RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 FABP1P07148 127 aa20.38■□□□□ 0.85
COL13A1-214ENST00000522165 RD3LP0DJH9 198 aa20.38■□□□□ 0.85
COL13A1-214ENST00000522165 SRSF1Q07955 248 aaKnown RBP eCLIP20.38■□□□□ 0.85
COL13A1-214ENST00000522165 TEX38Q6PEX7 206 aa20.37■□□□□ 0.85
COL13A1-214ENST00000522165 SPG11Q96JI7 2443 aa20.37■□□□□ 0.85
COL13A1-214ENST00000522165 IGHV1-69DA0A0B4J2H0 117 aa20.36■□□□□ 0.85
COL13A1-214ENST00000522165 IGHV1-69P01742 117 aa20.36■□□□□ 0.85
COL13A1-214ENST00000522165 CENPWQ5EE01 88 aa20.36■□□□□ 0.85
COL13A1-214ENST00000522165 ZNF329Q86UD4 541 aa20.36■□□□□ 0.85
COL13A1-214ENST00000522165 NRGNQ92686 78 aa20.36■□□□□ 0.85
COL13A1-214ENST00000522165 HSPB9Q9BQS6 159 aa20.36■□□□□ 0.85
COL13A1-214ENST00000522165 GGCTO75223 188 aaKnown RBP20.36■□□□□ 0.85
COL13A1-214ENST00000522165 GP9P14770 177 aa20.36■□□□□ 0.85
COL13A1-214ENST00000522165 GNG4P50150 75 aa20.36■□□□□ 0.85
COL13A1-214ENST00000522165 ZNF48Q96MX3 618 aaPredicted RBP20.35■□□□□ 0.85
COL13A1-214ENST00000522165 IMMP2LQ96T52 175 aa20.35■□□□□ 0.85
COL13A1-214ENST00000522165 MRPL27Q9P0M9 148 aaKnown RBP20.35■□□□□ 0.85
COL13A1-214ENST00000522165 IGHV3OR16-10A0A075B7F0 116 aa20.34■□□□□ 0.85
COL13A1-214ENST00000522165 A0A1W2PPQ1 181 aa20.34■□□□□ 0.85
COL13A1-214ENST00000522165 UBE2CO00762 179 aa20.34■□□□□ 0.85
COL13A1-214ENST00000522165 MYCNOSP40205 109 aa20.34■□□□□ 0.85
COL13A1-214ENST00000522165 KCNIP4Q6PIL6 250 aa20.34■□□□□ 0.85
COL13A1-214ENST00000522165 SRD5A3Q9H8P0 318 aa20.34■□□□□ 0.85
COL13A1-214ENST00000522165 S4R3C0 116 aa20.34■□□□□ 0.85
COL13A1-214ENST00000522165 AP4M1O00189 453 aa20.34■□□□□ 0.85
COL13A1-214ENST00000522165 TOMM40O96008 361 aa20.34■□□□□ 0.85
COL13A1-214ENST00000522165 COX6B1P14854 86 aa20.34■□□□□ 0.85
COL13A1-214ENST00000522165 PAX1P15863 534 aa20.34■□□□□ 0.85
COL13A1-214ENST00000522165 MFAP4P55083 255 aa20.34■□□□□ 0.85
COL13A1-214ENST00000522165 CLEC12BQ2HXU8 276 aa20.34■□□□□ 0.85
COL13A1-214ENST00000522165 LEMD1Q68G75 181 aa20.34■□□□□ 0.85
COL13A1-214ENST00000522165 OR10G8Q8NGN5 311 aa20.34■□□□□ 0.85
COL13A1-214ENST00000522165 SLC25A39Q9BZJ4 359 aaPredicted RBP20.34■□□□□ 0.85
COL13A1-214ENST00000522165 UTP20O75691 2785 aaKnown RBP20.34■□□□□ 0.85
COL13A1-214ENST00000522165 SNRPCP09234 159 aaKnown RBP20.33■□□□□ 0.85
COL13A1-214ENST00000522165 THYN1Q9P016 225 aa20.33■□□□□ 0.85
COL13A1-214ENST00000522165 TRAV30A0A087WSZ9 112 aa20.33■□□□□ 0.84
COL13A1-214ENST00000522165 NBEAP1P0C6P0 100 aa20.33■□□□□ 0.84
COL13A1-214ENST00000522165 AKR1D1P51857 326 aa20.33■□□□□ 0.84
COL13A1-214ENST00000522165 SGMS2Q8NHU3 365 aa20.33■□□□□ 0.84
COL13A1-214ENST00000522165 BLNKQ8WV28 456 aa20.33■□□□□ 0.84
COL13A1-214ENST00000522165 UBR5O95071 2799 aaPredicted RBP20.32■□□□□ 0.84
COL13A1-214ENST00000522165 TRAV40A0A0B4J280 105 aa20.32■□□□□ 0.84
COL13A1-214ENST00000522165 PHOX2AO14813 284 aa20.32■□□□□ 0.84
COL13A1-214ENST00000522165 GNG7O60262 68 aa20.32■□□□□ 0.84
COL13A1-214ENST00000522165 DSCR9P59020 149 aa20.32■□□□□ 0.84
COL13A1-214ENST00000522165 IGF2BP2-AS1Q96M15 143 aa20.32■□□□□ 0.84
COL13A1-214ENST00000522165 TCEAL7Q9BRU2 100 aa20.32■□□□□ 0.84
COL13A1-214ENST00000522165 F8W735 103 aaPredicted RBP20.31■□□□□ 0.84
COL13A1-214ENST00000522165 NDUFB8O95169 186 aa20.31■□□□□ 0.84
COL13A1-214ENST00000522165 FAM3BP58499 235 aaPredicted RBP20.31■□□□□ 0.84
COL13A1-214ENST00000522165 YPEL3P61236 119 aaPredicted RBP20.31■□□□□ 0.84
COL13A1-214ENST00000522165 RANP62826 216 aaKnown RBP20.31■□□□□ 0.84
COL13A1-214ENST00000522165 FABP9Q0Z7S8 132 aa20.31■□□□□ 0.84
COL13A1-214ENST00000522165 FOXL1Q12952 345 aa20.31■□□□□ 0.84
COL13A1-214ENST00000522165 SVEP1Q4LDE5 3571 aa20.31■□□□□ 0.84
COL13A1-214ENST00000522165 VPS13CQ709C8 3753 aa20.31■□□□□ 0.84
COL13A1-214ENST00000522165 PPP5D1E7EU14 171 aa20.31■□□□□ 0.84
COL13A1-214ENST00000522165 HIST1H2BKO60814 126 aa20.31■□□□□ 0.84
COL13A1-214ENST00000522165 HIST1H2BJP06899 126 aa20.31■□□□□ 0.84
COL13A1-214ENST00000522165 MSMBP08118 114 aa20.31■□□□□ 0.84
COL13A1-214ENST00000522165 HIST1H2BOP23527 126 aa20.31■□□□□ 0.84
COL13A1-214ENST00000522165 HIST1H2BBP33778 126 aa20.31■□□□□ 0.84
COL13A1-214ENST00000522165 HIST1H2BDP58876 126 aa20.31■□□□□ 0.84
COL13A1-214ENST00000522165 HIST1H2BCP62807 126 aa20.31■□□□□ 0.84
COL13A1-214ENST00000522165 HIST2H2BEQ16778 126 aa20.31■□□□□ 0.84
COL13A1-214ENST00000522165 HIST2H2BFQ5QNW6 126 aaPredicted RBP20.31■□□□□ 0.84
COL13A1-214ENST00000522165 BRD3OSQ6XYD6 125 aa20.31■□□□□ 0.84
COL13A1-214ENST00000522165 ZNF491Q8N8L2 437 aa20.31■□□□□ 0.84
COL13A1-214ENST00000522165 HIST1H2BHQ93079 126 aa20.31■□□□□ 0.84
COL13A1-214ENST00000522165 HIST1H2BNQ99877 126 aa20.31■□□□□ 0.84
COL13A1-214ENST00000522165 HIST1H2BMQ99879 126 aa20.31■□□□□ 0.84
COL13A1-214ENST00000522165 C21orf62Q9NYP8 219 aa20.31■□□□□ 0.84
COL13A1-214ENST00000522165 PEX7O00628 323 aa20.3■□□□□ 0.84
COL13A1-214ENST00000522165 OR2J3O76001 311 aa20.3■□□□□ 0.84
COL13A1-214ENST00000522165 TAS2R60P59551 318 aa20.3■□□□□ 0.84
COL13A1-214ENST00000522165 FAM110DQ8TAY7 271 aaPredicted RBP20.3■□□□□ 0.84
COL13A1-214ENST00000522165 FRZBQ92765 325 aa20.3■□□□□ 0.84
COL13A1-214ENST00000522165 TMEM14CQ9P0S9 112 aa20.3■□□□□ 0.84
COL13A1-214ENST00000522165 CDC42EP3Q9UKI2 254 aa20.3■□□□□ 0.84
COL13A1-214ENST00000522165 IGLV2-8P01709 118 aa20.3■□□□□ 0.84
COL13A1-214ENST00000522165 TYMSP04818 313 aa20.3■□□□□ 0.84
COL13A1-214ENST00000522165 OR5I1Q13606 314 aa20.3■□□□□ 0.84
COL13A1-214ENST00000522165 ZNF600Q6ZNG1 722 aa20.3■□□□□ 0.84
COL13A1-214ENST00000522165 RNF125Q96EQ8 232 aa20.3■□□□□ 0.84
COL13A1-214ENST00000522165 WI2-2373I1.2A0A1W2PRP0 233 aa20.29■□□□□ 0.84
COL13A1-214ENST00000522165 ATP6V0E1O15342 81 aa20.29■□□□□ 0.84
COL13A1-214ENST00000522165 C5orf56Q8N8D9 126 aa20.29■□□□□ 0.84
COL13A1-214ENST00000522165 IGHV4-38-2P0DP08 117 aa20.28■□□□□ 0.84
COL13A1-214ENST00000522165 CNN1P51911 297 aaKnown RBP20.28■□□□□ 0.84
COL13A1-214ENST00000522165 Q56UQ5 140 aa20.28■□□□□ 0.84
COL13A1-214ENST00000522165 UNQ5815/PRO19632Q6UWF5 114 aa20.28■□□□□ 0.84
COL13A1-214ENST00000522165 LINC00479Q96M42 142 aa20.28■□□□□ 0.84
COL13A1-214ENST00000522165 SHANK2-AS3Q9BTD1 123 aa20.28■□□□□ 0.84
COL13A1-214ENST00000522165 TMUB1Q9BVT8 246 aa20.28■□□□□ 0.84
COL13A1-214ENST00000522165 EPG5Q9HCE0 2579 aa20.28■□□□□ 0.84
COL13A1-214ENST00000522165 A1L4Q6 167 aa20.28■□□□□ 0.84
COL13A1-214ENST00000522165 IL4P05112 153 aa20.28■□□□□ 0.84
COL13A1-214ENST00000522165 TRGC1P0CF51 173 aa20.28■□□□□ 0.84
COL13A1-214ENST00000522165 HIST1H1BP16401 226 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms