RNA–Protein interactions for RNA: ENST00000523699.5

CDK16-222, Transcript of cyclin dependent kinase 16, human

TSL 5

Gene CDK16, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-222	ENST00000523699	RBMY1F	Q15415	496 aa	Known RBP	11.37	□□□□□ -0.59
CDK16-222	ENST00000523699	OR51G1	Q8NGK1	321 aa		11.37	□□□□□ -0.59
CDK16-222	ENST00000523699	RNF125	Q96EQ8	232 aa		11.37	□□□□□ -0.59
CDK16-222	ENST00000523699	SLC35E1	Q96K37	410 aa		11.37	□□□□□ -0.59
CDK16-222	ENST00000523699	BCL7B	Q9BQE9	202 aa		11.37	□□□□□ -0.59
CDK16-222	ENST00000523699	PBDC1	Q9BVG4	233 aa		11.37	□□□□□ -0.59
CDK16-222	ENST00000523699	HSPB7	Q9UBY9	170 aa		11.37	□□□□□ -0.59
CDK16-222	ENST00000523699	SHPK	Q9UHJ6	478 aa		11.37	□□□□□ -0.59
CDK16-222	ENST00000523699	ZFP92	A6NM28	416 aa		11.36	□□□□□ -0.59
CDK16-222	ENST00000523699	BUB3	O43684	328 aa		11.36	□□□□□ -0.59
CDK16-222	ENST00000523699	PSG1	P11464	419 aa		11.36	□□□□□ -0.59
CDK16-222	ENST00000523699	AKR1C4	P17516	323 aa		11.36	□□□□□ -0.59
CDK16-222	ENST00000523699	FAU	P35544	74 aa	Known RBP	11.36	□□□□□ -0.59
CDK16-222	ENST00000523699	ATP5I	P56385	69 aa	Predicted RBP	11.36	□□□□□ -0.59
CDK16-222	ENST00000523699	KLF9	Q13886	244 aa	Predicted RBP	11.36	□□□□□ -0.59
CDK16-222	ENST00000523699	OR8G2P	Q6IF36	304 aa		11.36	□□□□□ -0.59
CDK16-222	ENST00000523699		Q6ZTC4	211 aa		11.36	□□□□□ -0.59
CDK16-222	ENST00000523699	OR1S1	Q8NH92	325 aa		11.36	□□□□□ -0.59
CDK16-222	ENST00000523699	TMEM170A	Q8WVE7	144 aa		11.36	□□□□□ -0.59
CDK16-222	ENST00000523699		X6R8D5	127 aa		11.36	□□□□□ -0.59
CDK16-222	ENST00000523699	TMBIM6	P55061	237 aa		11.35	□□□□□ -0.59
CDK16-222	ENST00000523699	RBKS	Q9H477	322 aa		11.35	□□□□□ -0.59
CDK16-222	ENST00000523699	PRR13	Q9NZ81	148 aa		11.35	□□□□□ -0.59
CDK16-222	ENST00000523699	ID1	P41134	155 aa		11.34	□□□□□ -0.59
CDK16-222	ENST00000523699	LYZL2	Q7Z4W2	148 aa		11.34	□□□□□ -0.59
CDK16-222	ENST00000523699	COQ8A	Q8NI60	647 aa		11.34	□□□□□ -0.59
CDK16-222	ENST00000523699	DYNC2LI1	Q8TCX1	351 aa		11.34	□□□□□ -0.59
CDK16-222	ENST00000523699	PPP1R14B	Q96C90	147 aa		11.34	□□□□□ -0.59
CDK16-222	ENST00000523699	APLN	Q9ULZ1	77 aa		11.34	□□□□□ -0.59
CDK16-222	ENST00000523699	IGHV4-4	A0A075B6R2	117 aa		11.33	□□□□□ -0.6
CDK16-222	ENST00000523699	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.33	□□□□□ -0.6
CDK16-222	ENST00000523699	DUXB	A0A1W2PPF3	345 aa		11.33	□□□□□ -0.6
CDK16-222	ENST00000523699	FABP12	A6NFH5	140 aa		11.33	□□□□□ -0.6
CDK16-222	ENST00000523699	HLA-DRB4	P13762	266 aa		11.33	□□□□□ -0.6
CDK16-222	ENST00000523699	GPX4	P36969	197 aa	Predicted RBP	11.33	□□□□□ -0.6
CDK16-222	ENST00000523699	NKX2-1	P43699	371 aa	Predicted RBP	11.33	□□□□□ -0.6
CDK16-222	ENST00000523699	AP3S2	P59780	193 aa		11.33	□□□□□ -0.6
CDK16-222	ENST00000523699	RAB11A	P62491	216 aa		11.33	□□□□□ -0.6
CDK16-222	ENST00000523699	CSNK1G2-AS1	Q8NCQ2	148 aa		11.33	□□□□□ -0.6
CDK16-222	ENST00000523699	RNF126	Q9BV68	326 aa		11.33	□□□□□ -0.6
CDK16-222	ENST00000523699	XCL2	Q9UBD3	114 aa		11.33	□□□□□ -0.6
CDK16-222	ENST00000523699	HLA-DRB4	X5D2U9	266 aa		11.33	□□□□□ -0.6
CDK16-222	ENST00000523699		H3BMM0	161 aa		11.32	□□□□□ -0.6
CDK16-222	ENST00000523699	AMBP	P02760	352 aa		11.32	□□□□□ -0.6
CDK16-222	ENST00000523699	LYZ	P61626	148 aa		11.32	□□□□□ -0.6
CDK16-222	ENST00000523699	PRR20E	P86478	221 aa		11.32	□□□□□ -0.6
CDK16-222	ENST00000523699	PRR20C	P86479	221 aa		11.32	□□□□□ -0.6
CDK16-222	ENST00000523699	PRR20D	P86480	221 aa		11.32	□□□□□ -0.6
CDK16-222	ENST00000523699	PRR20B	P86481	221 aa		11.32	□□□□□ -0.6
CDK16-222	ENST00000523699	PRR20A	P86496	221 aa		11.32	□□□□□ -0.6
CDK16-222	ENST00000523699	SAMD13	Q5VXD3	122 aa		11.32	□□□□□ -0.6
CDK16-222	ENST00000523699	TMED4	Q7Z7H5	227 aa		11.32	□□□□□ -0.6
CDK16-222	ENST00000523699	PAIP2B	Q9ULR5	123 aa	Known RBP	11.32	□□□□□ -0.6
CDK16-222	ENST00000523699	DEFB131B	A0A096LNP1	70 aa		11.31	□□□□□ -0.6
CDK16-222	ENST00000523699	TMEM189	A5PLL7	270 aa		11.31	□□□□□ -0.6
CDK16-222	ENST00000523699	PSMB3	P49720	205 aa		11.31	□□□□□ -0.6
CDK16-222	ENST00000523699	SUPT4H1	P63272	117 aa	Known RBP	11.31	□□□□□ -0.6
CDK16-222	ENST00000523699	C1orf194	Q5T5A4	169 aa		11.31	□□□□□ -0.6
CDK16-222	ENST00000523699	FOXI2	Q6ZQN5	318 aa		11.31	□□□□□ -0.6
CDK16-222	ENST00000523699	MCFD2	Q8NI22	146 aa		11.31	□□□□□ -0.6
CDK16-222	ENST00000523699	LINC00052	Q96N35	136 aa		11.31	□□□□□ -0.6
CDK16-222	ENST00000523699	SNRPGP15	A8MWD9	76 aa		11.3	□□□□□ -0.6
CDK16-222	ENST00000523699	MED6	O75586	246 aa		11.3	□□□□□ -0.6
CDK16-222	ENST00000523699	VAMP1	P23763	118 aa		11.3	□□□□□ -0.6
CDK16-222	ENST00000523699	RPP30	P78346	268 aa	Known RBP	11.3	□□□□□ -0.6
CDK16-222	ENST00000523699	ZNF90	Q03938	601 aa		11.3	□□□□□ -0.6
CDK16-222	ENST00000523699	GAMT	Q14353	236 aa		11.3	□□□□□ -0.6
CDK16-222	ENST00000523699	SLIRP	Q9GZT3	109 aa	Known RBP	11.3	□□□□□ -0.6
CDK16-222	ENST00000523699	CELA1	Q9UNI1	258 aa		11.3	□□□□□ -0.6
CDK16-222	ENST00000523699	TEX48	A0A1B0GUV7	120 aa		11.29	□□□□□ -0.6
CDK16-222	ENST00000523699	CFD	P00746	253 aa	Predicted RBP	11.29	□□□□□ -0.6
CDK16-222	ENST00000523699	IGKV3-20	P01619	116 aa		11.29	□□□□□ -0.6
CDK16-222	ENST00000523699	S100A7	P31151	101 aa		11.29	□□□□□ -0.6
CDK16-222	ENST00000523699	TNFSF8	P32971	234 aa		11.29	□□□□□ -0.6
CDK16-222	ENST00000523699	PYDC2	Q56P42	97 aa		11.29	□□□□□ -0.6
CDK16-222	ENST00000523699	TMEM128	Q5BJH2	165 aa		11.29	□□□□□ -0.6
CDK16-222	ENST00000523699	SPATA31B1P	Q5VZV4	182 aa		11.29	□□□□□ -0.6
CDK16-222	ENST00000523699	EBLN2	Q6P2I7	272 aa		11.29	□□□□□ -0.6
CDK16-222	ENST00000523699	ZNF767P	Q75MW2	155 aa		11.29	□□□□□ -0.6
CDK16-222	ENST00000523699	OR8I2	Q8N0Y5	310 aa		11.29	□□□□□ -0.6
CDK16-222	ENST00000523699	TOMM5	Q8N4H5	51 aa		11.29	□□□□□ -0.6
CDK16-222	ENST00000523699	CIB3	Q96Q77	187 aa	Predicted RBP	11.29	□□□□□ -0.6
CDK16-222	ENST00000523699	NDUFAF3	Q9BU61	184 aa		11.29	□□□□□ -0.6
CDK16-222	ENST00000523699	SAV1	Q9H4B6	383 aa	Predicted RBP	11.29	□□□□□ -0.6
CDK16-222	ENST00000523699	IGHV3OR16-12	A0A075B7B8	117 aa		11.28	□□□□□ -0.6
CDK16-222	ENST00000523699	SMIM9	A6NGZ8	99 aa		11.28	□□□□□ -0.6
CDK16-222	ENST00000523699		H3BMQ9	156 aa		11.28	□□□□□ -0.6
CDK16-222	ENST00000523699	SPART-AS1	P0CW21	52 aa		11.28	□□□□□ -0.6
CDK16-222	ENST00000523699		P0DMU3	169 aa		11.28	□□□□□ -0.6
CDK16-222	ENST00000523699	FAM231A	P0DMU4	169 aa		11.28	□□□□□ -0.6
CDK16-222	ENST00000523699	FAM231C	P0DMU5	169 aa		11.28	□□□□□ -0.6
CDK16-222	ENST00000523699	IAPP	P10997	89 aa		11.28	□□□□□ -0.6
CDK16-222	ENST00000523699	MEOX2	P50222	304 aa		11.28	□□□□□ -0.6
CDK16-222	ENST00000523699	OR2F1	Q13607	317 aa		11.28	□□□□□ -0.6
CDK16-222	ENST00000523699	C12orf74	Q32Q52	190 aa		11.28	□□□□□ -0.6
CDK16-222	ENST00000523699	OR4B1	Q8NGF8	309 aa		11.28	□□□□□ -0.6
CDK16-222	ENST00000523699	NEU1	Q99519	415 aa		11.28	□□□□□ -0.6
CDK16-222	ENST00000523699	TRGV9	Q99603	122 aa		11.28	□□□□□ -0.6
CDK16-222	ENST00000523699	RFNG	Q9Y644	331 aa		11.28	□□□□□ -0.6
CDK16-222	ENST00000523699	KMT2A	Q03164	3969 aa		11.27	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 62 ms