RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 BPIFCQ8NFQ6 507 aa11.4□□□□□ -0.58
NUP54-213ENST00000513352 OR51G1Q8NGK1 321 aa11.4□□□□□ -0.58
NUP54-213ENST00000513352 AQP10Q96PS8 301 aa11.4□□□□□ -0.58
NUP54-213ENST00000513352 GPR61Q9BZJ8 451 aa11.4□□□□□ -0.58
NUP54-213ENST00000513352 FBXL17Q9UF56 701 aa11.4□□□□□ -0.58
NUP54-213ENST00000513352 TNFSF18Q9UNG2 199 aa11.4□□□□□ -0.58
NUP54-213ENST00000513352 SELENOKQ9Y6D0 94 aa11.4□□□□□ -0.58
NUP54-213ENST00000513352 TMEM213A2RRL7 107 aa11.39□□□□□ -0.59
NUP54-213ENST00000513352 AGPAT2O15120 278 aa11.39□□□□□ -0.59
NUP54-213ENST00000513352 IFNA5P01569 189 aa11.39□□□□□ -0.59
NUP54-213ENST00000513352 CSN3P07498 182 aa11.39□□□□□ -0.59
NUP54-213ENST00000513352 FOLR2P14207 255 aa11.39□□□□□ -0.59
NUP54-213ENST00000513352 GATA2P23769 480 aaPredicted RBP11.39□□□□□ -0.59
NUP54-213ENST00000513352 VWC2Q2TAL6 325 aa11.39□□□□□ -0.59
NUP54-213ENST00000513352 OXLD1Q5BKU9 147 aa11.39□□□□□ -0.59
NUP54-213ENST00000513352 TCTE3Q8IZS6 198 aa11.39□□□□□ -0.59
NUP54-213ENST00000513352 NARS2Q96I59 477 aaKnown RBP11.39□□□□□ -0.59
NUP54-213ENST00000513352 ZNF414Q96IQ9 312 aa11.39□□□□□ -0.59
NUP54-213ENST00000513352 METTL26Q96S19 204 aa11.39□□□□□ -0.59
NUP54-213ENST00000513352 MFFQ9GZY8 342 aa11.39□□□□□ -0.59
NUP54-213ENST00000513352 ZFAND3Q9H8U3 227 aa11.39□□□□□ -0.59
NUP54-213ENST00000513352 WDR83OSQ9Y284 106 aa11.39□□□□□ -0.59
NUP54-213ENST00000513352 IGHV3OR16-13A0A075B7E8 117 aa11.38□□□□□ -0.59
NUP54-213ENST00000513352 IGHV3-74A0A0B4J1X5 117 aa11.38□□□□□ -0.59
NUP54-213ENST00000513352 RNF222A6NCQ9 220 aa11.38□□□□□ -0.59
NUP54-213ENST00000513352 CBLN1P23435 193 aa11.38□□□□□ -0.59
NUP54-213ENST00000513352 NPPCP23582 126 aa11.38□□□□□ -0.59
NUP54-213ENST00000513352 CAMLGP49069 296 aa11.38□□□□□ -0.59
NUP54-213ENST00000513352 ELLP55199 621 aaPredicted RBP11.38□□□□□ -0.59
NUP54-213ENST00000513352 SCGB1C1Q8TD33 95 aa11.38□□□□□ -0.59
NUP54-213ENST00000513352 PPP1R14BQ96C90 147 aa11.38□□□□□ -0.59
NUP54-213ENST00000513352 RNF125Q96EQ8 232 aa11.38□□□□□ -0.59
NUP54-213ENST00000513352 MGST2Q99735 147 aa11.38□□□□□ -0.59
NUP54-213ENST00000513352 DOK5Q9P104 306 aa11.38□□□□□ -0.59
NUP54-213ENST00000513352 IGHV3-66A0A0C4DH42 116 aa11.37□□□□□ -0.59
NUP54-213ENST00000513352 G3V4G9 280 aa11.37□□□□□ -0.59
NUP54-213ENST00000513352 K7EMT4 169 aa11.37□□□□□ -0.59
NUP54-213ENST00000513352 LINC00869P0C866 280 aa11.37□□□□□ -0.59
NUP54-213ENST00000513352 ORM2P19652 201 aa11.37□□□□□ -0.59
NUP54-213ENST00000513352 BMI1P35226 326 aa11.37□□□□□ -0.59
NUP54-213ENST00000513352 SELENOTP62341 195 aa11.37□□□□□ -0.59
NUP54-213ENST00000513352 USF2Q15853 346 aaPredicted RBP11.37□□□□□ -0.59
NUP54-213ENST00000513352 IL34Q6ZMJ4 242 aa11.37□□□□□ -0.59
NUP54-213ENST00000513352 ZNF709Q8N972 641 aa11.37□□□□□ -0.59
NUP54-213ENST00000513352 OR11H4Q8NGC9 324 aa11.37□□□□□ -0.59
NUP54-213ENST00000513352 OR1B1Q8NGR6 318 aa11.37□□□□□ -0.59
NUP54-213ENST00000513352 MARC2Q969Z3 335 aa11.37□□□□□ -0.59
NUP54-213ENST00000513352 GGTLC1Q9BX51 225 aa11.37□□□□□ -0.59
NUP54-213ENST00000513352 WFDC1Q9HC57 220 aa11.37□□□□□ -0.59
NUP54-213ENST00000513352 RABAC1Q9UI14 185 aa11.37□□□□□ -0.59
NUP54-213ENST00000513352 LSM4Q9Y4Z0 139 aaKnown RBP11.37□□□□□ -0.59
NUP54-213ENST00000513352 IGHV7-4-1A0A0J9YVY3 117 aa11.36□□□□□ -0.59
NUP54-213ENST00000513352 WI2-2373I1.2A0A1W2PRP0 233 aa11.36□□□□□ -0.59
NUP54-213ENST00000513352 MPDU1O75352 247 aa11.36□□□□□ -0.59
NUP54-213ENST00000513352 CFDP00746 253 aaPredicted RBP11.36□□□□□ -0.59
NUP54-213ENST00000513352 HNRNPCP07910 306 aaKnown RBP eCLIP11.36□□□□□ -0.59
NUP54-213ENST00000513352 INSL3P51460 131 aa11.36□□□□□ -0.59
NUP54-213ENST00000513352 TMEM182Q6ZP80 229 aaPredicted RBP11.36□□□□□ -0.59
NUP54-213ENST00000513352 WDR61Q9GZS3 305 aaKnown RBP11.36□□□□□ -0.59
NUP54-213ENST00000513352 MRPL27Q9P0M9 148 aaKnown RBP11.36□□□□□ -0.59
NUP54-213ENST00000513352 SLC45A2Q9UMX9 530 aa11.36□□□□□ -0.59
NUP54-213ENST00000513352 PKD1L1Q8TDX9 2849 aa11.36□□□□□ -0.59
NUP54-213ENST00000513352 TRRAPQ9Y4A5 3859 aa11.35□□□□□ -0.59
NUP54-213ENST00000513352 OR5G3P0C626 314 aa11.35□□□□□ -0.59
NUP54-213ENST00000513352 EIF2B2P49770 351 aaKnown RBP11.35□□□□□ -0.59
NUP54-213ENST00000513352 CD300CQ08708 224 aa11.35□□□□□ -0.59
NUP54-213ENST00000513352 ZNF266Q14584 549 aa11.35□□□□□ -0.59
NUP54-213ENST00000513352 MIC13Q5XKP0 118 aa11.35□□□□□ -0.59
NUP54-213ENST00000513352 ADAMTSL5Q6ZMM2 481 aa11.35□□□□□ -0.59
NUP54-213ENST00000513352 RHPN1-AS1Q9BWJ2 59 aa11.35□□□□□ -0.59
NUP54-213ENST00000513352 NPCDR1Q9BY65 106 aa11.35□□□□□ -0.59
NUP54-213ENST00000513352 SIGLEC8Q9NYZ4 499 aa11.35□□□□□ -0.59
NUP54-213ENST00000513352 MLXQ9UH92 298 aa11.35□□□□□ -0.59
NUP54-213ENST00000513352 SMPXQ9UHP9 88 aa11.35□□□□□ -0.59
NUP54-213ENST00000513352 PFDN2Q9UHV9 154 aa11.35□□□□□ -0.59
NUP54-213ENST00000513352 DNHD1Q96M86 4753 aa11.35□□□□□ -0.59
NUP54-213ENST00000513352 BORCS7-ASMTA0A0B4J1R7 106 aa11.34□□□□□ -0.59
NUP54-213ENST00000513352 A0A1W2PS18 150 aa11.34□□□□□ -0.59
NUP54-213ENST00000513352 HMSDA8MTL9 139 aa11.34□□□□□ -0.59
NUP54-213ENST00000513352 C17orf112F2Z3M2 114 aa11.34□□□□□ -0.59
NUP54-213ENST00000513352 COX7A2P2O60397 106 aa11.34□□□□□ -0.59
NUP54-213ENST00000513352 HYPMO75409 117 aa11.34□□□□□ -0.59
NUP54-213ENST00000513352 C1QBP02746 253 aa11.34□□□□□ -0.59
NUP54-213ENST00000513352 APOHP02749 345 aaPredicted RBP11.34□□□□□ -0.59
NUP54-213ENST00000513352 B2MP61769 119 aa11.34□□□□□ -0.59
NUP54-213ENST00000513352 OPCMLQ14982 345 aa11.34□□□□□ -0.59
NUP54-213ENST00000513352 ZFP69Q49AA0 526 aa11.34□□□□□ -0.59
NUP54-213ENST00000513352 STPG3Q8N7X2 389 aa11.34□□□□□ -0.59
NUP54-213ENST00000513352 ST8SIA2Q92186 375 aa11.34□□□□□ -0.59
NUP54-213ENST00000513352 GRAMD2BQ96HH9 432 aa11.34□□□□□ -0.59
NUP54-213ENST00000513352 RSG1Q9BU20 258 aa11.34□□□□□ -0.59
NUP54-213ENST00000513352 ARL6Q9H0F7 186 aa11.34□□□□□ -0.59
NUP54-213ENST00000513352 TMEM231Q9H6L2 316 aa11.34□□□□□ -0.59
NUP54-213ENST00000513352 KCNIP2Q9NS61 270 aa11.34□□□□□ -0.59
NUP54-213ENST00000513352 TECRQ9NZ01 308 aaKnown RBP11.34□□□□□ -0.59
NUP54-213ENST00000513352 PXMP4Q9Y6I8 212 aa11.34□□□□□ -0.59
NUP54-213ENST00000513352 CHEK1O14757 476 aa11.33□□□□□ -0.6
NUP54-213ENST00000513352 C8orf88P0DMB2 117 aa11.33□□□□□ -0.6
NUP54-213ENST00000513352 CRYBB3P26998 211 aa11.33□□□□□ -0.6
NUP54-213ENST00000513352 CD300EQ496F6 205 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms