RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 SSMEM1Q8WWF3 244 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 ATP6V0BQ99437 205 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 NIPSNAP3BQ9BS92 247 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 TMEM167BQ9NRX6 74 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 THYN1Q9P016 225 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 MOB4Q9Y3A3 225 aa5.7□□□□□ -1.5
MRPS28-205ENST00000519386 IGLV11-55A0A075B6I3 123 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 IGKV1D-37A0A075B6S9 117 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 TRAV30A0A087WSZ9 112 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 A0A087WWC5 75 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 ZFP92A6NM28 416 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 I3L2K1 104 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 BRI3O95415 125 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 ARL14EPLP0DKL9 152 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 MFAP2P55001 183 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 FGF8P55075 233 aaPredicted RBP5.69□□□□□ -1.5
MRPS28-205ENST00000519386 CX3CL1P78423 397 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 FAM90A2PQ658T7 463 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 S100A7AQ86SG5 101 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 CYB561D1Q8N8Q1 229 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 STXBP6Q8NFX7 210 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 SGMS2Q8NHU3 365 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 FAM110DQ8TAY7 271 aaPredicted RBP5.69□□□□□ -1.5
MRPS28-205ENST00000519386 ZNF418Q8TF45 676 aaPredicted RBP5.69□□□□□ -1.5
MRPS28-205ENST00000519386 ABHD5Q8WTS1 349 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 MISP3Q96FF7 219 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 ACY3Q96HD9 319 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 RBM14Q96PK6 669 aaKnown RBP5.69□□□□□ -1.5
MRPS28-205ENST00000519386 TXN2Q99757 166 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 RARRES2Q99969 163 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 RASL11BQ9BPW5 248 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 TUBA4BQ9H853 241 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 ESM1Q9NQ30 184 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 TECRQ9NZ01 308 aaKnown RBP5.69□□□□□ -1.5
MRPS28-205ENST00000519386 PITPNC1Q9UKF7 332 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 RNF24Q9Y225 148 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 PRELID1Q9Y255 219 aa5.69□□□□□ -1.5
MRPS28-205ENST00000519386 IGHV7-81A0A0B4J1V7 117 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 A0A1B0GV50 99 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 DNAJC9-AS1A6NH13 148 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 NCBP2LA6PVI3 153 aaKnown RBP5.68□□□□□ -1.5
MRPS28-205ENST00000519386 K7EIM0 57 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 FCN1O00602 326 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 TCF21O43680 179 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 IGLC1P0CG04 106 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 DEFA4P12838 97 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 GCHFRP30047 84 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 NPBWR1P48145 328 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 HILS1P60008 231 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 CD81P60033 236 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 AWAT1Q58HT5 328 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 GCSAMLQ5JQS6 135 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 FAM78BQ5VT40 261 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 C5orf56Q8N8D9 126 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 VN1R17PQ8TDU5 208 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 RXFP4Q8TDU9 374 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 NPIPB3Q92617 1050 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 C11orf52Q96A22 123 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 DUX5Q96PT3 197 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 SLC25A33Q9BSK2 321 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 WNT10AQ9GZT5 417 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 SEPSECSQ9HD40 501 aaKnown RBP5.68□□□□□ -1.5
MRPS28-205ENST00000519386 DNAJC4Q9NNZ3 241 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 TNFRSF19Q9NS68 423 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 TMEM242Q9NWH2 141 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 GAR1Q9NY12 217 aaKnown RBP5.68□□□□□ -1.5
MRPS28-205ENST00000519386 DMRT1Q9Y5R6 373 aa5.68□□□□□ -1.5
MRPS28-205ENST00000519386 CUBNO60494 3623 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 A0A1W2PRE2 83 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 CXorf65A6NEN9 183 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 C11orf94C9JXX5 98 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 H3BQ15 152 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 H3BUA1 57 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 DNASE2O00115 360 aaPredicted RBP5.67□□□□□ -1.5
MRPS28-205ENST00000519386 COX7A2P2O60397 106 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 REG1AP05451 166 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 C8orf88P0DMB2 117 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 S100A7P31151 101 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 YPEL3P61236 119 aaPredicted RBP5.67□□□□□ -1.5
MRPS28-205ENST00000519386 NDPQ00604 133 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 AKIRIN2Q53H80 203 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 ASPHD1Q5U4P2 390 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 C10orf113Q5VZT2 155 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 ATRAIDQ6UW56 229 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 Q6YL49 198 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 OR2T6Q8NHC8 308 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 TVP23CQ96ET8 276 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 SSX3Q99909 188 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 PRDM13Q9H4Q3 707 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 SMCO4Q9NRQ5 59 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 DOK5Q9P104 306 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 NAT8Q9UHE5 227 aa5.67□□□□□ -1.5
MRPS28-205ENST00000519386 TRBV9A0A0B4J1U6 114 aa5.66□□□□□ -1.5
MRPS28-205ENST00000519386 C7orf77A4D0Y5 90 aa5.66□□□□□ -1.5
MRPS28-205ENST00000519386 FAM74A7A6NL05 159 aa5.66□□□□□ -1.5
MRPS28-205ENST00000519386 HOXA3O43365 443 aaPredicted RBP5.66□□□□□ -1.5
MRPS28-205ENST00000519386 PAGE4O60829 102 aa5.66□□□□□ -1.5
MRPS28-205ENST00000519386 SCO1O75880 301 aa5.66□□□□□ -1.5
MRPS28-205ENST00000519386 OR2C1O95371 312 aa5.66□□□□□ -1.5
MRPS28-205ENST00000519386 TOMM40O96008 361 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms