RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 USMG5Q96IX5 58 aa7.24□□□□□ -1.25
SDCBP-212ENST00000523483 CITED2Q99967 270 aaPredicted RBP7.24□□□□□ -1.25
SDCBP-212ENST00000523483 PLA2G2EQ9NZK7 142 aa7.24□□□□□ -1.25
SDCBP-212ENST00000523483 TRBV7-1A0A0A6YYK4 115 aa7.24□□□□□ -1.25
SDCBP-212ENST00000523483 F8W735 103 aaPredicted RBP7.24□□□□□ -1.25
SDCBP-212ENST00000523483 TGOLN2O43493 480 aa7.24□□□□□ -1.25
SDCBP-212ENST00000523483 CRIP2P52943 208 aaPredicted RBP7.24□□□□□ -1.25
SDCBP-212ENST00000523483 CFHR3Q02985 330 aa7.24□□□□□ -1.25
SDCBP-212ENST00000523483 RPEL1Q2QD12 228 aa7.24□□□□□ -1.25
SDCBP-212ENST00000523483 SPATA31B1PQ5VZV4 182 aa7.24□□□□□ -1.25
SDCBP-212ENST00000523483 C8orf86Q6ZUL3 223 aa7.24□□□□□ -1.25
SDCBP-212ENST00000523483 ZNF767PQ75MW2 155 aa7.24□□□□□ -1.25
SDCBP-212ENST00000523483 VN1R17PQ8TDU5 208 aa7.24□□□□□ -1.25
SDCBP-212ENST00000523483 DPF1Q92782 380 aa7.24□□□□□ -1.25
SDCBP-212ENST00000523483 RCC1LQ96I51 464 aaKnown RBP7.24□□□□□ -1.25
SDCBP-212ENST00000523483 SEPSECSQ9HD40 501 aaKnown RBP7.24□□□□□ -1.25
SDCBP-212ENST00000523483 KCNIP2Q9NS61 270 aa7.24□□□□□ -1.25
SDCBP-212ENST00000523483 SLC45A2Q9UMX9 530 aa7.24□□□□□ -1.25
SDCBP-212ENST00000523483 IGKV3-7A0A075B6H7 116 aa7.23□□□□□ -1.25
SDCBP-212ENST00000523483 OR7C2O60412 319 aa7.23□□□□□ -1.25
SDCBP-212ENST00000523483 HSPB1P04792 205 aaKnown RBP7.23□□□□□ -1.25
SDCBP-212ENST00000523483 ELANEP08246 267 aa7.23□□□□□ -1.25
SDCBP-212ENST00000523483 M6PRP20645 277 aa7.23□□□□□ -1.25
SDCBP-212ENST00000523483 FOXE3Q13461 319 aa7.23□□□□□ -1.25
SDCBP-212ENST00000523483 PHYHIPLQ96FC7 376 aa7.23□□□□□ -1.25
SDCBP-212ENST00000523483 ARV1Q9H2C2 271 aa7.23□□□□□ -1.25
SDCBP-212ENST00000523483 CLPSL1A2RUU4 121 aa7.23□□□□□ -1.25
SDCBP-212ENST00000523483 H2AFB1P0C5Y9 115 aa7.23□□□□□ -1.25
SDCBP-212ENST00000523483 TCTEX1D4Q5JR98 221 aa7.23□□□□□ -1.25
SDCBP-212ENST00000523483 Q8N2B8 174 aa7.23□□□□□ -1.25
SDCBP-212ENST00000523483 RPP25LQ8N5L8 163 aaKnown RBP7.23□□□□□ -1.25
SDCBP-212ENST00000523483 TRAV30A0A087WSZ9 112 aa7.23□□□□□ -1.25
SDCBP-212ENST00000523483 H3BTX0 84 aa7.23□□□□□ -1.25
SDCBP-212ENST00000523483 FABP1P07148 127 aa7.23□□□□□ -1.25
SDCBP-212ENST00000523483 FCGR2BP31994 310 aaPredicted RBP7.23□□□□□ -1.25
SDCBP-212ENST00000523483 RPL29P47914 159 aaKnown RBP7.23□□□□□ -1.25
SDCBP-212ENST00000523483 CDC34P49427 236 aaPredicted RBP7.23□□□□□ -1.25
SDCBP-212ENST00000523483 SELENOTP62341 195 aa7.23□□□□□ -1.25
SDCBP-212ENST00000523483 SERF2P84101 59 aa7.23□□□□□ -1.25
SDCBP-212ENST00000523483 PXDC1Q5TGL8 231 aa7.23□□□□□ -1.25
SDCBP-212ENST00000523483 C10orf113Q5VZT2 155 aa7.23□□□□□ -1.25
SDCBP-212ENST00000523483 RNF125Q96EQ8 232 aa7.23□□□□□ -1.25
SDCBP-212ENST00000523483 TRGV9Q99603 122 aa7.23□□□□□ -1.25
SDCBP-212ENST00000523483 PSMG3Q9BT73 122 aaPredicted RBP7.23□□□□□ -1.25
SDCBP-212ENST00000523483 PEF1Q9UBV8 284 aaKnown RBP7.23□□□□□ -1.25
SDCBP-212ENST00000523483 TRAV5A0A0B4J249 113 aa7.22□□□□□ -1.25
SDCBP-212ENST00000523483 H3BUA1 57 aa7.22□□□□□ -1.25
SDCBP-212ENST00000523483 HYPMO75409 117 aa7.22□□□□□ -1.25
SDCBP-212ENST00000523483 OR10J4P0C629 311 aa7.22□□□□□ -1.25
SDCBP-212ENST00000523483 PRB4P10163 310 aaPredicted RBP7.22□□□□□ -1.25
SDCBP-212ENST00000523483 TMEM41BQ5BJD5 291 aa7.22□□□□□ -1.25
SDCBP-212ENST00000523483 LINC00305Q7Z4B0 112 aa7.22□□□□□ -1.25
SDCBP-212ENST00000523483 ZNF491Q8N8L2 437 aa7.22□□□□□ -1.25
SDCBP-212ENST00000523483 THAP8Q8NA92 274 aa7.22□□□□□ -1.25
SDCBP-212ENST00000523483 OR11H1Q8NG94 326 aa7.22□□□□□ -1.25
SDCBP-212ENST00000523483 RAB24Q969Q5 203 aa7.22□□□□□ -1.25
SDCBP-212ENST00000523483 SORL1Q92673 2214 aa7.22□□□□□ -1.25
SDCBP-212ENST00000523483 UMAD1C9J7I0 102 aa7.22□□□□□ -1.25
SDCBP-212ENST00000523483 FNDC10F2Z333 226 aa7.22□□□□□ -1.25
SDCBP-212ENST00000523483 SULT1A2P50226 295 aa7.22□□□□□ -1.25
SDCBP-212ENST00000523483 RPL11P62913 178 aaKnown RBP7.22□□□□□ -1.25
SDCBP-212ENST00000523483 PVRIGQ6DKI7 326 aa7.22□□□□□ -1.25
SDCBP-212ENST00000523483 MIR17HGQ75NE6 70 aa7.22□□□□□ -1.25
SDCBP-212ENST00000523483 TMEM37Q8WXS4 190 aa7.22□□□□□ -1.25
SDCBP-212ENST00000523483 DNAJC4Q9NNZ3 241 aa7.22□□□□□ -1.25
SDCBP-212ENST00000523483 GAR1Q9NY12 217 aaKnown RBP7.22□□□□□ -1.25
SDCBP-212ENST00000523483 SYNJ2BPP57105 145 aa7.21□□□□□ -1.25
SDCBP-212ENST00000523483 RPL15P61313 204 aaKnown RBP7.21□□□□□ -1.25
SDCBP-212ENST00000523483 KIAA0141Q14154 515 aaPredicted RBP7.21□□□□□ -1.25
SDCBP-212ENST00000523483 USF2Q15853 346 aaPredicted RBP7.21□□□□□ -1.25
SDCBP-212ENST00000523483 TOMM20LQ6UXN7 152 aa7.21□□□□□ -1.25
SDCBP-212ENST00000523483 UNQ9165/PRO28630Q6UXU0 137 aa7.21□□□□□ -1.25
SDCBP-212ENST00000523483 SSX7Q7RTT5 188 aa7.21□□□□□ -1.25
SDCBP-212ENST00000523483 ACTR3CQ9C0K3 210 aaPredicted RBP7.21□□□□□ -1.25
SDCBP-212ENST00000523483 TMPRSS5Q9H3S3 457 aa7.21□□□□□ -1.25
SDCBP-212ENST00000523483 IGHV4OR15-8A0A075B7B6 117 aa7.21□□□□□ -1.26
SDCBP-212ENST00000523483 A0A087WW49 117 aa7.21□□□□□ -1.26
SDCBP-212ENST00000523483 MAP1LC3B2A6NCE7 125 aa7.21□□□□□ -1.26
SDCBP-212ENST00000523483 MBP02144 154 aa7.21□□□□□ -1.26
SDCBP-212ENST00000523483 NMBP08949 121 aa7.21□□□□□ -1.26
SDCBP-212ENST00000523483 PRR20EP86478 221 aa7.21□□□□□ -1.26
SDCBP-212ENST00000523483 PRR20CP86479 221 aa7.21□□□□□ -1.26
SDCBP-212ENST00000523483 PRR20DP86480 221 aa7.21□□□□□ -1.26
SDCBP-212ENST00000523483 PRR20BP86481 221 aa7.21□□□□□ -1.26
SDCBP-212ENST00000523483 PRR20AP86496 221 aa7.21□□□□□ -1.26
SDCBP-212ENST00000523483 MORN5Q5VZ52 161 aa7.21□□□□□ -1.26
SDCBP-212ENST00000523483 ZNF600Q6ZNG1 722 aa7.21□□□□□ -1.26
SDCBP-212ENST00000523483 SCRT1Q9BWW7 348 aa7.21□□□□□ -1.26
SDCBP-212ENST00000523483 MAP1LC3BQ9GZQ8 125 aa7.21□□□□□ -1.26
SDCBP-212ENST00000523483 HIGD1AQ9Y241 93 aa7.21□□□□□ -1.26
SDCBP-212ENST00000523483 TIMM9Q9Y5J7 89 aa7.21□□□□□ -1.26
SDCBP-212ENST00000523483 CEBPGP53567 150 aa7.21□□□□□ -1.26
SDCBP-212ENST00000523483 RHOBP62745 196 aa7.21□□□□□ -1.26
SDCBP-212ENST00000523483 RELQ04864 619 aaPredicted RBP7.21□□□□□ -1.26
SDCBP-212ENST00000523483 UBE2E2Q96LR5 201 aa7.21□□□□□ -1.26
SDCBP-212ENST00000523483 CITED4Q96RK1 184 aa7.21□□□□□ -1.26
SDCBP-212ENST00000523483 FBN1P35555 2871 aaKnown RBP7.21□□□□□ -1.26
SDCBP-212ENST00000523483 BMPR1BO00238 502 aa7.2□□□□□ -1.26
SDCBP-212ENST00000523483 GGCTO75223 188 aaKnown RBP7.2□□□□□ -1.26
SDCBP-212ENST00000523483 SLURP1P55000 103 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms