RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 SCPEP1Q9HB40 452 aa14.22□□□□□ -0.13
SQSTM1-215ENST00000514093 C3orf85A0A1B0GTC6 90 aa14.21□□□□□ -0.13
SQSTM1-215ENST00000514093 ATG12O94817 140 aa14.21□□□□□ -0.13
SQSTM1-215ENST00000514093 TOMM40O96008 361 aa14.21□□□□□ -0.13
SQSTM1-215ENST00000514093 INAFM2P0DMQ5 153 aa14.21□□□□□ -0.13
SQSTM1-215ENST00000514093 CCL18P55774 89 aa14.21□□□□□ -0.13
SQSTM1-215ENST00000514093 RND3P61587 244 aa14.21□□□□□ -0.13
SQSTM1-215ENST00000514093 RNASE11Q8TAA1 199 aaKnown RBP14.21□□□□□ -0.13
SQSTM1-215ENST00000514093 RRNAD1Q96FB5 475 aaKnown RBP14.21□□□□□ -0.13
SQSTM1-215ENST00000514093 PBDC1Q9BVG4 233 aa14.21□□□□□ -0.13
SQSTM1-215ENST00000514093 HEYLQ9NQ87 328 aaPredicted RBP14.21□□□□□ -0.13
SQSTM1-215ENST00000514093 FAT1Q14517 4588 aa14.2□□□□□ -0.14
SQSTM1-215ENST00000514093 ZNF705GA8MUZ8 300 aaPredicted RBP14.2□□□□□ -0.14
SQSTM1-215ENST00000514093 SPCS3P61009 180 aa14.2□□□□□ -0.14
SQSTM1-215ENST00000514093 FCN2Q15485 313 aa14.2□□□□□ -0.14
SQSTM1-215ENST00000514093 EBLN2Q6P2I7 272 aa14.2□□□□□ -0.14
SQSTM1-215ENST00000514093 TMEM170AQ8WVE7 144 aa14.2□□□□□ -0.14
SQSTM1-215ENST00000514093 SOCS3O14543 225 aa14.19□□□□□ -0.14
SQSTM1-215ENST00000514093 RCVRNP35243 200 aa14.19□□□□□ -0.14
SQSTM1-215ENST00000514093 ALDH3B2P48448 385 aa14.19□□□□□ -0.14
SQSTM1-215ENST00000514093 PSMB3P49720 205 aa14.19□□□□□ -0.14
SQSTM1-215ENST00000514093 DLK1P80370 383 aa14.19□□□□□ -0.14
SQSTM1-215ENST00000514093 C2orf83Q53S99 150 aa14.19□□□□□ -0.14
SQSTM1-215ENST00000514093 SNX29P2Q8IUI4 249 aa14.19□□□□□ -0.14
SQSTM1-215ENST00000514093 RNASEH2CQ8TDP1 164 aaKnown RBP14.19□□□□□ -0.14
SQSTM1-215ENST00000514093 GPR146Q96CH1 333 aa14.19□□□□□ -0.14
SQSTM1-215ENST00000514093 KRTAP1-5Q9BYS1 174 aa14.19□□□□□ -0.14
SQSTM1-215ENST00000514093 A0A0J9YX75 114 aa14.18□□□□□ -0.14
SQSTM1-215ENST00000514093 PAX9P55771 341 aa14.18□□□□□ -0.14
SQSTM1-215ENST00000514093 SSX7Q7RTT5 188 aa14.18□□□□□ -0.14
SQSTM1-215ENST00000514093 SLC24A4Q8NFF2 622 aa14.18□□□□□ -0.14
SQSTM1-215ENST00000514093 RNF125Q96EQ8 232 aa14.18□□□□□ -0.14
SQSTM1-215ENST00000514093 Q9H8V8 135 aa14.18□□□□□ -0.14
SQSTM1-215ENST00000514093 LYRM9A8MSI8 78 aa14.17□□□□□ -0.14
SQSTM1-215ENST00000514093 TMEM127O75204 238 aa14.17□□□□□ -0.14
SQSTM1-215ENST00000514093 ELK1P19419 428 aa14.17□□□□□ -0.14
SQSTM1-215ENST00000514093 RPS19P39019 145 aaKnown RBP14.17□□□□□ -0.14
SQSTM1-215ENST00000514093 SPATA31B1PQ5VZV4 182 aa14.17□□□□□ -0.14
SQSTM1-215ENST00000514093 ZNF486Q96H40 463 aaPredicted RBP14.17□□□□□ -0.14
SQSTM1-215ENST00000514093 C20orf173Q96LM9 149 aa14.17□□□□□ -0.14
SQSTM1-215ENST00000514093 IGF2BP2-AS1Q96M15 143 aa14.17□□□□□ -0.14
SQSTM1-215ENST00000514093 VCX3BQ9H321 246 aa14.17□□□□□ -0.14
SQSTM1-215ENST00000514093 CEBPZOSA8MTT3 80 aa14.16□□□□□ -0.14
SQSTM1-215ENST00000514093 CLINT1Q14677 625 aa14.16□□□□□ -0.14
SQSTM1-215ENST00000514093 ETFRF1Q6IPR1 90 aa14.16□□□□□ -0.14
SQSTM1-215ENST00000514093 CROCCP3Q8IVE0 287 aa14.16□□□□□ -0.14
SQSTM1-215ENST00000514093 OR52E5Q8NH55 327 aa14.16□□□□□ -0.14
SQSTM1-215ENST00000514093 RNF141Q8WVD5 230 aa14.16□□□□□ -0.14
SQSTM1-215ENST00000514093 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.16□□□□□ -0.14
SQSTM1-215ENST00000514093 RAB26Q9ULW5 256 aa14.16□□□□□ -0.14
SQSTM1-215ENST00000514093 UCP1P25874 307 aa14.15□□□□□ -0.14
SQSTM1-215ENST00000514093 RNASE12Q5GAN4 147 aaKnown RBP14.15□□□□□ -0.14
SQSTM1-215ENST00000514093 AMTNQ6UX39 209 aa14.15□□□□□ -0.14
SQSTM1-215ENST00000514093 LHFPL1Q86WI0 220 aa14.15□□□□□ -0.14
SQSTM1-215ENST00000514093 UHRF2Q96PU4 802 aa14.15□□□□□ -0.14
SQSTM1-215ENST00000514093 COPZ2Q9P299 210 aa14.15□□□□□ -0.14
SQSTM1-215ENST00000514093 AZU1P20160 251 aa14.14□□□□□ -0.15
SQSTM1-215ENST00000514093 FUSP35637 526 aaKnown RBP eCLIP14.14□□□□□ -0.154e-7■■■□□ 15.3
SQSTM1-215ENST00000514093 ZNF90Q03938 601 aa14.14□□□□□ -0.15
SQSTM1-215ENST00000514093 NEDD8Q15843 81 aa14.14□□□□□ -0.15
SQSTM1-215ENST00000514093 AARDQ4LEZ3 155 aa14.14□□□□□ -0.15
SQSTM1-215ENST00000514093 DOK5Q9P104 306 aa14.14□□□□□ -0.15
SQSTM1-215ENST00000514093 CACNG5Q9UF02 275 aa14.14□□□□□ -0.15
SQSTM1-215ENST00000514093 M0R2Z0 102 aa14.13□□□□□ -0.15
SQSTM1-215ENST00000514093 ISLRO14498 428 aa14.13□□□□□ -0.15
SQSTM1-215ENST00000514093 ATP5G1P05496 136 aa14.13□□□□□ -0.15
SQSTM1-215ENST00000514093 NUP62P37198 522 aaPredicted RBP14.13□□□□□ -0.15
SQSTM1-215ENST00000514093 ATP5G3P48201 142 aa14.13□□□□□ -0.15
SQSTM1-215ENST00000514093 SPINK13Q1W4C9 94 aa14.13□□□□□ -0.15
SQSTM1-215ENST00000514093 OR8G2PQ6IF36 304 aa14.13□□□□□ -0.15
SQSTM1-215ENST00000514093 LHFPL5Q8TAF8 219 aa14.13□□□□□ -0.15
SQSTM1-215ENST00000514093 ABHD1Q96SE0 405 aa14.13□□□□□ -0.15
SQSTM1-215ENST00000514093 RPRMQ9NS64 109 aa14.13□□□□□ -0.15
SQSTM1-215ENST00000514093 PFDN2Q9UHV9 154 aa14.13□□□□□ -0.15
SQSTM1-215ENST00000514093 MYCBP2O75592 4640 aa14.12□□□□□ -0.15
SQSTM1-215ENST00000514093 SMIM31A0A1B0GVY4 71 aa14.12□□□□□ -0.15
SQSTM1-215ENST00000514093 PLAC8L1A1L4L8 177 aa14.12□□□□□ -0.15
SQSTM1-215ENST00000514093 CRXO43186 299 aaPredicted RBP14.12□□□□□ -0.15
SQSTM1-215ENST00000514093 LYZP61626 148 aa14.12□□□□□ -0.15
SQSTM1-215ENST00000514093 LSM3P62310 102 aaKnown RBP14.12□□□□□ -0.15
SQSTM1-215ENST00000514093 SUPT4H1P63272 117 aaKnown RBP14.12□□□□□ -0.15
SQSTM1-215ENST00000514093 MEF2DQ14814 521 aa14.12□□□□□ -0.15
SQSTM1-215ENST00000514093 OR4C16Q8NGL9 310 aa14.12□□□□□ -0.15
SQSTM1-215ENST00000514093 C16orf92Q96LL3 132 aa14.12□□□□□ -0.15
SQSTM1-215ENST00000514093 COMMD3Q9UBI1 195 aa14.12□□□□□ -0.15
SQSTM1-215ENST00000514093 KLF9Q13886 244 aaPredicted RBP14.11□□□□□ -0.15
SQSTM1-215ENST00000514093 OR8I2Q8N0Y5 310 aa14.11□□□□□ -0.15
SQSTM1-215ENST00000514093 LYPD1Q8N2G4 141 aa14.11□□□□□ -0.15
SQSTM1-215ENST00000514093 CCDC71LQ8N9Z2 235 aa14.11□□□□□ -0.15
SQSTM1-215ENST00000514093 PPP1R14BQ96C90 147 aa14.11□□□□□ -0.15
SQSTM1-215ENST00000514093 CBY3A6NI87 242 aa14.1□□□□□ -0.15
SQSTM1-215ENST00000514093 ZFP92A6NM28 416 aa14.1□□□□□ -0.15
SQSTM1-215ENST00000514093 A8MTW9 85 aa14.1□□□□□ -0.15
SQSTM1-215ENST00000514093 INSP01308 110 aa14.1□□□□□ -0.15
SQSTM1-215ENST00000514093 CD3DP04234 171 aa14.1□□□□□ -0.15
SQSTM1-215ENST00000514093 OR5AC1P0C628 307 aa14.1□□□□□ -0.15
SQSTM1-215ENST00000514093 BTF3P20290 206 aaKnown RBP14.1□□□□□ -0.15
SQSTM1-215ENST00000514093 RNASE10Q5GAN6 216 aaKnown RBP14.1□□□□□ -0.15
SQSTM1-215ENST00000514093 C1orf194Q5T5A4 169 aa14.1□□□□□ -0.15
SQSTM1-215ENST00000514093 FAM219AQ8IW50 185 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms