RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 TRIM16LQ309B1 348 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 C12orf54Q6X4T0 127 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 SSX9Q7RTT3 188 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 H2BFWTQ7Z2G1 175 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 SLC35E3Q7Z769 313 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 LYG2Q86SG7 212 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 ZNF695Q8IW36 515 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 VKORC1L1Q8N0U8 176 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 LGI3Q8N145 548 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 CENPSQ8N2Z9 138 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 STPG2Q8N412 459 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 COMMD1Q8N668 190 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 SGMS2Q8NHU3 365 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 TYMSOSQ8TAI1 123 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 ENKURQ8TC29 256 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 CASTOR1Q8WTX7 329 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 ARPC1AQ92747 370 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 RBPMSQ93062 196 aaKnown RBP2.38□□□□□ -2.03
VPS13B-209ENST00000521559 IL22RA2Q969J5 263 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 GPR146Q96CH1 333 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 SEC22AQ96IW7 307 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 RAB40CQ96S21 281 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 CLCC1Q96S66 551 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 HSPB9Q9BQS6 159 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 MARVELD1Q9BSK0 173 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 GON7Q9BXV9 100 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 C20orf85Q9H1P6 137 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 ZNF430Q9H8G1 570 aaPredicted RBP2.38□□□□□ -2.03
VPS13B-209ENST00000521559 FKBP11Q9NYL4 201 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 SHPKQ9UHJ6 478 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 PRNDQ9UKY0 176 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 NUBP2Q9Y5Y2 271 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 ITPR3Q14573 2671 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 ARHGAP32A7KAX9 2087 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 OTOGQ6ZRI0 2925 aa2.38□□□□□ -2.03
VPS13B-209ENST00000521559 HIVEP1P15822 2718 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 CENPEQ02224 2701 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 ABCA2Q9BZC7 2435 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 CSMD2Q7Z408 3487 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 TRAV41A0A0B4J266 112 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 A0A0G2JRQ6 117 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 A0A0U1RRA0 63 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 TEX50A0A1B0GTY4 177 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 A0A1B0GW64 132 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 DUXBA0A1W2PPF3 345 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 PSMB11A5LHX3 300 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 SNRPGP15A8MWD9 76 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 INMT-MINDY4F8WBC2 141 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 G3V318 75 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 BRI3O95415 125 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 PTTG1O95997 202 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 DHFRP00374 187 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 IGHG4P01861 327 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 OR4E1P0C645 316 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 OR9G9P0C7N8 305 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 TRAPPC2P0DI81 140 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 TRAPPC2BP0DI82 140 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 SLC25A6P12236 298 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 SPNP16150 400 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 VDAC1P21796 283 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 RPL27AP46776 148 aaKnown RBP2.37□□□□□ -2.03
VPS13B-209ENST00000521559 AKR1C2P52895 323 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 OR2B8PP59922 312 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 HSPE1P61604 102 aaKnown RBP2.37□□□□□ -2.03
VPS13B-209ENST00000521559 SLC35B1P78383 322 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 NDPQ00604 133 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 DHRS2Q13268 280 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 TNXAQ16473 311 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 ANKRD55Q3KP44 614 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 AKIRIN2Q53H80 203 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 NMSQ5H8A3 153 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 C10orf55Q5SWW7 151 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 THOC7Q6I9Y2 204 aaKnown RBP2.37□□□□□ -2.03
VPS13B-209ENST00000521559 PLET1Q6UQ28 207 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 UNQ5815/PRO19632Q6UWF5 114 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 Q6ZRG5 221 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 LYZL2Q7Z4W2 148 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 ZNF429Q86V71 674 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 LINC00518Q8N0U6 118 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 SLC35G3Q8N808 338 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 C3orf56Q8N813 242 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 MINDY2Q8NBR6 621 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 OR5AU1Q8NGC0 362 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 OR52B4Q8NGK2 314 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 OR1L8Q8NGR8 309 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 OR5B3Q8NH48 314 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 OR52E5Q8NH55 327 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 COQ8AQ8NI60 647 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 RNASE11Q8TAA1 199 aaKnown RBP2.37□□□□□ -2.03
VPS13B-209ENST00000521559 GRPEL2Q8TAA5 225 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 LHFPL5Q8TAF8 219 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 ZNF431Q8TF32 576 aaPredicted RBP2.37□□□□□ -2.03
VPS13B-209ENST00000521559 MITD1Q8WV92 249 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 LSM10Q969L4 123 aaKnown RBP2.37□□□□□ -2.03
VPS13B-209ENST00000521559 NOL4LQ96MY1 436 aaPredicted RBP2.37□□□□□ -2.03
VPS13B-209ENST00000521559 RCHY1Q96PM5 261 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 SPIN2AQ99865 258 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 SPIN2BQ9BPZ2 258 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 SEC22CQ9BRL7 303 aa2.37□□□□□ -2.03
VPS13B-209ENST00000521559 COMMD5Q9GZQ3 224 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms