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 KRTAP21-3Q3LHN1 58 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 UQCC3Q6UW78 93 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 BRD3OSQ6XYD6 125 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 OR2W3Q7Z3T1 314 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 TRAPPC6BQ86SZ2 158 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 TMEM183AQ8IXX5 376 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 BOD1L2Q8IYS8 172 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 OSR2Q8N2R0 312 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 SIGLECL1Q8N7X8 197 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 ZDHHC22Q8N966 263 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 HSD17B11Q8NBQ5 300 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 NPBQ8NG41 125 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 DYNC2LI1Q8TCX1 351 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 YIPF6Q96EC8 236 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 SMIM12Q96EX1 92 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 ZNF714Q96N38 554 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 TMEM59Q9BXS4 323 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 CST11Q9H112 138 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 BANF2Q9H503 90 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 NIT2Q9NQR4 276 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 TXNL4BQ9NX01 149 aaKnown RBP2.45□□□□□ -2.02
CD44-219ENST00000525685 SLC2A8Q9NY64 477 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 RSL24D1Q9UHA3 163 aaKnown RBP2.45□□□□□ -2.02
CD44-219ENST00000525685 FLVCR2Q9UPI3 526 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 LINC00312Q9Y6C7 94 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 FN1P02751 2386 aaKnown RBP2.45□□□□□ -2.02
CD44-219ENST00000525685 CENPEQ02224 2701 aa2.45□□□□□ -2.02
CD44-219ENST00000525685 HIVEP1P15822 2718 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 CCDC168Q8NDH2 2452 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.44□□□□□ -2.02
CD44-219ENST00000525685 MEIKINA0A087WXM9 373 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 TRGV10A0A0A0MS01 117 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 IGHV2-26A0A0B4J1V2 119 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 TRAV39A0A0B4J263 110 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 KIR2DL5BA0A0G2JN68 375 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 KIR2DL5BA0A0G2JPC4 375 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 TMEM30CPA0ZSE6 113 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 LINC00862A6NCI5 91 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 CCDC160A6NGH7 325 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 IFITM5A6NNB3 132 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 ODF3BA8MYP8 253 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 LEUTXA8MZ59 168 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 KRTAP4-16G5E9R7 235 aaPredicted RBP2.44□□□□□ -2.02
CD44-219ENST00000525685 TEX46H3BTG2 121 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 AIPO00170 330 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 PDCD5O14737 125 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 RAB29O14966 203 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 NPFFO15130 113 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 SNAI2O43623 268 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 AIREO43918 545 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 PDCD6O75340 191 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 RBP4P02753 201 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 PRB2P02812 416 aaPredicted RBP2.44□□□□□ -2.02
CD44-219ENST00000525685 TCRBP04435 133 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 ZNF728P0DKX0 622 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 CGB3P0DN86 165 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 CGB7P0DN87 165 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 IGHV1-8P0DP01 117 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 RAB3BP20337 219 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 OMGP23515 440 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 SERPINB10P48595 397 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 UBE2E1P51965 193 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 SEC61GP60059 68 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 NCS1P62166 190 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 REG3AQ06141 175 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 MEF2CQ06413 473 aaPredicted RBP2.44□□□□□ -2.02
CD44-219ENST00000525685 RNASE10Q5GAN6 216 aaKnown RBP2.44□□□□□ -2.02
CD44-219ENST00000525685 LDLRAD2Q5SZI1 272 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 TRIQKQ629K1 86 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 LPCAT3Q6P1A2 487 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 SFXN4Q6P4A7 337 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 KIR2DL5AQ8N109 375 aa2.44□□□□□ -2.02
CD44-219ENST00000525685 DYNAPQ8N1N2 210 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms