RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 SCGB1D2O95969 90 aa15.33■□□□□ 0.04
TRIM35-203ENST00000521253 HNRNPCP07910 306 aaKnown RBP eCLIP15.33■□□□□ 0.04
TRIM35-203ENST00000521253 ZNF90Q03938 601 aa15.33■□□□□ 0.04
TRIM35-203ENST00000521253 WFDC3Q8IUB2 231 aa15.33■□□□□ 0.04
TRIM35-203ENST00000521253 PSENENQ9NZ42 101 aa15.33■□□□□ 0.04
TRIM35-203ENST00000521253 APRG1Q8IVJ8 170 aa15.32■□□□□ 0.04
TRIM35-203ENST00000521253 C12orf45Q8N5I9 185 aaPredicted RBP15.32■□□□□ 0.04
TRIM35-203ENST00000521253 OR51G1Q8NGK1 321 aa15.32■□□□□ 0.04
TRIM35-203ENST00000521253 SMIM8Q96KF7 97 aa15.32■□□□□ 0.04
TRIM35-203ENST00000521253 IGKV1OR2-108A0A075B7D4 117 aa15.31■□□□□ 0.04
TRIM35-203ENST00000521253 DNASE2O00115 360 aaPredicted RBP15.31■□□□□ 0.04
TRIM35-203ENST00000521253 PAX9P55771 341 aa15.31■□□□□ 0.04
TRIM35-203ENST00000521253 THAP8Q8NA92 274 aa15.31■□□□□ 0.04
TRIM35-203ENST00000521253 ENKURQ8TC29 256 aa15.31■□□□□ 0.04
TRIM35-203ENST00000521253 RNF125Q96EQ8 232 aa15.31■□□□□ 0.04
TRIM35-203ENST00000521253 GRAMD2BQ96HH9 432 aa15.31■□□□□ 0.04
TRIM35-203ENST00000521253 TRGV9Q99603 122 aa15.31■□□□□ 0.04
TRIM35-203ENST00000521253 TRAV2A0A0B4J234 112 aa15.3■□□□□ 0.04
TRIM35-203ENST00000521253 FAM25EA8MYX2 175 aa15.3■□□□□ 0.04
TRIM35-203ENST00000521253 MBPP02686 304 aaPredicted RBP15.3■□□□□ 0.04
TRIM35-203ENST00000521253 CMC4P56277 68 aaPredicted RBP15.3■□□□□ 0.04
TRIM35-203ENST00000521253 ZNF124Q15973 351 aa15.3■□□□□ 0.04
TRIM35-203ENST00000521253 C16orf54Q6UWD8 224 aa15.3■□□□□ 0.04
TRIM35-203ENST00000521253 ACOT7LQ6ZUV0 252 aa15.3■□□□□ 0.04
TRIM35-203ENST00000521253 GLMPQ8WWB7 406 aa15.3■□□□□ 0.04
TRIM35-203ENST00000521253 RAB40CQ96S21 281 aa15.3■□□□□ 0.04
TRIM35-203ENST00000521253 MAP6D1Q9H9H5 199 aa15.3■□□□□ 0.04
TRIM35-203ENST00000521253 RABAC1Q9UI14 185 aa15.3■□□□□ 0.04
TRIM35-203ENST00000521253 RCL1Q9Y2P8 373 aaKnown RBP15.3■□□□□ 0.04
TRIM35-203ENST00000521253 FABP1P07148 127 aa15.29■□□□□ 0.04
TRIM35-203ENST00000521253 OR2F1Q13607 317 aa15.29■□□□□ 0.04
TRIM35-203ENST00000521253 FAM24BQ8N5W8 94 aa15.29■□□□□ 0.04
TRIM35-203ENST00000521253 STXBP6Q8NFX7 210 aa15.29■□□□□ 0.04
TRIM35-203ENST00000521253 PBDC1Q9BVG4 233 aa15.29■□□□□ 0.04
TRIM35-203ENST00000521253 C5orf51A6NDU8 294 aa15.28■□□□□ 0.04
TRIM35-203ENST00000521253 PMS2P5A8MQ11 134 aa15.28■□□□□ 0.04
TRIM35-203ENST00000521253 BUB3O43684 328 aa15.28■□□□□ 0.04
TRIM35-203ENST00000521253 CCNKO75909 580 aa15.28■□□□□ 0.04
TRIM35-203ENST00000521253 IL5P05113 134 aa15.28■□□□□ 0.04
TRIM35-203ENST00000521253 OR8G2PQ6IF36 304 aa15.28■□□□□ 0.04
TRIM35-203ENST00000521253 TMEM14EPQ6UXP3 125 aa15.28■□□□□ 0.04
TRIM35-203ENST00000521253 NRARPQ7Z6K4 114 aa15.28■□□□□ 0.04
TRIM35-203ENST00000521253 EDA2RQ9HAV5 297 aa15.28■□□□□ 0.04
TRIM35-203ENST00000521253 HELTA6NFD8 242 aa15.27■□□□□ 0.04
TRIM35-203ENST00000521253 SNRPGP15A8MWD9 76 aa15.27■□□□□ 0.04
TRIM35-203ENST00000521253 K7EQG2 157 aa15.27■□□□□ 0.04
TRIM35-203ENST00000521253 RPL35AP18077 110 aaKnown RBP15.27■□□□□ 0.04
TRIM35-203ENST00000521253 EIF2B2P49770 351 aaKnown RBP15.27■□□□□ 0.04
TRIM35-203ENST00000521253 TAS2R30P59541 319 aa15.27■□□□□ 0.04
TRIM35-203ENST00000521253 LYZP61626 148 aa15.27■□□□□ 0.04
TRIM35-203ENST00000521253 AKR1C1Q04828 323 aa15.27■□□□□ 0.04
TRIM35-203ENST00000521253 C7orf66A4D0T2 115 aa15.26■□□□□ 0.03
TRIM35-203ENST00000521253 TSC22D2O75157 780 aa15.26■□□□□ 0.03
TRIM35-203ENST00000521253 METTL15P1P0C7V9 234 aa15.26■□□□□ 0.03
TRIM35-203ENST00000521253 APOC4P55056 127 aa15.26■□□□□ 0.03
TRIM35-203ENST00000521253 DEFB131AP59861 70 aa15.26■□□□□ 0.03
TRIM35-203ENST00000521253 DCANP1Q8TF63 244 aa15.26■□□□□ 0.03
TRIM35-203ENST00000521253 C2orf50Q96LR7 162 aa15.26■□□□□ 0.03
TRIM35-203ENST00000521253 KMT2CQ8NEZ4 4911 aaKnown RBP15.25■□□□□ 0.03
TRIM35-203ENST00000521253 SMCO3A2RU48 225 aa15.25■□□□□ 0.03
TRIM35-203ENST00000521253 AP2S1P53680 142 aaPredicted RBP15.25■□□□□ 0.03
TRIM35-203ENST00000521253 LEMD1Q68G75 181 aa15.25■□□□□ 0.03
TRIM35-203ENST00000521253 STPG3Q8N7X2 389 aa15.25■□□□□ 0.03
TRIM35-203ENST00000521253 LSM5Q9Y4Y9 91 aaKnown RBP15.25■□□□□ 0.03
TRIM35-203ENST00000521253 KIR2DL5BA0A0G2JN68 375 aa15.24■□□□□ 0.03
TRIM35-203ENST00000521253 KIR2DL5BA0A0G2JPC4 375 aa15.24■□□□□ 0.03
TRIM35-203ENST00000521253 K7EPK0 472 aa15.24■□□□□ 0.03
TRIM35-203ENST00000521253 NUP62P37198 522 aaPredicted RBP15.24■□□□□ 0.03
TRIM35-203ENST00000521253 RRAS2P62070 204 aaPredicted RBP15.24■□□□□ 0.03
TRIM35-203ENST00000521253 GSG1LQ6UXU4 331 aa15.24■□□□□ 0.03
TRIM35-203ENST00000521253 SIGLEC15Q6ZMC9 328 aa15.24■□□□□ 0.03
TRIM35-203ENST00000521253 TMEM182Q6ZP80 229 aaPredicted RBP15.24■□□□□ 0.03
TRIM35-203ENST00000521253 TMEM144Q7Z5S9 345 aa15.24■□□□□ 0.03
TRIM35-203ENST00000521253 KIR2DL5AQ8N109 375 aa15.24■□□□□ 0.03
TRIM35-203ENST00000521253 KIR2DL5BQ8NHK3 375 aa15.24■□□□□ 0.03
TRIM35-203ENST00000521253 MUC7Q8TAX7 377 aa15.24■□□□□ 0.03
TRIM35-203ENST00000521253 GPN1Q9HCN4 374 aaPredicted RBP15.24■□□□□ 0.03
TRIM35-203ENST00000521253 L7N2F9 121 aa15.23■□□□□ 0.03
TRIM35-203ENST00000521253 CFDP00746 253 aaPredicted RBP15.23■□□□□ 0.03
TRIM35-203ENST00000521253 GATA2P23769 480 aaPredicted RBP15.23■□□□□ 0.03
TRIM35-203ENST00000521253 DEFA1P59665 94 aa15.23■□□□□ 0.03
TRIM35-203ENST00000521253 DEFA3P59666 94 aa15.23■□□□□ 0.03
TRIM35-203ENST00000521253 VAMP2P63027 116 aa15.23■□□□□ 0.03
TRIM35-203ENST00000521253 DLK1P80370 383 aa15.23■□□□□ 0.03
TRIM35-203ENST00000521253 OR10P1Q8NGE3 313 aa15.23■□□□□ 0.03
TRIM35-203ENST00000521253 OVOL2Q9BRP0 275 aa15.23■□□□□ 0.03
TRIM35-203ENST00000521253 PFDN2Q9UHV9 154 aa15.23■□□□□ 0.03
TRIM35-203ENST00000521253 INMT-MINDY4F8WBC2 141 aa15.22■□□□□ 0.03
TRIM35-203ENST00000521253 C3orf84H3BNL1 204 aa15.22■□□□□ 0.03
TRIM35-203ENST00000521253 UBE2CO00762 179 aa15.22■□□□□ 0.03
TRIM35-203ENST00000521253 ZNF688P0C7X2 276 aa15.22■□□□□ 0.03
TRIM35-203ENST00000521253 ARL16Q0P5N6 197 aa15.22■□□□□ 0.03
TRIM35-203ENST00000521253 IL15RAQ13261 267 aa15.22■□□□□ 0.03
TRIM35-203ENST00000521253 Q6ZWC4 215 aa15.22■□□□□ 0.03
TRIM35-203ENST00000521253 NRN1Q9NPD7 142 aa15.22■□□□□ 0.03
TRIM35-203ENST00000521253 PRAF2O60831 178 aa15.21■□□□□ 0.03
TRIM35-203ENST00000521253 DEFB135Q30KP9 77 aa15.21■□□□□ 0.03
TRIM35-203ENST00000521253 BPIFCQ8NFQ6 507 aa15.21■□□□□ 0.03
TRIM35-203ENST00000521253 PPP1R14BQ96C90 147 aa15.21■□□□□ 0.03
TRIM35-203ENST00000521253 MARVELD1Q9BSK0 173 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms