RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 ECI1P42126 302 aa7.06□□□□□ -1.28
LIMCH1-209ENST00000509277 RPL39P5Q59GN2 51 aa7.06□□□□□ -1.28
LIMCH1-209ENST00000509277 MMD2Q8IY49 270 aa7.06□□□□□ -1.28
LIMCH1-209ENST00000509277 FOXI3A8MTJ6 420 aaPredicted RBP7.06□□□□□ -1.28
LIMCH1-209ENST00000509277 CFPP27918 469 aa7.06□□□□□ -1.28
LIMCH1-209ENST00000509277 FCER1GP30273 86 aa7.06□□□□□ -1.28
LIMCH1-209ENST00000509277 GPR12P47775 334 aa7.06□□□□□ -1.28
LIMCH1-209ENST00000509277 MFAP2P55001 183 aa7.06□□□□□ -1.28
LIMCH1-209ENST00000509277 RPL8P62917 257 aaKnown RBP7.06□□□□□ -1.28
LIMCH1-209ENST00000509277 PSG9Q00887 426 aa7.06□□□□□ -1.28
LIMCH1-209ENST00000509277 SLC35E4Q6ICL7 350 aa7.06□□□□□ -1.28
LIMCH1-209ENST00000509277 SFTA2Q6UW10 78 aa7.06□□□□□ -1.28
LIMCH1-209ENST00000509277 PXMP4Q9Y6I8 212 aa7.06□□□□□ -1.28
LIMCH1-209ENST00000509277 NDUFS8O00217 210 aa7.05□□□□□ -1.28
LIMCH1-209ENST00000509277 ADH4P08319 380 aa7.05□□□□□ -1.28
LIMCH1-209ENST00000509277 GATA2P23769 480 aaPredicted RBP7.05□□□□□ -1.28
LIMCH1-209ENST00000509277 ZNF138P52744 262 aa7.05□□□□□ -1.28
LIMCH1-209ENST00000509277 GNB1P62873 340 aa7.05□□□□□ -1.28
LIMCH1-209ENST00000509277 SLC45A2Q9UMX9 530 aa7.05□□□□□ -1.28
LIMCH1-209ENST00000509277 DSCAML1Q8TD84 2053 aa7.05□□□□□ -1.28
LIMCH1-209ENST00000509277 IGLL1P15814 213 aa7.05□□□□□ -1.28
LIMCH1-209ENST00000509277 ZFP36P26651 326 aaKnown RBP7.05□□□□□ -1.28
LIMCH1-209ENST00000509277 CFHR2P36980 270 aa7.05□□□□□ -1.28
LIMCH1-209ENST00000509277 DNLZQ5SXM8 178 aa7.05□□□□□ -1.28
LIMCH1-209ENST00000509277 PQLC2Q6ZP29 291 aa7.05□□□□□ -1.28
LIMCH1-209ENST00000509277 TMEM186Q96B77 213 aa7.05□□□□□ -1.28
LIMCH1-209ENST00000509277 A0A1W2PN81 502 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 K7EMI3 77 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 GPX1P07203 203 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 ARL14EPLP0DKL9 152 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 SRP14P37108 136 aaKnown RBP7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 LGALS4P56470 323 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 TEX36Q5VZQ5 186 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 TEX43Q6ZNM6 134 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 WFDC11Q8NEX6 87 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 OR5B3Q8NH48 314 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 NUDT16L1Q9BRJ7 211 aaKnown RBP7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 CTXND1A0A1B0GTU2 59 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 OR4C46A6NHA9 309 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 FCN3O75636 299 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 WNT2P09544 360 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 HES1Q14469 280 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 RPEL1Q2QD12 228 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 DEFB113Q30KQ7 82 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 MIC13Q5XKP0 118 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 BRD3OSQ6XYD6 125 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 IL17RELQ6ZVW7 336 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 SMIM12Q96EX1 92 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 TMEM56Q96MV1 263 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 TMEM242Q9NWH2 141 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 RPUSD1Q9UJJ7 312 aaKnown RBP7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 NPPCP23582 126 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 NPY1RP25929 384 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 WFDC3Q8IUB2 231 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 OR4P4Q8NGL7 312 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 HSPB7Q9UBY9 170 aa7.04□□□□□ -1.28
LIMCH1-209ENST00000509277 TRAV8-6A0A0B4J262 113 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 KBTBD11-OT1A0A1B0GTJ5 212 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 ISLRO14498 428 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 PGLYRP1O75594 196 aaPredicted RBP7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 CA2P00918 260 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 CRYBB3P26998 211 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 FXYD7P58549 80 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 MOB1BQ7L9L4 216 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 LHFPL4Q7Z7J7 247 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 MOB3BQ86TA1 216 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 ABHD12Q8N2K0 398 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 OR1B1Q8NGR6 318 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 RAB40CQ96S21 281 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 OR2W1Q9Y3N9 320 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 TNCP24821 2201 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 IGHV2-70DA0A0C4DH43 119 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 FCGR3BO75015 233 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 S1PR2O95136 353 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 IGHV3-48P01763 117 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 LIPFP07098 398 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 F2RP25116 425 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 TNXAQ16473 311 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 VKORC1L1Q8N0U8 176 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 KCNS1Q96KK3 526 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 P2RX4Q99571 388 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 TMEM140Q9NV12 185 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 IDI2-AS1Q9NZ38 188 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 F8P00451 2351 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 C7orf71A4D174 169 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 ZNF324O75467 553 aaPredicted RBP7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 CTXN2P0C2S0 81 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 GNG4P50150 75 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 PAX9P55771 341 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 DIAPH2-AS1Q14236 149 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 TIGITQ495A1 244 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 C7orf69Q9H7B7 122 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 HIF1ANQ9NWT6 349 aa7.03□□□□□ -1.28
LIMCH1-209ENST00000509277 A0A1W2PS18 150 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 OVOL3O00110 214 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 APCSP02743 223 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 UCP1P25874 307 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 C10orf105Q8TEF2 133 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 TP53TG3Q9ULZ0 132 aa7.02□□□□□ -1.29
LIMCH1-209ENST00000509277 APELAP0DMC3 54 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms